Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD16G1250300 Malus domestica HOM05D006842 ORTHO05D008908 1.7e-140 502.7 254 100.0
Prupe.1G077100 Prunus persica HOM05D006842 ORTHO05D008908 2.7e-74 282.7 268 60.4
FvH4_4g07420 Fragaria vesca HOM05D006842 ORTHO05D008908 4.5e-69 265.4 247 57.5
FAN12G0114 Fragaria x ananassa HOM05D006842 ORTHO05D008908 4.5e-69 265.4 247 57.5
RcHm_v2.0_Chr4g0399881 Rosa chinensis HOM05D006842 ORTHO05D008908 2.9e-68 262.7 258 57.4
MD13G1243700 Malus domestica HOM05D006842 ORTHO05D008908 6.5e-68 261.5 264 58.7
CiPaw.16G087400 Carya illinoinensis HOM05D006842 ORTHO05D008908 2.4e-62 243.0 253 55.3
FAN07G2675 Fragaria x ananassa HOM05D006842 ORTHO05D008908 5.6e-59 231.9 258 51.9
Cpa.g.sc95.19 Carica papaya HOM05D006842 ORTHO05D008908 1.6e-58 230.3 263 48.7
CANSAT11G0234 Cannabis sativa HOM05D006842 ORTHO05D008908 2.8e-58 229.6 247 53.8
TAR626G0090 Trochodendron aralioides HOM05D006842 ORTHO05D008908 2.6e-56 223.0 261 49.4
Thecc.09G184100 Theobroma cacao HOM05D006842 ORTHO05D008908 5.7e-56 221.9 252 50.0
Potri.018G143800 Populus trichocarpa HOM05D006842 ORTHO05D008908 7.5e-56 221.5 243 51.0
ClCG11G011810 Citrullus lanatus HOM05D006842 ORTHO05D008908 1.1e-54 217.6 262 47.7
CsaV3_2G008680 Cucumis sativus L. HOM05D006842 ORTHO05D008908 3.5e-53 212.6 262 46.6
Gorai.004G025400 Gossypium raimondii HOM05D006842 ORTHO05D008908 7.8e-53 211.5 237 50.6
PGR142G3186 Punica granatum HOM05D006842 ORTHO05D008908 6.6e-52 208.4 254 50.4
Gohir.A08G017700 Gossypium hirsutum HOM05D006842 ORTHO05D008908 1.1e-51 207.6 239 49.8
Gohir.D08G028300 Gossypium hirsutum HOM05D006842 ORTHO05D008908 1.9e-51 206.8 237 49.8
vmacro20826 Vaccinium macrocarpon HOM05D006842 ORTHO05D008908 1.9e-51 206.8 243 48.6
Actinidia01285 Actinidia chinensis HOM05D006842 ORTHO05D008908 3.3e-51 206.1 251 46.6
MELO3C003981.2 Cucumis melo HOM05D006842 ORTHO05D008908 3.3e-51 206.1 262 45.0
Sed0020865 Sechium edule HOM05D006842 ORTHO05D008908 9.5e-51 204.5 236 47.9
Rhsim01G0118900 Rhododendron simsii HOM05D006842 ORTHO05D008908 1.6e-50 203.8 248 47.6
AL8G33220 Arabidopsis lyrata HOM05D006842 ORTHO05D008908 6.2e-50 201.8 231 49.4
Nn8g40885 Nelumbo nucifera HOM05D006842 ORTHO05D008908 3.1e-49 199.5 257 47.5
Oeu018814.3 Olea europaea HOM05D006842 ORTHO05D008908 2.0e-48 196.8 241 47.7
AT5G57250 Arabidopsis thaliana HOM05D006842 ORTHO05D008908 5.8e-48 195.3 231 47.6
Carub.0008s1775 Capsella rubella HOM05D006842 ORTHO05D008908 2.9e-47 193.0 231 46.8
Thhalv10012580m.g Eutrema salsugineum HOM05D006842 ORTHO05D008908 2.9e-47 193.0 228 47.4
CARHR271050 Cardamine hirsuta HOM05D006842 ORTHO05D008908 4.9e-47 192.2 232 47.8
Aqoxy7G02761 Aquilegia oxysepala HOM05D006842 ORTHO05D008908 8.3e-47 191.4 240 47.5
Ciclev10010743m.g Citrus clementina HOM05D006842 ORTHO05D008908 8.3e-47 191.4 211 47.9
Sp6g18980 Schrenkiella parvula HOM05D006842 ORTHO05D008908 3.2e-46 189.5 228 45.6
Haze_22005 Corylus avellana HOM05D006842 ORTHO05D008908 9.2e-46 188.0 192 56.2
Atru.chr8.567 Acer truncatum HOM05D006842 ORTHO05D008908 4.6e-45 185.7 251 45.0
Cc06_g21740 Coffea canephora HOM05D006842 ORTHO05D008908 3.0e-44 183.0 240 46.2
Cfa013438 Carpinus fangiana HOM05D006842 ORTHO05D008908 3.9e-44 182.6 192 54.7
Aa31LG3G13140 Aethionema arabicum HOM05D006842 ORTHO05D008908 1.1e-43 181.0 230 45.2
Glyma.15G164700 Glycine max HOM05D006842 ORTHO05D008908 1.9e-43 180.3 230 45.2
Sabra18G0117200 Salix brachista HOM05D006842 ORTHO05D008908 3.6e-42 176.0 127 66.9
Dinv25428 Davidia involucrata HOM05D006842 ORTHO05D008908 4.7e-42 175.6 194 50.0
VMungo1309G0481 Vigna mungo HOM05D006842 ORTHO05D008908 6.2e-42 175.3 235 41.7
SGA_v2.0_scaffold231G43415 Striga asiatica HOM05D006842 ORTHO05D008908 2.3e-41 173.3 232 43.5
MBI13_g31535_MAGBIO Magnolia biondii HOM05D006842 ORTHO05D008908 4.0e-41 172.6 246 42.7
Migut.L01888 Erythranthe guttata HOM05D006842 ORTHO05D008908 5.2e-41 172.2 228 46.1
QL12p035267 Quercus lobata HOM05D006842 ORTHO05D008908 2.0e-40 170.2 118 71.2
arahy.Tifrunner.gnm1.ann1.0YDK6Q Arachis hypogaea HOM05D006842 ORTHO05D008908 5.8e-40 168.7 256 43.0
Phvul.009G237200 Phaseolus vulgaris HOM05D006842 ORTHO05D008908 7.5e-40 168.3 234 41.0
Lalb_Chr11g0074851 Lupinus albus HOM05D006842 ORTHO05D008908 3.2e-38 162.9 251 42.2
Lj5P661T13 Lonicera japonica HOM05D006842 ORTHO05D008908 5.4e-38 162.2 127 63.0
BcaB08g36087 Brassica carinata HOM05D006842 ORTHO05D008908 9.2e-38 161.4 229 45.0
arahy.Tifrunner.gnm1.ann1.25Z6GM Arachis hypogaea HOM05D006842 ORTHO05D008908 6.0e-37 158.7 228 43.4
Lsat_1_v5_gn_7_55601 Lactuca sativa HOM05D006842 ORTHO05D008908 1.3e-36 157.5 243 40.3
MSTRG.26539 Avicennia marina HOM05D006842 ORTHO05D008908 2.3e-36 156.8 234 41.5
COL.COLO4_38436 Corchorus olitorius HOM05D006842 ORTHO05D008908 3.0e-36 156.4 126 58.7
Sopen05g008190 Solanum pennellii HOM05D006842 ORTHO05D008908 5.1e-36 155.6 231 41.1
BcaC04g19984 Brassica carinata HOM05D006842 ORTHO05D008908 9.5e-35 151.4 242 40.9
C09p49110 Brassica napus HOM05D006842 ORTHO05D008908 9.5e-35 151.4 242 40.9
CAN.G272.1 Capsicum annuum HOM05D006842 ORTHO05D008908 1.2e-34 151.0 221 40.3
Lj6g0009672 Lotus japonicus HOM05D006842 ORTHO05D008908 1.2e-34 151.0 237 42.2
Nitab4.5_0007383g0050 Nicotiana tabacum HOM05D006842 ORTHO05D008908 6.2e-34 148.7 214 41.1
GSVIVG01012780001 Vitis vinifera HOM05D006842 ORTHO05D008908 1.8e-33 147.1 127 59.8
PGSC0003DMG400018607 Solanum tuberosum HOM05D006842 ORTHO05D008908 3.1e-33 146.4 255 38.4
BolC9t57760H Brassica oleracea HOM05D006842 ORTHO05D008908 5.2e-33 145.6 248 38.7
BraA10t43553Z Brassica rapa HOM05D006842 ORTHO05D008908 8.9e-33 144.8 230 42.6
Medtr2g037740 Medicago truncatula HOM05D006842 ORTHO05D008908 1.3e-31 141.0 230 39.1
Hma1.2p1_0314F.1_g121750 Hydrangea macrophylla HOM05D006842 ORTHO05D008908 6.4e-31 138.7 91 72.5
Nitab4.5_0005943g0060 Nicotiana tabacum HOM05D006842 ORTHO05D008908 8.4e-31 138.3 213 39.4
Eucgr.D01013 Eucalyptus grandis HOM05D006842 ORTHO05D008908 1.1e-30 137.9 111 59.5
A10p14700 Brassica napus HOM05D006842 ORTHO05D008908 1.9e-30 137.1 228 40.8
PSO339G1909 Papaver somniferum HOM05D006842 ORTHO05D008908 4.1e-30 136.0 239 38.9
Duzib170G0985 Durio zibethinus HOM05D006842 ORTHO05D008908 2.7e-29 133.3 249 39.8
HPP92_021041 Vanilla planifolia HOM05D006842 ORTHO05D008908 1.7e-28 130.6 241 35.7
Glyma.09G058602 Glycine max HOM05D006842 ORTHO05D008908 6.6e-28 128.6 110 56.4
PSO384G3049 Papaver somniferum HOM05D006842 ORTHO05D008908 9.6e-27 124.8 240 37.5
CSS0012280 Camellia sinensis var. sinensis HOM05D006842 ORTHO05D008908 1.1e-25 121.3 81 67.9
HanXRQChr03g0068361 Helianthus annuus HOM05D006842 ORTHO05D008908 3.2e-22 109.8 248 31.0
CDE02G4182 Ceratophyllum demersum HOM05D006842 ORTHO05D008908 1.0e-20 104.8 89 53.9
Peaxi162Scf00528g00082 Petunia axillaris HOM05D006842 ORTHO05D008908 8.7e-20 101.7 89 55.1
SalBow5G4345 Salvia bowleyana HOM05D006842 ORTHO05D008908 5.8e-16 89.0 92 45.7
Ca_02053_v3 Cicer arietinum L. HOM05D006842 ORTHO05D008908 2.9e-15 86.7 172 32.6
ECA240G2145 Erigeron canadensis HOM05D006842 ORTHO05D008908 1.9e-14 84.0 86 48.8
DCAR_020473 Daucus carota HOM05D006842 ORTHO05D008908 9.3e-14 81.6 75 57.3
Medtr3g103990 Medicago truncatula HOM05D006842 ORTHO05D008908 2.7e-13 80.1 87 43.7
TPR.G30782 Trifolium pratense HOM05D006842 ORTHO05D008908 7.4e-11 72.0 162 32.7
MSTRG.18528 Avicennia marina HOM05D007173 ORTHO05D009151 4.2e-06 56.2 104 33.7
COL.COLO4_06474 Corchorus olitorius HOM05D007173 ORTHO05D009151 4.2e-06 56.2 212 26.4
Os01g0263400 Oryza sativa ssp. japonica HOM05D006842 ORTHO05D008908 5.5e-06 55.8 234 26.1
Os10g0497366 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 5.5e-06 55.8 107 30.8
SMO367G1176 Selaginella moellendorffii HOM05D009701 ORTHO05D000003 7.1e-06 55.5 106 31.1
ATR0626G269 Amborella trichopoda HOM05D006842 ORTHO05D008908 9.3e-06 55.1 125 30.4


User provided reference genes

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