Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD16G1133700 Malus domestica HOM05D009101 ORTHO05D011226 1.7e-86 322.8 180 100.0
MD13G1137900 Malus domestica HOM05D009101 ORTHO05D011226 8.2e-41 171.0 168 69.0
FvH4_4g21731 Fragaria vesca HOM05D009101 ORTHO05D011226 3.8e-38 162.2 182 56.0
RcHm_v2.0_Chr4g0427931 Rosa chinensis HOM05D009101 ORTHO05D011226 5.0e-38 161.8 177 58.2
FAN12G1764 Fragaria x ananassa HOM05D009101 ORTHO05D011226 3.2e-37 159.1 182 55.5
RcHm_v2.0_Chr4g0427961 Rosa chinensis HOM05D009101 ORTHO05D011226 2.7e-36 156.0 177 57.1
FAN07G2413 Fragaria x ananassa HOM05D009101 ORTHO05D011226 3.2e-29 132.5 193 48.7
Nn4g25278 Nelumbo nucifera HOM05D009101 ORTHO05D011226 3.1e-24 115.9 125 52.0
Cfa015746 Carpinus fangiana HOM05D009101 ORTHO05D011226 4.3e-21 105.5 127 55.1
MBI18_g39665_MAGBIO Magnolia biondii HOM05D009101 ORTHO05D011226 1.2e-20 104.0 175 42.3
Eucgr.H04137 Eucalyptus grandis HOM05D009101 ORTHO05D011226 6.1e-20 101.7 165 46.7
Glyma.09G080400 Glycine max HOM05D009101 ORTHO05D011226 1.4e-19 100.5 127 51.2
CANSAT78G2401 Cannabis sativa HOM05D009101 ORTHO05D011226 1.8e-19 100.1 93 58.1
ATR0796G016 Amborella trichopoda HOM05D009101 ORTHO05D011226 2.3e-19 99.8 129 51.2
CiPaw.01G127500 Carya illinoinensis HOM05D009101 ORTHO05D011226 4.0e-19 99.0 129 50.4
Actinidia08061 Actinidia chinensis HOM05D009101 ORTHO05D011226 3.4e-18 95.9 130 47.7
Dinv29494 Davidia involucrata HOM05D009101 ORTHO05D011226 3.4e-18 95.9 156 44.9
Potri.010G003700 Populus trichocarpa HOM05D009101 ORTHO05D011226 2.4e-16 89.7 125 50.4
Medtr2g045060 Medicago truncatula HOM05D009101 ORTHO05D011226 3.2e-16 89.4 165 40.6
Rhsim12G0024800 Rhododendron simsii HOM05D009101 ORTHO05D011226 3.2e-16 89.4 132 47.0
GSVIVG01017702001 Vitis vinifera HOM05D009101 ORTHO05D011226 3.2e-16 89.4 148 45.9
Hma1.2p1_1067F.1_g253870 Hydrangea macrophylla HOM05D009101 ORTHO05D011226 4.1e-16 89.0 128 48.4
Atru.chr4.3183 Acer truncatum HOM05D009101 ORTHO05D011226 7.0e-16 88.2 110 50.0
VMungo1309G0395 Vigna mungo HOM05D009101 ORTHO05D011226 9.2e-16 87.8 122 48.4
PSO170G1471 Papaver somniferum HOM05D009101 ORTHO05D011226 1.2e-15 87.4 124 44.4
Ciclev10005889m.g Citrus clementina HOM05D009101 ORTHO05D011226 2.7e-15 86.3 86 57.0
Phvul.009G220900 Phaseolus vulgaris HOM05D009101 ORTHO05D011226 4.6e-15 85.5 161 42.2
PGR004G1430 Punica granatum HOM05D009101 ORTHO05D011226 1.3e-14 84.0 148 41.9
Lalb_Chr08g0232991 Lupinus albus HOM05D009101 ORTHO05D011226 2.3e-14 83.2 132 43.9
Oeu002209.1 Olea europaea HOM05D009101 ORTHO05D011226 3.9e-14 82.4 146 41.8
QL06p014659 Quercus lobata HOM05D009101 ORTHO05D011226 3.9e-14 82.4 178 39.3
Glyma.15G185900 Glycine max HOM05D009101 ORTHO05D011226 1.1e-13 80.9 113 50.4
Os05g0137600 Oryza sativa ssp. japonica HOM05D009101 ORTHO05D011226 1.9e-13 80.1 92 51.1
Psat1g017160 Pisum sativum HOM05D009101 ORTHO05D011226 1.9e-13 80.1 127 47.2
Ca_02328_v3 Cicer arietinum L. HOM05D009101 ORTHO05D011226 2.1e-12 76.6 72 56.9
SEGI_22717 Sequoiadendron giganteum HOM05D009101 ORTHO05D011226 1.1e-08 64.3 59 50.8
Mapoly0132s0020 Marchantia polymorpha HOM05D002994 ORTHO05D003337 2.0e-07 60.1 104 37.5
Cc09_g03220 Coffea canephora HOM05D002994 ORTHO05D003337 5.0e-06 55.5 138 31.2
Sed0012175 Sechium edule HOM05D002994 ORTHO05D003337 6.6e-06 55.1 80 40.0
AL1G18960 Arabidopsis lyrata HOM05D002994 ORTHO05D003337 8.6e-06 54.7 98 36.7
ClCG07G000990 Citrullus lanatus HOM05D002994 ORTHO05D003337 8.6e-06 54.7 76 42.1


User provided reference genes

Program Settings