Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD16G1030400 Malus domestica HOM05D000435 ORTHO05D245648 1.6e-77 292.7 150 100.0
MD13G1027300 Malus domestica HOM05D000435 ORTHO05D007717 1.8e-41 172.9 102 86.3
Prupe.1G322600 Prunus persica HOM05D000435 ORTHO05D007717 5.5e-30 134.8 106 72.6
RcHm_v2.0_Chr4g0440941 Rosa chinensis HOM05D000435 ORTHO05D007717 3.4e-24 115.5 107 63.6
Cfa008583 Carpinus fangiana HOM05D000435 ORTHO05D007717 2.2e-18 96.3 116 51.7
CiPaw.06G013200 Carya illinoinensis HOM05D000435 ORTHO05D007717 2.4e-17 92.8 119 51.3
VMungo0720G0078 Vigna mungo HOM05D000435 ORTHO05D007717 6.9e-17 91.3 103 55.3
Actinidia31981 Actinidia chinensis HOM05D000435 ORTHO05D007717 1.0e-15 87.4 103 51.5
Glyma.10G264900 Glycine max HOM05D000435 ORTHO05D007717 1.0e-15 87.4 106 52.8
CSS0010156 Camellia sinensis var. sinensis HOM05D000435 ORTHO05D007717 1.3e-15 87.0 116 46.6
Lj5g0001637 Lotus japonicus HOM05D000435 ORTHO05D007717 1.7e-15 86.7 102 52.9
Oeu044341.1 Olea europaea HOM05D000435 ORTHO05D007717 5.0e-15 85.1 104 51.9
QL01p002136 Quercus lobata HOM05D000435 ORTHO05D007717 5.0e-15 85.1 77 58.4
Gohir.D01G099900 Gossypium hirsutum HOM05D000435 ORTHO05D007717 6.5e-15 84.7 141 43.3
COL.COLO4_20458 Corchorus olitorius HOM05D000435 ORTHO05D007717 1.4e-14 83.6 102 52.9
Haze_11029 Corylus avellana HOM05D000435 ORTHO05D007717 1.4e-14 83.6 79 55.7
Gorai.002G180700 Gossypium raimondii HOM05D000435 ORTHO05D007717 1.4e-14 83.6 141 42.6
Thecc.02G278900 Theobroma cacao HOM05D000435 ORTHO05D007717 1.4e-14 83.6 106 48.1
Glyma.20G125550 Glycine max HOM05D000435 ORTHO05D007717 2.5e-14 82.8 106 50.9
Phvul.007G036800 Phaseolus vulgaris HOM05D000435 ORTHO05D007717 2.5e-14 82.8 109 52.3
Eucgr.B02893 Eucalyptus grandis HOM05D000435 ORTHO05D007717 3.2e-14 82.4 103 50.5
Dinv05148 Davidia involucrata HOM05D000435 ORTHO05D007717 4.2e-14 82.0 64 62.5
Gohir.A01G153500 Gossypium hirsutum HOM05D000435 ORTHO05D007717 7.2e-14 81.3 141 41.8
vmacro00423 Vaccinium macrocarpon HOM05D000435 ORTHO05D007717 7.2e-14 81.3 58 70.7
Actinidia33409 Actinidia chinensis HOM05D000435 ORTHO05D007717 9.3e-14 80.9 59 64.4
Lj6A748T52 Lonicera japonica HOM05D000435 ORTHO05D007717 9.3e-14 80.9 131 38.9
arahy.Tifrunner.gnm1.ann1.X7UDDV Arachis hypogaea HOM05D000435 ORTHO05D007717 1.2e-13 80.5 116 44.8
Medtr1g108340 Medicago truncatula HOM05D000435 ORTHO05D007717 1.2e-13 80.5 100 49.0
FAN17G2296 Fragaria x ananassa HOM05D000435 ORTHO05D007717 1.6e-13 80.1 106 48.1
Cpa.g.sc65.118 Carica papaya HOM05D000435 ORTHO05D007717 2.1e-13 79.7 62 61.3
TAR371G0344 Trochodendron aralioides HOM05D000435 ORTHO05D007717 2.1e-13 79.7 56 66.1
ClCG05G022200 Citrullus lanatus HOM05D000435 ORTHO05D007717 2.7e-13 79.3 61 59.0
arahy.Tifrunner.gnm1.ann1.XA63TZ Arachis hypogaea HOM05D000435 ORTHO05D007717 3.6e-13 79.0 116 44.0
Lalb_Chr02g0145491 Lupinus albus HOM05D000435 ORTHO05D007717 3.6e-13 79.0 108 48.1
TPR.G4902 Trifolium pratense HOM05D000435 ORTHO05D007717 3.6e-13 79.0 117 44.4
Dinv13004 Davidia involucrata HOM05D000435 ORTHO05D007717 4.6e-13 78.6 74 56.8
Duzib268G1320 Durio zibethinus HOM05D000435 ORTHO05D007717 4.6e-13 78.6 140 40.0
FAN22G2141 Fragaria x ananassa HOM05D000435 ORTHO05D007717 4.6e-13 78.6 103 47.6
DCAR_007282 Daucus carota HOM05D000435 ORTHO05D007717 6.1e-13 78.2 88 50.0
Lj5g0022478 Lotus japonicus HOM05D000435 ORTHO05D007717 6.1e-13 78.2 65 60.0
Manes.06G061400 Manihot esculenta HOM05D000435 ORTHO05D007717 6.1e-13 78.2 73 52.1
Ciclev10014411m.g Citrus clementina HOM05D000435 ORTHO05D007717 7.9e-13 77.8 103 49.5
FAN07G1046 Fragaria x ananassa HOM05D000435 ORTHO05D007717 7.9e-13 77.8 103 45.6
Rhsim09G0067900 Rhododendron simsii HOM05D000435 ORTHO05D007717 7.9e-13 77.8 113 46.9
Cc11_g08910 Coffea canephora HOM05D000435 ORTHO05D007717 1.0e-12 77.4 65 58.5
FvH4_4g32200 Fragaria vesca HOM05D000435 ORTHO05D007717 1.4e-12 77.0 106 47.2
FAN12G3992 Fragaria x ananassa HOM05D000435 ORTHO05D007717 1.4e-12 77.0 106 47.2
Ca_11094_v3 Cicer arietinum L. HOM05D000435 ORTHO05D007717 1.8e-12 76.6 100 47.0
TAR622G0717 Trochodendron aralioides HOM05D000435 ORTHO05D007717 2.3e-12 76.3 85 51.8
AT2G01320 Arabidopsis thaliana HOM05D000435 ORTHO05D007717 3.9e-12 75.5 121 43.0
CANSAT01G1487 Cannabis sativa HOM05D000435 ORTHO05D007717 3.9e-12 75.5 65 60.0
Atru.chr11.413 Acer truncatum HOM05D000435 ORTHO05D007717 6.7e-12 74.7 104 50.0
Migut.E00410 Erythranthe guttata HOM05D000435 ORTHO05D007717 6.7e-12 74.7 107 45.8
Peaxi162Scf00205g00039 Petunia axillaris HOM05D000435 ORTHO05D007717 8.8e-12 74.3 78 52.6
MSTRG.13574 Avicennia marina HOM05D000435 ORTHO05D007717 1.5e-11 73.6 126 38.1
ECA234G2068 Erigeron canadensis HOM05D000435 ORTHO05D007717 1.9e-11 73.2 83 47.0
CARHR143840 Cardamine hirsuta HOM05D000435 ORTHO05D007717 2.5e-11 72.8 116 42.2
HanXRQChr12g0377691 Helianthus annuus HOM05D000435 ORTHO05D007717 2.5e-11 72.8 91 45.1
Nn4g24088 Nelumbo nucifera HOM05D000435 ORTHO05D007717 2.5e-11 72.8 50 66.0
Potri.010G115000 Populus trichocarpa HOM05D000435 ORTHO05D007717 2.5e-11 72.8 54 68.5
Sabra10G0085100 Salix brachista HOM05D000435 ORTHO05D007717 2.5e-11 72.8 55 65.5
A02p31890 Brassica napus HOM05D000435 ORTHO05D007717 3.3e-11 72.4 138 39.9
BraA02t08199Z Brassica rapa HOM05D000435 ORTHO05D007717 3.3e-11 72.4 138 39.9
Sp2g12770 Schrenkiella parvula HOM05D000435 ORTHO05D007717 3.3e-11 72.4 115 43.5
Hund24996 Selenicereus undatus HOM05D000435 ORTHO05D007717 3.3e-11 72.4 107 42.1
GSVIVG01011781001 Vitis vinifera HOM05D000435 ORTHO05D007717 3.3e-11 72.4 54 63.0
MBI10_g07292_MAGBIO Magnolia biondii HOM05D000435 ORTHO05D007717 4.3e-11 72.0 51 68.6
BcaB07g30406 Brassica carinata HOM05D000435 ORTHO05D007717 7.4e-11 71.2 140 38.6
Carub.0005s0029 Capsella rubella HOM05D000435 ORTHO05D007717 9.7e-11 70.9 124 37.9
Hma1.2p1_2806F.1_g328830 Hydrangea macrophylla HOM05D000435 ORTHO05D007717 9.7e-11 70.9 45 73.3
TWI79G1754 Tripterygium wilfordii HOM05D000435 ORTHO05D007717 1.3e-10 70.5 65 53.8
AL5G10280 Arabidopsis lyrata HOM05D000435 ORTHO05D007717 1.7e-10 70.1 113 40.7
PGSC0003DMG400030507 Solanum tuberosum HOM05D000435 ORTHO05D007717 1.7e-10 70.1 117 42.7
Ah.03g138550 Amaranthus hybridus HOM05D000435 ORTHO05D007717 2.2e-10 69.7 99 40.4
Sc11g0004030 Simmondsia chinensis HOM05D000435 ORTHO05D007717 2.2e-10 69.7 100 47.0
CsaV3_5G034920 Cucumis sativus L. HOM05D000435 ORTHO05D007717 3.7e-10 68.9 45 68.9
AUR62039560 Chenopodium quinoa HOM05D000435 ORTHO05D007717 4.8e-10 68.6 99 41.4
Aqoxy3G03969 Aquilegia oxysepala HOM05D000435 ORTHO05D007717 6.3e-10 68.2 48 62.5
BcaC03g17022 Brassica carinata HOM05D000435 ORTHO05D007717 6.3e-10 68.2 141 39.0
Thhalv10000791m.g Eutrema salsugineum HOM05D000435 ORTHO05D007717 6.3e-10 68.2 119 37.0
Sopen05g004180 Solanum pennellii HOM05D000435 ORTHO05D007717 6.3e-10 68.2 89 41.6
THA.LOC104823881 Tarenaya hassleriana HOM05D000435 ORTHO05D007717 6.3e-10 68.2 99 45.5
Lsat_1_v5_gn_4_15380 Lactuca sativa HOM05D000435 ORTHO05D007717 1.1e-09 67.4 96 44.8
AUR62014133 Chenopodium quinoa HOM05D000435 ORTHO05D007717 1.4e-09 67.0 99 40.4
Nitab4.5_0007384g0020 Nicotiana tabacum HOM05D000435 ORTHO05D007717 1.4e-09 67.0 110 40.0
C02p49340 Brassica napus HOM05D000435 ORTHO05D007717 1.8e-09 66.6 121 38.0
BolC2t11021H Brassica oleracea HOM05D000435 ORTHO05D007717 1.8e-09 66.6 138 38.4
Sed0013515 Sechium edule HOM05D000435 ORTHO05D007717 1.8e-09 66.6 122 41.0
Solyc05g008350.3 Solanum lycopersicum HOM05D000435 ORTHO05D007717 1.8e-09 66.6 89 41.6
CAN.G1693.15 Capsicum annuum HOM05D000435 ORTHO05D007717 2.4e-09 66.2 102 39.2
PGR102G2223 Punica granatum HOM05D000435 ORTHO05D007717 2.4e-09 66.2 108 39.8
CDE06G1254 Ceratophyllum demersum HOM05D000435 ORTHO05D007717 9.1e-09 64.3 54 57.4
MELO3C012302.2 Cucumis melo HOM05D000435 ORTHO05D007717 1.2e-08 63.9 63 55.6
Nitab4.5_0006134g0030 Nicotiana tabacum HOM05D000435 ORTHO05D007717 2.0e-08 63.2 94 42.6
EL10Ac6g14248 Beta vulgaris HOM05D000386 ORTHO05D007717 2.6e-08 62.8 74 45.9
unitig_62.g23730 Utricularia gibba HOM05D000435 ORTHO05D007717 2.6e-08 62.8 75 49.3
Aa31LG2G8600 Aethionema arabicum HOM05D000435 ORTHO05D007717 7.7e-08 61.2 107 36.4
PSO782G5050 Papaver somniferum HOM05D000435 ORTHO05D007717 7.7e-08 61.2 68 48.5
ATR0326G016 Amborella trichopoda HOM05D000435 ORTHO05D007717 2.9e-07 59.3 56 55.4
HPP92_004829 Vanilla planifolia HOM05D000435 ORTHO05D007717 1.4e-06 57.0 55 49.1
Zm00001eb334910 Zea mays HOM05D000435 ORTHO05D007717 1.4e-06 57.0 56 53.6


User provided reference genes

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