Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 3.9e-45 184.5 97 100.0
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 8.4e-40 166.8 97 90.7
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 1.9e-36 155.6 97 83.5
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 3.8e-32 141.4 94 76.6
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 3.8e-32 141.4 94 76.6
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 6.4e-32 140.6 97 75.3
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 2.4e-31 138.7 94 74.5
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 7.1e-31 137.1 94 75.5
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 1.6e-30 136.0 94 70.2
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 2.1e-30 135.6 94 74.5
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 6.0e-30 134.0 91 69.2
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 3.0e-29 131.7 91 68.1
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 3.9e-29 131.3 91 68.1
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 5.1e-29 131.0 91 68.1
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 8.7e-29 130.2 91 76.9
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 1.5e-28 129.4 91 69.2
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 3.3e-28 128.3 92 70.7
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 9.6e-28 126.7 91 68.1
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 1.3e-27 126.3 92 66.3
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 1.6e-27 125.9 91 65.9
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 2.1e-27 125.6 79 74.7
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 4.8e-27 124.4 78 75.6
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 6.2e-27 124.0 92 64.1
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 8.1e-27 123.6 91 64.8
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 1.8e-26 122.5 77 75.3
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 2.4e-26 122.1 92 66.3
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 3.1e-26 121.7 91 69.2
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 3.1e-26 121.7 92 64.1
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 4.0e-26 121.3 91 65.9
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 5.3e-26 120.9 97 66.0
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 5.3e-26 120.9 83 72.3
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 6.9e-26 120.6 77 74.0
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 6.9e-26 120.6 82 69.5
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 9.0e-26 120.2 91 71.4
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 1.5e-25 119.4 89 68.5
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 1.5e-25 119.4 95 65.3
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 1.5e-25 119.4 89 67.4
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 1.5e-25 119.4 91 68.1
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 2.0e-25 119.0 93 65.6
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 4.5e-25 117.9 95 62.1
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 5.8e-25 117.5 90 64.4
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 7.6e-25 117.1 90 65.6
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 7.6e-25 117.1 95 64.2
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 9.9e-25 116.7 91 68.1
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 9.9e-25 116.7 91 68.1
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 9.9e-25 116.7 92 63.0
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 1.3e-24 116.3 92 64.1
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 1.7e-24 115.9 91 62.6
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 1.7e-24 115.9 81 67.9
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 1.7e-24 115.9 89 67.4
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 1.7e-24 115.9 82 67.1
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 1.7e-24 115.9 91 60.4
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 2.2e-24 115.5 91 62.6
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 2.2e-24 115.5 77 72.7
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 1.1e-23 113.2 92 63.0
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.1e-23 113.2 91 67.0
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 3.2e-23 111.7 91 64.8
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 4.2e-23 111.3 95 61.1
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 5.5e-23 110.9 92 62.0
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 5.5e-23 110.9 92 62.0
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 5.5e-23 110.9 72 72.2
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 7.1e-23 110.5 92 62.0
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 9.3e-23 110.2 92 62.0
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 1.2e-22 109.8 90 60.0
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 1.2e-22 109.8 95 60.0
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 1.6e-22 109.4 95 62.1
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 1.6e-22 109.4 91 58.2
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 2.7e-22 108.6 90 60.0
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 3.5e-22 108.2 90 58.9
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 4.6e-22 107.8 89 62.9
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 6.0e-22 107.5 71 71.8
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 1.3e-21 106.3 89 60.7
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 1.8e-21 105.9 92 59.8
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 3.0e-21 105.1 89 59.6
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 1.5e-20 102.8 91 61.5
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 1.5e-20 102.8 97 57.7
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 1.5e-20 102.8 69 69.6
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 9.6e-20 100.1 72 66.7
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 1.3e-19 99.8 93 54.8
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 1.3e-19 99.8 109 54.1
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 2.1e-19 99.0 49 89.8
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 3.7e-19 98.2 65 67.7
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 5.3e-18 94.4 77 62.3
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 1.9e-15 85.9 49 85.7
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 9.3e-15 83.6 83 47.0
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 1.0e-13 80.1 83 53.0
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 2.5e-12 75.5 50 66.0
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 5.3e-10 67.8 51 62.7
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 5.3e-10 67.8 55 60.0
Actinidia00065 Actinidia chinensis HOM05D007734 ORTHO05D009807 2.6e-09 65.5 96 43.8
BcaB08g36639 Brassica carinata HOM05D007734 ORTHO05D009807 1.4e-07 59.7 41 65.9
A10p20780 Brassica napus HOM05D007734 ORTHO05D009807 2.1e-06 55.8 46 65.2


User provided reference genes

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