Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 1.2e-123 446.4 220 100.0
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 5.1e-77 291.6 340 51.2
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 6.5e-72 274.6 307 51.8
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 1.5e-65 253.4 339 45.4
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 2.0e-65 253.1 337 44.8
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 4.5e-65 251.9 337 45.4
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 1.0e-64 250.8 339 44.8
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 1.3e-64 250.4 336 44.9
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 2.2e-64 249.6 339 44.2
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 2.2e-64 249.6 339 44.2
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 2.9e-64 249.2 335 44.5
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 2.9e-64 249.2 339 44.0
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 1.4e-63 246.9 336 43.5
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 1.9e-63 246.5 337 44.2
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 2.5e-63 246.1 339 44.0
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 3.2e-63 245.7 356 43.0
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 3.2e-63 245.7 357 41.7
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 5.5e-63 245.0 373 40.8
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 7.2e-63 244.6 357 41.7
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 1.2e-62 243.8 337 43.9
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 2.1e-62 243.0 337 44.2
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 3.6e-62 242.3 358 41.1
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 3.6e-62 242.3 338 42.9
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 4.6e-62 241.9 358 41.1
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 7.9e-62 241.1 337 43.0
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 1.4e-61 240.4 340 42.6
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 3.0e-61 239.2 335 43.9
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 1.1e-60 237.3 337 43.0
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 1.1e-60 237.3 349 41.8
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 1.5e-60 236.9 350 41.7
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 1.5e-60 236.9 338 41.7
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 3.3e-60 235.7 337 43.9
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 3.3e-60 235.7 361 41.6
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 4.4e-60 235.3 338 42.6
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 7.4e-60 234.6 339 42.8
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 7.4e-60 234.6 336 42.6
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 9.7e-60 234.2 340 43.2
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 1.7e-59 233.4 359 39.8
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 2.2e-59 233.0 361 39.9
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 2.2e-59 233.0 361 41.3
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 2.8e-59 232.6 339 42.2
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 2.8e-59 232.6 379 39.1
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 2.8e-59 232.6 337 42.1
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 3.7e-59 232.3 359 39.6
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 3.7e-59 232.3 335 43.3
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 4.8e-59 231.9 307 44.0
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 8.2e-59 231.1 335 41.8
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 1.1e-58 230.7 338 43.5
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 1.4e-58 230.3 337 42.1
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 1.8e-58 229.9 282 47.9
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 3.1e-58 229.2 337 41.5
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 4.1e-58 228.8 345 41.2
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 4.1e-58 228.8 337 41.2
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 6.9e-58 228.0 337 41.2
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 6.9e-58 228.0 336 41.4
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 6.9e-58 228.0 345 39.7
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 9.1e-58 227.6 356 39.0
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 9.1e-58 227.6 335 40.9
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 1.2e-57 227.3 347 39.8
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 1.5e-57 226.9 337 40.7
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 1.5e-57 226.9 345 40.9
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 2.6e-57 226.1 348 39.1
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 3.4e-57 225.7 347 40.6
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 3.4e-57 225.7 345 40.3
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 3.4e-57 225.7 356 39.0
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 4.5e-57 225.3 357 39.8
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 5.9e-57 224.9 336 39.9
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 7.7e-57 224.6 335 40.9
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 1.7e-56 223.4 335 40.3
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 6.5e-56 221.5 356 39.0
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 8.5e-56 221.1 336 40.8
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 1.1e-55 220.7 338 39.9
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 1.1e-55 220.7 348 38.5
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 4.2e-55 218.8 348 37.9
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 4.2e-55 218.8 333 39.9
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 4.2e-55 218.8 347 39.2
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 5.5e-55 218.4 136 79.4
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 9.4e-55 217.6 346 37.6
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 1.6e-54 216.9 359 37.3
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 2.7e-54 216.1 336 40.5
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 3.6e-54 215.7 346 38.2
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 3.6e-54 215.7 321 41.4
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 4.7e-54 215.3 370 37.8
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 6.1e-54 214.9 348 37.9
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 1.0e-53 214.2 348 37.4
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 1.4e-53 213.8 367 36.5
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 2.3e-53 213.0 348 37.6
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 3.9e-53 212.2 348 37.6
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 3.9e-53 212.2 348 37.4
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 5.2e-53 211.8 348 37.6
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 6.7e-53 211.5 378 37.6
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 4.4e-52 208.8 144 72.2
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 5.7e-52 208.4 348 37.9
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 4.8e-51 205.3 348 37.9
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 8.2e-51 204.5 368 35.6
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 5.3e-50 201.8 348 37.9
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 1.6e-49 200.3 377 34.7
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 3.8e-48 195.7 377 35.5
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 1.5e-47 193.7 350 35.7
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 3.2e-47 192.6 338 35.8
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 1.7e-43 180.3 310 37.7
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 8.2e-43 177.9 107 80.4
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 1.8e-42 176.8 369 34.7
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 1.3e-40 170.6 414 30.7
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 2.9e-40 169.5 335 30.7
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 1.2e-38 164.1 329 31.9
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 8.0e-38 161.4 340 30.0
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 2.3e-37 159.8 336 32.1
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 4.0e-37 159.1 335 29.9
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 2.6e-36 156.4 292 35.3
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 2.2e-32 143.3 107 69.2
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 1.2e-30 137.5 286 35.3
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 8.0e-30 134.8 260 38.8
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 1.0e-29 134.4 83 72.3
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 4.0e-29 132.5 184 45.7
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 3.4e-28 129.4 80 81.2
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 8.3e-27 124.8 286 32.5
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 7.8e-25 118.2 343 26.5
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 4.3e-23 112.5 344 24.1
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 7.3e-23 111.7 104 56.7
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 6.8e-21 105.1 54 88.9
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 1.7e-19 100.5 54 83.3
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 6.4e-19 98.6 54 81.5
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 2.7e-17 93.2 54 75.9
Duzib268G0110 Durio zibethinus HOM05D005577 ORTHO05D006941 1.5e-15 87.4 83 59.0
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 1.7e-11 73.9 53 58.5
SHI17982 Sapria himalayana HOM05D005577 ORTHO05D006941 1.7e-11 73.9 53 67.9
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 2.3e-08 63.5 30 90.0
arahy.Tifrunner.gnm1.ann1.V8UVVM Arachis hypogaea HOM05D005577 ORTHO05D086716 6.2e-06 55.5 43 58.1


User provided reference genes

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