Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD16G1237300 Malus domestica HOM05D000309 ORTHO05D010777 1.3e-16 88.6 44 100.0
Haze_19093 Corylus avellana HOM05D000309 ORTHO05D000271 1.7e-08 61.6 43 69.8
Nitab4.5_0012291g0020 Nicotiana tabacum HOM05D000309 ORTHO05D000271 1.7e-08 61.6 38 78.9
QL11p008205 Quercus lobata HOM05D000309 ORTHO05D000271 5.5e-07 56.6 35 74.3
QL11p008354 Quercus lobata HOM05D000309 ORTHO05D000271 5.5e-07 56.6 35 74.3
Medtr5g008810 Medicago truncatula HOM05D000309 ORTHO05D000271 1.2e-06 55.5 35 71.4
COL.COLO4_07471 Corchorus olitorius HOM05D000309 ORTHO05D000271 1.6e-06 55.1 35 71.4
QL11p008473 Quercus lobata HOM05D000309 ORTHO05D000271 1.6e-06 55.1 35 71.4
Thecc.08G171900 Theobroma cacao HOM05D000309 ORTHO05D000271 1.6e-06 55.1 35 71.4
Thecc.08G175300 Theobroma cacao HOM05D000309 ORTHO05D010777 1.6e-06 55.1 35 71.4
Mapoly0001s0399 Marchantia polymorpha HOM05D000309 ORTHO05D000271 2.1e-06 54.7 35 71.4
Sabra06G0059900 Salix brachista HOM05D000309 ORTHO05D000271 2.1e-06 54.7 35 71.4
Phvul.004G178300 Phaseolus vulgaris HOM05D000309 ORTHO05D000271 2.7e-06 54.3 35 71.4
Phvul.010G013200 Phaseolus vulgaris HOM05D000309 ORTHO05D000271 2.7e-06 54.3 33 75.8
Potri.006G079200 Populus trichocarpa HOM05D000309 ORTHO05D000271 2.7e-06 54.3 35 71.4
Ah.12g056140 Amaranthus hybridus HOM05D000309 ORTHO05D000271 3.6e-06 53.9 35 71.4
Hma1.2p1_0263F.1_g105510 Hydrangea macrophylla HOM05D000309 ORTHO05D000271 3.6e-06 53.9 35 71.4
SGA_v2.0_scaffold14G06983 Striga asiatica HOM05D000309 ORTHO05D000271 3.6e-06 53.9 35 71.4
SGA_v2.0_scaffold31G12713 Striga asiatica HOM05D000309 ORTHO05D000271 3.6e-06 53.9 35 71.4
TPR.G21349 Trifolium pratense HOM05D000309 ORTHO05D000271 3.6e-06 53.9 35 68.6
TPR.G2705 Trifolium pratense HOM05D000309 ORTHO05D000271 3.6e-06 53.9 35 68.6
VMungo0464G1032 Vigna mungo HOM05D000309 ORTHO05D000271 3.6e-06 53.9 35 71.4
Cpa.g.sc176.31 Carica papaya HOM05D000309 ORTHO05D000271 4.7e-06 53.5 31 80.6
Ca_25638_v3 Cicer arietinum L. HOM05D000309 ORTHO05D000271 4.7e-06 53.5 35 68.6
Lalb_Chr22g0361651 Lupinus albus HOM05D000309 ORTHO05D000271 4.7e-06 53.5 35 71.4
SEGI_32788 Sequoiadendron giganteum HOM05D000309 ORTHO05D010777 4.7e-06 53.5 35 68.6
arahy.Tifrunner.gnm1.ann1.F6QEBB Arachis hypogaea HOM05D000309 ORTHO05D000271 6.1e-06 53.1 35 68.6
arahy.Tifrunner.gnm1.ann1.FNNX8Q Arachis hypogaea HOM05D000309 ORTHO05D000271 6.1e-06 53.1 35 68.6
arahy.Tifrunner.gnm1.ann1.GI3VL1 Arachis hypogaea HOM05D000309 ORTHO05D000271 6.1e-06 53.1 35 68.6
arahy.Tifrunner.gnm1.ann1.T5AYFK Arachis hypogaea HOM05D000309 ORTHO05D000271 6.1e-06 53.1 35 68.6
CiPaw.01G094600 Carya illinoinensis HOM05D000309 ORTHO05D000271 6.1e-06 53.1 35 71.4
Migut.J00843 Erythranthe guttata HOM05D000309 ORTHO05D000271 6.1e-06 53.1 35 71.4
Eucgr.G00958 Eucalyptus grandis HOM05D000309 ORTHO05D000271 6.1e-06 53.1 35 68.6
Solyc04g070980.4 Solanum lycopersicum HOM05D000309 ORTHO05D000271 6.1e-06 53.1 35 68.6
Sopen04g026930 Solanum pennellii HOM05D000309 ORTHO05D000271 6.1e-06 53.1 35 68.6
TWI34G1296 Tripterygium wilfordii HOM05D000309 ORTHO05D000271 6.1e-06 53.1 35 68.6
TWI75G1227 Tripterygium wilfordii HOM05D000309 ORTHO05D000271 6.1e-06 53.1 35 68.6
unitig_699.g19400 Utricularia gibba HOM05D000309 ORTHO05D000271 6.1e-06 53.1 35 68.6
Actinidia29980 Actinidia chinensis HOM05D000309 ORTHO05D000271 8.0e-06 52.8 35 68.6
ATR0626G349 Amborella trichopoda HOM05D000309 ORTHO05D000271 8.0e-06 52.8 35 68.6
MSTRG.19399 Avicennia marina HOM05D000309 ORTHO05D000271 8.0e-06 52.8 35 68.6
EL10Ac5g11880 Beta vulgaris HOM05D000309 ORTHO05D000271 8.0e-06 52.8 35 68.6
BcaC01g03148 Brassica carinata HOM05D000309 ORTHO05D000271 8.0e-06 52.8 35 68.6
A03p44730 Brassica napus HOM05D000309 ORTHO05D000271 8.0e-06 52.8 35 68.6
C03p55580 Brassica napus HOM05D000309 ORTHO05D000271 8.0e-06 52.8 35 68.6
BolC3t17835H Brassica oleracea HOM05D000309 ORTHO05D000271 8.0e-06 52.8 35 68.6
BraA03t13608Z Brassica rapa HOM05D000309 ORTHO05D000271 8.0e-06 52.8 35 68.6
AUR62022386 Chenopodium quinoa HOM05D000309 ORTHO05D000271 8.0e-06 52.8 35 68.6
AUR62027296 Chenopodium quinoa HOM05D000309 ORTHO05D000271 8.0e-06 52.8 35 68.6
Cc00_g00030 Coffea canephora HOM05D000309 ORTHO05D000271 8.0e-06 52.8 35 68.6
MELO3C024270.2 Cucumis melo HOM05D000309 ORTHO05D000271 8.0e-06 52.8 35 68.6
CsaV3_7G033590 Cucumis sativus L. HOM05D000309 ORTHO05D000271 8.0e-06 52.8 35 68.6
Thhalv10003155m.g Eutrema salsugineum HOM05D000309 ORTHO05D000271 8.0e-06 52.8 35 68.6
Gohir.A08G015900 Gossypium hirsutum HOM05D000309 ORTHO05D000271 8.0e-06 52.8 35 68.6
Gorai.004G022500 Gossypium raimondii HOM05D000309 ORTHO05D000271 8.0e-06 52.8 35 68.6
Os02g0139700 Oryza sativa ssp. japonica HOM05D000309 ORTHO05D000271 8.0e-06 52.8 35 68.6
SalBow6G0376 Salvia bowleyana HOM05D000309 ORTHO05D000271 8.0e-06 52.8 35 68.6
Sp3g25300 Schrenkiella parvula HOM05D000309 ORTHO05D000271 8.0e-06 52.8 35 68.6
Hund26801 Selenicereus undatus HOM05D000309 ORTHO05D000271 8.0e-06 52.8 35 68.6


User provided reference genes

Program Settings