Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD16G1174800 Malus domestica HOM05D003864 ORTHO05D004658 8.2e-216 753.4 378 100.0
MD13G1173800 Malus domestica HOM05D003864 ORTHO05D004658 1.7e-144 516.5 378 72.2
Prupe.1G142000 Prunus persica HOM05D003864 ORTHO05D004658 5.2e-138 495.0 367 70.8
RcHm_v2.0_Chr4g0421021 Rosa chinensis HOM05D003864 ORTHO05D004658 9.3e-119 431.0 392 61.5
FvH4_4g17200 Fragaria vesca HOM05D003864 ORTHO05D004658 2.1e-115 419.9 381 62.7
Haze_01063 Corylus avellana HOM05D003864 ORTHO05D004658 2.9e-112 409.5 385 59.5
Cfa015492 Carpinus fangiana HOM05D003864 ORTHO05D004658 2.1e-110 403.3 382 57.9
GSVIVG01017804001 Vitis vinifera HOM05D003864 ORTHO05D004658 8.7e-109 397.9 341 62.8
Sabra08G0157300 Salix brachista HOM05D003864 ORTHO05D004658 8.1e-107 391.3 370 59.7
CiPaw.02G086600 Carya illinoinensis HOM05D003864 ORTHO05D004658 6.9e-106 388.3 327 63.3
Eucgr.B01266 Eucalyptus grandis HOM05D003864 ORTHO05D004658 6.9e-106 388.3 360 58.9
Lj6A670T81 Lonicera japonica HOM05D003864 ORTHO05D004658 6.9e-106 388.3 340 61.8
Cc03_g02350 Coffea canephora HOM05D003864 ORTHO05D004658 5.8e-105 385.2 312 64.1
ClCG06G005360 Citrullus lanatus HOM05D003864 ORTHO05D004658 1.0e-104 384.4 331 61.6
MELO3C021355.2 Cucumis melo HOM05D003864 ORTHO05D004658 1.0e-104 384.4 331 61.3
TWI53G0015 Tripterygium wilfordii HOM05D003864 ORTHO05D004658 1.0e-104 384.4 319 63.3
TWI53G1008 Tripterygium wilfordii HOM05D003864 ORTHO05D004658 1.7e-104 383.6 345 60.6
Ciclev10005325m.g Citrus clementina HOM05D003864 ORTHO05D004658 2.2e-104 383.3 334 60.8
Potri.008G204700 Populus trichocarpa HOM05D003864 ORTHO05D004658 2.9e-104 382.9 336 61.6
Sed0008062 Sechium edule HOM05D003864 ORTHO05D004658 3.8e-104 382.5 337 61.1
vmacro08202 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 6.5e-104 381.7 325 62.8
CsaV3_6G017400 Cucumis sativus L. HOM05D003864 ORTHO05D004658 1.4e-103 380.6 331 60.4
Peaxi162Scf00033g01410 Petunia axillaris HOM05D003864 ORTHO05D004658 1.4e-103 380.6 336 61.0
Duzib151G0071 Durio zibethinus HOM05D003864 ORTHO05D004658 3.2e-103 379.4 332 60.2
Manes.15G016900 Manihot esculenta HOM05D003864 ORTHO05D004658 4.2e-103 379.0 368 57.3
Thecc.04G277700 Theobroma cacao HOM05D003864 ORTHO05D004658 4.2e-103 379.0 335 61.5
CiPaw.01G152900 Carya illinoinensis HOM05D003864 ORTHO05D004658 7.1e-103 378.3 327 61.8
TAR362G0395 Trochodendron aralioides HOM05D003864 ORTHO05D004658 9.3e-103 377.9 327 63.3
Atru.chr4.2755 Acer truncatum HOM05D003864 ORTHO05D004658 1.2e-102 377.5 328 60.1
TAR633G1069 Trochodendron aralioides HOM05D003864 ORTHO05D004658 1.6e-102 377.1 327 62.4
Lalb_Chr20g0118111 Lupinus albus HOM05D003864 ORTHO05D004658 2.1e-102 376.7 310 63.2
Actinidia23428 Actinidia chinensis HOM05D003864 ORTHO05D004658 4.6e-102 375.6 340 59.4
Gorai.011G185900 Gossypium raimondii HOM05D003864 ORTHO05D004658 1.3e-101 374.0 321 60.7
Manes.03G191300 Manihot esculenta HOM05D003864 ORTHO05D004658 1.3e-101 374.0 327 61.5
Nn4g25986 Nelumbo nucifera HOM05D003864 ORTHO05D004658 2.3e-101 373.2 328 61.6
MSTRG.10054 Avicennia marina HOM05D003864 ORTHO05D004658 3.0e-101 372.9 349 59.0
Peaxi162Scf00386g00316 Petunia axillaris HOM05D003864 ORTHO05D004658 3.0e-101 372.9 325 62.2
Gohir.A10G101440 Gossypium hirsutum HOM05D003864 ORTHO05D004658 1.1e-100 370.9 330 59.4
PGSC0003DMG400030786 Solanum tuberosum HOM05D003864 ORTHO05D004658 1.1e-100 370.9 317 62.1
Gohir.D10G166700 Gossypium hirsutum HOM05D003864 ORTHO05D004658 4.3e-100 369.0 317 61.2
Nitab4.5_0001054g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 4.3e-100 369.0 335 59.1
COL.COLO4_13927 Corchorus olitorius HOM05D003864 ORTHO05D004658 5.7e-100 368.6 328 59.8
arahy.Tifrunner.gnm1.ann1.CLS5KG Arachis hypogaea HOM05D003864 ORTHO05D004658 1.3e-99 367.5 335 60.3
Sed0015457 Sechium edule HOM05D003864 ORTHO05D004658 1.3e-99 367.5 351 57.0
Nitab4.5_0001459g0140 Nicotiana tabacum HOM05D003864 ORTHO05D004658 1.6e-99 367.1 329 60.2
Solyc01g067630.3 Solanum lycopersicum HOM05D003864 ORTHO05D004658 1.6e-99 367.1 320 61.2
Nitab4.5_0004537g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 2.1e-99 366.7 320 61.6
Aqoxy2G03115 Aquilegia oxysepala HOM05D003864 ORTHO05D004658 2.8e-99 366.3 356 57.9
Rhsim02G0013600 Rhododendron simsii HOM05D003864 ORTHO05D004658 1.1e-98 364.4 320 59.1
Nitab4.5_0000784g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 3.1e-98 362.8 330 59.7
CAN.G256.9 Capsicum annuum HOM05D003864 ORTHO05D004658 5.3e-98 362.1 339 58.7
Lalb_Chr18g0055711 Lupinus albus HOM05D003864 ORTHO05D004658 2.6e-97 359.8 317 59.9
Rhsim04G0216400 Rhododendron simsii HOM05D003864 ORTHO05D004658 2.6e-97 359.8 361 56.0
Sc19g0004950 Simmondsia chinensis HOM05D003864 ORTHO05D004658 2.6e-97 359.8 380 53.9
Oeu044793.1 Olea europaea HOM05D003864 ORTHO05D004658 4.5e-97 359.0 299 61.5
Lj4g0016445 Lotus japonicus HOM05D003864 ORTHO05D004658 5.9e-97 358.6 361 55.1
THA.LOC104820237 Tarenaya hassleriana HOM05D003864 ORTHO05D004658 1.0e-96 357.8 354 55.6
Glyma.08G088600 Glycine max HOM05D003864 ORTHO05D004658 2.2e-96 356.7 390 53.6
LjContig00389g0005087 Lotus japonicus HOM05D003864 ORTHO05D004658 2.9e-96 356.3 366 53.8
PSO210G7573 Papaver somniferum HOM05D003864 ORTHO05D004658 2.9e-96 356.3 377 53.3
THA.LOC104821766 Tarenaya hassleriana HOM05D003864 ORTHO05D004658 2.9e-96 356.3 344 55.5
Nn3g21324 Nelumbo nucifera HOM05D003864 ORTHO05D004658 3.8e-96 355.9 340 55.9
Lsat_1_v5_gn_5_56881 Lactuca sativa HOM05D003864 ORTHO05D004658 5.0e-96 355.5 298 63.1
PGR031G0559 Punica granatum HOM05D003864 ORTHO05D004658 5.0e-96 355.5 336 58.0
Phvul.006G161500 Phaseolus vulgaris HOM05D003864 ORTHO05D004658 1.9e-95 353.6 337 57.0
Lalb_Chr07g0188241 Lupinus albus HOM05D003864 ORTHO05D004658 3.2e-95 352.8 383 50.9
Ca_00573_v3 Cicer arietinum L. HOM05D003864 ORTHO05D004658 5.5e-95 352.1 303 60.4
Dinv38324 Davidia involucrata HOM05D003864 ORTHO05D004658 5.5e-95 352.1 301 63.8
Glyma.05G133900 Glycine max HOM05D003864 ORTHO05D004658 7.2e-95 351.7 390 52.3
PSO170G3769 Papaver somniferum HOM05D003864 ORTHO05D004658 1.2e-94 350.9 320 57.5
TPR.G1486 Trifolium pratense HOM05D003864 ORTHO05D004658 1.2e-94 350.9 350 54.9
A03p21870 Brassica napus HOM05D003864 ORTHO05D004658 2.1e-94 350.1 386 52.3
CDE01G0506 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 7.9e-94 348.2 346 53.8
Phvul.002G188400 Phaseolus vulgaris HOM05D003864 ORTHO05D004658 1.0e-93 347.8 394 51.5
Glyma.15G097900 Glycine max HOM05D003864 ORTHO05D004658 2.3e-93 346.7 318 57.9
Psat1g187240 Pisum sativum HOM05D003864 ORTHO05D004658 2.3e-93 346.7 352 55.4
Ca_18234_v3 Cicer arietinum L. HOM05D003864 ORTHO05D004658 3.0e-93 346.3 320 57.2
FAN17G0790 Fragaria x ananassa HOM05D003864 ORTHO05D004658 3.0e-93 346.3 381 53.5
BraA03t11423Z Brassica rapa HOM05D003864 ORTHO05D004658 5.1e-93 345.5 387 52.2
ECA240G1720 Erigeron canadensis HOM05D003864 ORTHO05D004658 5.1e-93 345.5 327 57.5
FAN07G1078 Fragaria x ananassa HOM05D003864 ORTHO05D004658 1.5e-92 344.0 380 53.2
PGR004G1016 Punica granatum HOM05D003864 ORTHO05D004658 1.5e-92 344.0 318 56.3
TPR.G23836 Trifolium pratense HOM05D003864 ORTHO05D004658 1.5e-92 344.0 332 56.3
Medtr4g094742 Medicago truncatula HOM05D003864 ORTHO05D004658 2.5e-92 343.2 325 55.7
Glyma.13G215300 Glycine max HOM05D003864 ORTHO05D004658 4.3e-92 342.4 352 54.0
C03p25940 Brassica napus HOM05D003864 ORTHO05D004658 5.7e-92 342.0 327 55.7
BraA05t19685Z Brassica rapa HOM05D003864 ORTHO05D004658 7.4e-92 341.7 344 54.4
Cpa.g.sc1008.4 Carica papaya HOM05D003864 ORTHO05D004658 9.7e-92 341.3 385 53.5
SGA_v2.0_scaffold57G20242 Striga asiatica HOM05D003864 ORTHO05D004658 1.6e-91 340.5 347 53.9
AL4G36380 Arabidopsis lyrata HOM05D003864 ORTHO05D004658 3.7e-91 339.3 322 56.2
arahy.Tifrunner.gnm1.ann1.ZU35GG Arachis hypogaea HOM05D003864 ORTHO05D004658 8.2e-91 338.2 325 58.2
Medtr2g020190 Medicago truncatula HOM05D003864 ORTHO05D004658 8.2e-91 338.2 331 56.5
Hund20596 Selenicereus undatus HOM05D003864 ORTHO05D004658 1.4e-90 337.4 330 56.4
vmacro15256 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 1.4e-90 337.4 368 51.1
vmacro22597 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 1.4e-90 337.4 368 51.1
Sp4g21430 Schrenkiella parvula HOM05D003864 ORTHO05D004658 4.1e-90 335.9 322 55.6
Migut.G00209 Erythranthe guttata HOM05D003864 ORTHO05D004658 9.1e-90 334.7 327 57.2
Thhalv10016876m.g Eutrema salsugineum HOM05D003864 ORTHO05D004658 1.2e-89 334.3 330 55.8
AT2G39080 Arabidopsis thaliana HOM05D003864 ORTHO05D004658 3.4e-89 332.8 321 55.8
Ah.12g064180 Amaranthus hybridus HOM05D003864 ORTHO05D004658 4.5e-89 332.4 352 53.7
Carub.0004s2113 Capsella rubella HOM05D003864 ORTHO05D004658 4.5e-89 332.4 320 55.3
DCAR_002443 Daucus carota HOM05D003864 ORTHO05D004658 4.5e-89 332.4 373 49.1
DCAR_027110 Daucus carota HOM05D003864 ORTHO05D004658 2.9e-88 329.7 327 55.4
FAN22G0711 Fragaria x ananassa HOM05D003864 ORTHO05D004658 2.9e-88 329.7 387 51.4
EL10Ac6g14524 Beta vulgaris HOM05D003864 ORTHO05D004658 6.5e-88 328.6 350 52.3
BcaB01g03648 Brassica carinata HOM05D003864 ORTHO05D004658 1.2e-86 324.3 387 48.8
Os01g0367100 Oryza sativa ssp. japonica HOM05D003864 ORTHO05D004658 1.8e-85 320.5 314 53.8
SGA_v2.0_scaffold89G27550 Striga asiatica HOM05D003864 ORTHO05D004658 6.7e-85 318.5 344 50.6
CDE05G0625 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 8.8e-85 318.2 329 51.4
VMungo0251G3051 Vigna mungo HOM05D003864 ORTHO05D004658 2.0e-84 317.0 375 48.3
A05p07200 Brassica napus HOM05D003864 ORTHO05D004658 7.4e-84 315.1 344 51.7
Zm00001eb341670 Zea mays HOM05D003864 ORTHO05D004658 3.7e-83 312.8 324 52.5
BolC4t22455H Brassica oleracea HOM05D005803 ORTHO05D008090 1.8e-82 310.5 325 52.0
BcaB02g09145 Brassica carinata HOM05D003864 ORTHO05D004658 4.1e-82 309.3 338 51.5
Zm00001eb131760 Zea mays HOM05D003864 ORTHO05D004658 4.1e-82 309.3 368 47.8
C04p08610 Brassica napus HOM05D003864 ORTHO05D004658 6.9e-82 308.5 331 50.8
BcaC02g12038 Brassica carinata HOM05D003864 ORTHO05D004658 1.2e-81 307.8 325 51.7
ATR0706G015 Amborella trichopoda HOM05D003864 ORTHO05D004658 1.9e-79 300.4 322 51.2
arahy.Tifrunner.gnm1.ann1.858I9V Arachis hypogaea HOM05D003864 ORTHO05D004658 3.2e-79 299.7 381 45.7
arahy.Tifrunner.gnm1.ann1.WPBE4U Arachis hypogaea HOM05D003864 ORTHO05D004658 4.7e-78 295.8 411 43.8
Hma1.2p1_0150F.1_g066600 Hydrangea macrophylla HOM05D003864 ORTHO05D004658 6.1e-78 295.4 264 60.2
Aa31LG5G20520 Aethionema arabicum HOM05D003864 ORTHO05D004658 3.9e-77 292.7 336 46.7
Actinidia00050 Actinidia chinensis HOM05D003864 ORTHO05D004658 1.7e-75 287.3 329 50.5
Dinv44425 Davidia involucrata HOM05D003864 ORTHO05D004658 5.3e-74 282.3 184 78.3
VMungo0540G0878 Vigna mungo HOM05D006883 ORTHO05D008624 1.2e-73 281.2 300 51.7
QL06p007391 Quercus lobata HOM05D003864 ORTHO05D004658 2.2e-72 276.9 243 62.6
HPP92_017180 Vanilla planifolia HOM05D003864 ORTHO05D004658 4.2e-71 272.7 334 46.7
Sopen01g029580 Solanum pennellii HOM05D003864 ORTHO05D004658 4.4e-68 262.7 174 74.1
Solyc06g054530.3 Solanum lycopersicum HOM05D003864 ORTHO05D004658 7.5e-68 261.9 177 72.3
PGSC0003DMG400010656 Solanum tuberosum HOM05D003864 ORTHO05D004658 6.3e-67 258.8 174 73.6
SalBow2G1899 Salvia bowleyana HOM05D003864 ORTHO05D004658 2.4e-66 256.9 163 75.5
Sopen06g019600 Solanum pennellii HOM05D003864 ORTHO05D004658 4.1e-66 256.1 198 64.6
FAN12G3853 Fragaria x ananassa HOM05D003864 ORTHO05D004658 5.3e-66 255.8 379 44.3
Pp3c12_8620 Physcomitrium patens HOM05D003864 ORTHO05D004658 5.3e-66 255.8 314 43.9
Pp3c13_19760 Physcomitrium patens HOM05D003864 ORTHO05D004658 5.9e-65 252.3 309 42.4
MBI19_g26585_MAGBIO Magnolia biondii HOM05D003864 ORTHO05D004658 1.3e-64 251.1 348 42.2
AUR62007746 Chenopodium quinoa HOM05D003864 ORTHO05D004658 6.5e-64 248.8 303 45.2
Mapoly0090s0075 Marchantia polymorpha HOM05D003864 ORTHO05D004658 8.5e-64 248.4 324 46.6
Os01g0367400 Oryza sativa ssp. japonica HOM05D003864 ORTHO05D004658 8.5e-64 248.4 324 42.9
MBI19_g44903_MAGBIO Magnolia biondii HOM05D003864 ORTHO05D004658 1.5e-63 247.7 332 45.5
Psat7g088240 Pisum sativum HOM05D003864 ORTHO05D004658 7.2e-63 245.4 171 69.0
BolC3t14979H Brassica oleracea HOM05D003864 ORTHO05D004658 1.2e-62 244.6 185 65.9
AagrBONN_evm.TU.Sc2ySwM_344.1910 Anthoceros agrestis HOM05D003864 ORTHO05D004658 4.7e-62 242.7 319 45.8
Sc25g0004750 Simmondsia chinensis HOM05D003864 ORTHO05D004658 9.8e-60 235.0 225 55.6
CSS0001944 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 1.8e-58 230.7 218 57.8
CSS0038005 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 2.4e-58 230.3 218 57.3
AUR62002937 Chenopodium quinoa HOM05D003864 ORTHO05D004658 7.0e-58 228.8 321 43.9
unitig_748.g8369 Utricularia gibba HOM05D000472 ORTHO05D000344 1.0e-56 224.9 184 61.4
CARHR133840 Cardamine hirsuta HOM05D003864 ORTHO05D004658 2.5e-55 220.3 219 54.8
SMO356G0587 Selaginella moellendorffii HOM05D003864 ORTHO05D004658 2.5e-55 220.3 298 43.3
CBR_g37156 Chara braunii HOM05D003864 ORTHO05D004658 1.5e-52 211.1 327 38.8
HanXRQChr13g0411231 Helianthus annuus HOM05D003864 ORTHO05D004658 1.4e-45 188.0 135 66.7
CDE12G0924 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 1.3e-43 181.4 132 65.9
SHI00297 Sapria himalayana HOM05D003864 ORTHO05D004658 2.0e-41 174.1 497 30.2
C04p08680 Brassica napus HOM05D003864 ORTHO05D004658 1.1e-39 168.3 208 46.6
MSTRG.21813 Avicennia marina HOM05D003864 ORTHO05D004658 1.6e-38 164.5 107 72.0
SEGI_14152 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 1.5e-36 157.9 131 58.0
MCO15G076 Micromonas commoda HOM05D003864 ORTHO05D004658 3.2e-34 150.2 297 32.7
QL06p007393 Quercus lobata HOM05D003864 ORTHO05D004658 7.0e-34 149.1 82 82.9
Cre13.g608000 Chlamydomonas reinhardtii HOM05D003864 ORTHO05D004658 6.0e-33 146.0 332 33.7
CSS0011053 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 5.0e-32 142.9 97 68.0
CSS0003637 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 1.1e-31 141.7 126 57.9
PRCOL_00006073 Prasinoderma coloniale HOM05D003864 ORTHO05D004658 4.7e-30 136.3 382 28.3
CDE12G0314 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 3.1e-29 133.7 86 73.3
CSS0041699 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 2.6e-28 130.6 149 51.0
HanXRQChr13g0411221 Helianthus annuus HOM05D003864 ORTHO05D004658 2.6e-28 130.6 86 70.9
SEGI_31487 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 4.4e-28 129.8 90 63.3
unitig_748.g8370 Utricularia gibba HOM05D003864 ORTHO05D004658 7.5e-28 129.0 90 62.2
BcaC02g12030 Brassica carinata HOM05D003864 ORTHO05D004658 1.4e-26 124.8 86 65.1
BcaNung07183 Brassica carinata HOM05D005803 ORTHO05D008090 8.6e-24 115.5 84 65.5
BolC4t22460H Brassica oleracea HOM05D003864 ORTHO05D004658 1.9e-23 114.4 171 40.9
Actinidia25721 Actinidia chinensis HOM05D003864 ORTHO05D004658 1.3e-19 101.7 60 73.3
RcHm_v2.0_Chr4g0421081 Rosa chinensis HOM05D003864 ORTHO05D004658 1.4e-18 98.2 60 76.7
RcHm_v2.0_Chr4g0421071 Rosa chinensis HOM05D003864 ORTHO05D004658 6.0e-17 92.8 175 38.3
CSS0015623 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 4.3e-15 86.7 50 76.0
Zm00001eb400060 Zea mays HOM05D003864 ORTHO05D004658 4.9e-11 73.2 57 63.2
Dinv02075 Davidia involucrata HOM05D003864 ORTHO05D035062 4.2e-10 70.1 55 58.2
Dinv08007 Davidia involucrata HOM05D003864 ORTHO05D035062 2.7e-09 67.4 53 58.5
Medtr8g027510 Medicago truncatula HOM05D003864 ORTHO05D004658 1.7e-08 64.7 39 84.6


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