Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD16G1030000 Malus domestica HOM05D002727 ORTHO05D002856 6.7e-57 223.8 112 100.0
MD13G1026900 Malus domestica HOM05D002727 ORTHO05D002856 1.3e-44 183.0 117 82.1
FAN27G2751 Fragaria x ananassa HOM05D002727 ORTHO05D002856 5.1e-33 144.4 109 64.2
FvH4_2g32760 Fragaria vesca HOM05D002727 ORTHO05D002856 1.1e-32 143.3 109 64.2
FAN24G3357 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.1e-32 143.3 109 64.2
FAN15G1981 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.5e-32 142.9 109 63.3
FAN20G2548 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.6e-32 142.1 109 63.3
FAN05G5380 Fragaria x ananassa HOM05D002727 ORTHO05D002856 4.1e-30 134.8 106 64.2
FAN03G1798 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.5e-29 132.9 107 64.5
FvH4_7g12190 Fragaria vesca HOM05D002727 ORTHO05D002856 2.6e-29 132.1 106 62.3
FAN06G2836 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.6e-29 132.1 106 62.3
FAN05G5197 Fragaria x ananassa HOM05D002727 ORTHO05D002856 3.4e-29 131.7 106 63.2
FAN14G2593 Fragaria x ananassa HOM05D002727 ORTHO05D002856 3.4e-29 131.7 106 63.2
FAN10G0099 Fragaria x ananassa HOM05D000147 ORTHO05D007841 5.9e-29 131.0 106 61.3
FAN02G0051 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.7e-28 129.4 106 62.3
FAN09G3462 Fragaria x ananassa HOM05D002727 ORTHO05D002856 5.5e-27 124.4 106 61.3
CiPaw.06G012900 Carya illinoinensis HOM05D002727 ORTHO05D002856 1.5e-24 116.3 107 57.9
FAN06G1687 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.0e-24 115.9 93 62.4
QL01p002288 Quercus lobata HOM05D002727 ORTHO05D002856 1.3e-23 113.2 105 62.9
QL01p002083 Quercus lobata HOM05D002727 ORTHO05D002856 2.2e-23 112.5 108 57.4
ClCG01G006130 Citrullus lanatus HOM05D002727 ORTHO05D002856 7.0e-22 107.5 104 56.7
FAN10G2401 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.6e-21 105.5 87 59.8
Cfa008577 Carpinus fangiana HOM05D002727 ORTHO05D002856 3.5e-21 105.1 107 53.3
Sed0024961 Sechium edule HOM05D002727 ORTHO05D002856 3.5e-21 105.1 106 50.9
TAR622G1289 Trochodendron aralioides HOM05D002727 ORTHO05D002856 5.9e-21 104.4 105 57.1
Dinv16190 Davidia involucrata HOM05D002727 ORTHO05D002856 1.7e-20 102.8 106 50.9
Ca_24568_v3 Cicer arietinum L. HOM05D002727 ORTHO05D002856 2.2e-20 102.4 106 45.3
Haze_11036 Corylus avellana HOM05D002727 ORTHO05D002856 2.2e-20 102.4 107 52.3
Sabra08G0096300 Salix brachista HOM05D002727 ORTHO05D002856 2.2e-20 102.4 108 50.0
MELO3C005314.2 Cucumis melo HOM05D002727 ORTHO05D002856 8.5e-20 100.5 104 51.9
Manes.14G135600 Manihot esculenta HOM05D002727 ORTHO05D002856 1.1e-19 100.1 106 52.8
Ciclev10017676m.g Citrus clementina HOM05D002727 ORTHO05D002856 1.5e-19 99.8 111 51.4
DCAR_007283 Daucus carota HOM05D002727 ORTHO05D002856 1.5e-19 99.8 105 47.6
CSS0022209 Camellia sinensis var. sinensis HOM05D002727 ORTHO05D002856 1.9e-19 99.4 105 50.5
CsaV3_5G028530 Cucumis sativus L. HOM05D002727 ORTHO05D002856 2.5e-19 99.0 104 51.0
DCAR_023615 Daucus carota HOM05D002727 ORTHO05D002856 4.2e-19 98.2 106 46.2
Potri.008G128200 Populus trichocarpa HOM05D002727 ORTHO05D002856 7.2e-19 97.4 106 51.9
Actinidia36683 Actinidia chinensis HOM05D002727 ORTHO05D002856 1.2e-18 96.7 105 52.4
FAN01G0002 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.2e-18 96.7 107 55.1
Actinidia15249 Actinidia chinensis HOM05D002727 ORTHO05D002856 2.1e-18 95.9 105 51.4
Medtr1g108470 Medicago truncatula HOM05D002727 ORTHO05D002856 2.1e-18 95.9 100 52.0
Prupe.1G322000 Prunus persica HOM05D002727 ORTHO05D002856 2.7e-18 95.5 103 55.3
TPR.G24442 Trifolium pratense HOM05D002727 ORTHO05D002856 2.7e-18 95.5 106 42.5
Dinv05150 Davidia involucrata HOM05D002727 ORTHO05D002856 4.7e-18 94.7 100 53.0
Nn3g16463 Nelumbo nucifera HOM05D002727 ORTHO05D002856 4.7e-18 94.7 104 51.9
VMungo0720G2475 Vigna mungo HOM05D002727 ORTHO05D002856 4.7e-18 94.7 100 52.0
CDE04G0093 Ceratophyllum demersum HOM05D002727 ORTHO05D002856 6.1e-18 94.4 105 47.6
Glyma.20G124900 Glycine max HOM05D002727 ORTHO05D002856 6.1e-18 94.4 100 52.0
Duzib251G0433 Durio zibethinus HOM05D002727 ORTHO05D002856 8.0e-18 94.0 110 49.1
Medtr5g044170 Medicago truncatula HOM05D002727 ORTHO05D002856 8.0e-18 94.0 105 43.8
Glyma.10G265700 Glycine max HOM05D002727 ORTHO05D002856 1.0e-17 93.6 100 52.0
Atru.chr11.374 Acer truncatum HOM05D002727 ORTHO05D002856 1.4e-17 93.2 111 45.9
Hma1.2p1_0114F.1_g055280 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 1.8e-17 92.8 109 45.9
Sabra08G0096800 Salix brachista HOM05D002727 ORTHO05D002856 4.0e-17 91.7 106 49.1
COL.COLO4_20450 Corchorus olitorius HOM05D002727 ORTHO05D002856 5.2e-17 91.3 96 51.0
Lalb_Chr17g0338701 Lupinus albus HOM05D002727 ORTHO05D002856 5.2e-17 91.3 105 44.8
Lj5g0017764 Lotus japonicus HOM05D002727 ORTHO05D002856 8.8e-17 90.5 100 50.0
Ca_11101_v3 Cicer arietinum L. HOM05D002727 ORTHO05D002856 1.2e-16 90.1 100 49.0
Ciclev10017720m.g Citrus clementina HOM05D002727 ORTHO05D002856 2.0e-16 89.4 110 48.2
Lsat_1_v5_gn_8_43200 Lactuca sativa HOM05D002727 ORTHO05D002856 2.0e-16 89.4 105 46.7
Psat2g129760 Pisum sativum HOM05D002727 ORTHO05D002856 2.0e-16 89.4 105 42.9
MD13G1028200 Malus domestica HOM05D002727 ORTHO05D002856 2.6e-16 89.0 105 50.5
Manes.17G075200 Manihot esculenta HOM05D002727 ORTHO05D002856 3.3e-16 88.6 107 46.7
Ah.02g128090 Amaranthus hybridus HOM05D002727 ORTHO05D002856 4.4e-16 88.2 99 46.5
FvH4_6g53540 Fragaria vesca HOM05D002727 ORTHO05D002856 4.4e-16 88.2 105 47.6
Thecc.02G278300 Theobroma cacao HOM05D002727 ORTHO05D002856 4.4e-16 88.2 111 47.7
HanXRQChr08g0212641 Helianthus annuus HOM05D002727 ORTHO05D002856 5.7e-16 87.8 105 44.8
Phvul.007G037300 Phaseolus vulgaris HOM05D002727 ORTHO05D002856 5.7e-16 87.8 100 48.0
QL02p071341 Quercus lobata HOM05D002727 ORTHO05D002856 5.7e-16 87.8 104 48.1
VMungo0720G0381 Vigna mungo HOM05D002727 ORTHO05D002856 5.7e-16 87.8 100 50.0
Lalb_Chr21g0308511 Lupinus albus HOM05D002727 ORTHO05D002856 7.5e-16 87.4 100 50.0
Prupe.3G306500 Prunus persica HOM05D002727 ORTHO05D002856 7.5e-16 87.4 104 48.1
CANSAT01G3036 Cannabis sativa HOM05D002727 ORTHO05D002856 9.7e-16 87.0 106 48.1
ECA232G4731 Erigeron canadensis HOM05D002727 ORTHO05D002856 1.3e-15 86.7 108 42.6
Psat6g221920 Pisum sativum HOM05D002727 ORTHO05D002856 1.3e-15 86.7 100 49.0
FAN05G4306 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.7e-15 86.3 105 46.7
Oeu044348.1 Olea europaea HOM05D002727 ORTHO05D002856 2.2e-15 85.9 110 42.7
Aqoxy2G00907 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 3.7e-15 85.1 95 51.6
arahy.Tifrunner.gnm1.ann1.AV0RHQ Arachis hypogaea HOM05D002727 ORTHO05D002856 3.7e-15 85.1 122 40.2
arahy.Tifrunner.gnm1.ann1.E5JI7C Arachis hypogaea HOM05D002727 ORTHO05D002856 3.7e-15 85.1 100 48.0
arahy.Tifrunner.gnm1.ann1.NZR7KS Arachis hypogaea HOM05D002727 ORTHO05D002856 3.7e-15 85.1 100 48.0
Hma1.2p1_0951F.1_g240760 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 3.7e-15 85.1 105 51.4
Hma1.2p1_2764F.1_g328145 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 3.7e-15 85.1 105 51.4
Atru.chr6.2573 Acer truncatum HOM05D002727 ORTHO05D002856 6.3e-15 84.3 101 48.5
ECA233G4969 Erigeron canadensis HOM05D002727 ORTHO05D002856 8.2e-15 84.0 116 41.4
Potri.008G127500 Populus trichocarpa HOM05D002727 ORTHO05D002856 1.1e-14 83.6 100 47.0
FAN14G5438 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.4e-14 83.2 105 45.7
RcHm_v2.0_Chr2g0175581 Rosa chinensis HOM05D002727 ORTHO05D002856 1.4e-14 83.2 110 47.3
arahy.Tifrunner.gnm1.ann1.PT8N4B Arachis hypogaea HOM05D002727 ORTHO05D002856 1.8e-14 82.8 122 38.5
Rhsim09G0100100 Rhododendron simsii HOM05D008460 ORTHO05D001602 1.8e-14 82.8 103 47.6
TWI79G1492 Tripterygium wilfordii HOM05D002727 ORTHO05D002856 1.8e-14 82.8 112 47.3
FAN07G1475 Fragaria x ananassa HOM05D005453 ORTHO05D006520 2.4e-14 82.4 101 49.5
PGR119G0434 Punica granatum HOM05D002727 ORTHO05D002856 2.4e-14 82.4 106 46.2
RcHm_v2.0_Chr4g0440841 Rosa chinensis HOM05D002727 ORTHO05D002856 2.4e-14 82.4 100 50.0
HanXRQChr15g0488631 Helianthus annuus HOM05D002727 ORTHO05D002856 3.1e-14 82.0 107 39.3
MD16G1031100 Malus domestica HOM05D002727 ORTHO05D002856 3.1e-14 82.0 105 48.6
Lsat_1_v5_gn_3_54560 Lactuca sativa HOM05D002727 ORTHO05D002856 5.3e-14 81.3 105 43.8
Manes.17G103100 Manihot esculenta HOM05D002727 ORTHO05D002856 5.3e-14 81.3 101 46.5
Eucgr.G02210 Eucalyptus grandis HOM05D002727 ORTHO05D002856 1.2e-13 80.1 109 43.1
FAN07G1376 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.2e-13 80.1 101 50.5
MELO3C012299.2 Cucumis melo HOM05D002727 ORTHO05D002856 1.6e-13 79.7 100 43.0
Aqoxy1G00996 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 2.0e-13 79.3 94 47.9
MD09G1010600 Malus domestica HOM05D002727 ORTHO05D002856 2.0e-13 79.3 104 44.2
Cpa.g.sc65.111 Carica papaya HOM05D002727 ORTHO05D002856 2.7e-13 79.0 111 39.6
FvH4_4g32150 Fragaria vesca HOM05D002727 ORTHO05D002856 2.7e-13 79.0 101 49.5
FAN12G1004 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.7e-13 79.0 101 49.5
FAN22G0940 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.7e-13 79.0 101 49.5
Lj2g0009169 Lotus japonicus HOM05D002727 ORTHO05D002856 2.7e-13 79.0 106 44.3
PGR102G0802 Punica granatum HOM05D002727 ORTHO05D002856 2.7e-13 79.0 106 44.3
Solyc05g008320.1 Solanum lycopersicum HOM05D002727 ORTHO05D002856 2.7e-13 79.0 103 41.7
Sopen05g004150 Solanum pennellii HOM05D002727 ORTHO05D002856 2.7e-13 79.0 103 41.7
Migut.E00413 Erythranthe guttata HOM05D002727 ORTHO05D002856 4.5e-13 78.2 105 41.0
Sabra17G0092700 Salix brachista HOM05D002727 ORTHO05D002856 5.9e-13 77.8 108 45.4
CsaV3_5G034890 Cucumis sativus L. HOM05D002727 ORTHO05D002856 1.0e-12 77.0 100 43.0
vmacro10627 Vaccinium macrocarpon HOM05D002727 ORTHO05D002856 1.0e-12 77.0 111 43.2
CAN.G185.21 Capsicum annuum HOM05D002727 ORTHO05D002856 1.3e-12 76.6 103 40.8
ClCG05G022230 Citrullus lanatus HOM05D002727 ORTHO05D002856 1.3e-12 76.6 100 42.0
Cpa.g.sc171.13 Carica papaya HOM05D002727 ORTHO05D002856 1.7e-12 76.3 106 43.4
Potri.017G111600 Populus trichocarpa HOM05D002727 ORTHO05D002856 1.7e-12 76.3 104 47.1
PGSC0003DMG400030506 Solanum tuberosum HOM05D002727 ORTHO05D002856 1.7e-12 76.3 103 39.8
Actinidia26664 Actinidia chinensis HOM05D002727 ORTHO05D002856 2.9e-12 75.5 73 53.4
Sed0008746 Sechium edule HOM05D002727 ORTHO05D002856 2.9e-12 75.5 101 44.6
SGA_v2.0_scaffold170G38831 Striga asiatica HOM05D002727 ORTHO05D002856 2.9e-12 75.5 97 40.2
TWI56G0192 Tripterygium wilfordii HOM05D002727 ORTHO05D002856 3.8e-12 75.1 109 41.3
Aa31LG1G13580 Aethionema arabicum HOM05D002727 ORTHO05D002856 8.5e-12 73.9 105 41.9
AUR62014130 Chenopodium quinoa HOM05D002727 ORTHO05D002856 8.5e-12 73.9 96 46.9
AUR62039553 Chenopodium quinoa HOM05D002727 ORTHO05D002856 8.5e-12 73.9 96 45.8
Peaxi162Scf00205g00023 Petunia axillaris HOM05D002727 ORTHO05D002856 8.5e-12 73.9 107 39.3
EL10Ac6g14255 Beta vulgaris HOM05D002727 ORTHO05D002856 1.1e-11 73.6 93 46.2
Nitab4.5_0006134g0020 Nicotiana tabacum HOM05D002727 ORTHO05D002856 1.5e-11 73.2 108 40.7
Eucgr.G02206 Eucalyptus grandis HOM05D002727 ORTHO05D002856 2.5e-11 72.4 109 46.8
FAN07G0027 Fragaria x ananassa HOM05D002727 ORTHO05D002856 3.2e-11 72.0 101 46.5
Thhalv10028170m.g Eutrema salsugineum HOM05D002727 ORTHO05D002856 5.5e-11 71.2 105 40.0
arahy.Tifrunner.gnm1.ann1.A4HJXM Arachis hypogaea HOM05D002727 ORTHO05D002856 7.2e-11 70.9 88 44.3
arahy.Tifrunner.gnm1.ann1.L56H08 Arachis hypogaea HOM05D002727 ORTHO05D002856 7.2e-11 70.9 88 44.3
TPR.G4843 Trifolium pratense HOM05D002727 ORTHO05D002856 7.2e-11 70.9 77 45.5
THA.LOC104824571 Tarenaya hassleriana HOM05D002727 ORTHO05D002856 1.2e-10 70.1 105 41.0
AT5G40940 Arabidopsis thaliana HOM05D002727 ORTHO05D002856 1.6e-10 69.7 105 40.0
THA.LOC104824147 Tarenaya hassleriana HOM05D002727 ORTHO05D002856 1.6e-10 69.7 102 39.2
Lalb_Chr24g0403301 Lupinus albus HOM05D002727 ORTHO05D002856 2.7e-10 68.9 100 40.0
PSO478G0105 Papaver somniferum HOM05D002727 ORTHO05D002856 2.7e-10 68.9 108 43.5
FAN07G2473 Fragaria x ananassa HOM05D002727 ORTHO05D002856 3.6e-10 68.6 93 46.2
Atru.chr11.407 Acer truncatum HOM05D002727 ORTHO05D002856 4.7e-10 68.2 95 45.3
Carub.0007s3456 Capsella rubella HOM05D002727 ORTHO05D002856 6.1e-10 67.8 105 39.0
PSO017G4651 Papaver somniferum HOM05D002727 ORTHO05D002856 6.1e-10 67.8 108 42.6
Glyma.09G119800 Glycine max HOM05D002727 ORTHO05D002856 8.0e-10 67.4 106 40.6
Sc18g0004340 Simmondsia chinensis HOM05D002727 ORTHO05D002856 1.4e-09 66.6 101 41.6
Thecc.02G279300 Theobroma cacao HOM05D002727 ORTHO05D002856 5.2e-09 64.7 105 39.0
Cpa.g.sc65.122 Carica papaya HOM05D002727 ORTHO05D002856 1.5e-08 63.2 109 39.4
AL7G48630 Arabidopsis lyrata HOM05D002727 ORTHO05D002856 2.0e-08 62.8 105 37.1
CANSAT64G1895 Cannabis sativa HOM05D002727 ORTHO05D002856 7.5e-08 60.8 106 39.6
FvH4_6g20740 Fragaria vesca HOM05D002727 ORTHO05D002856 1.1e-06 57.0 56 55.4
PSO017G6820 Papaver somniferum HOM05D002727 ORTHO05D002856 1.1e-06 57.0 106 39.6
PSO478G1097 Papaver somniferum HOM05D002727 ORTHO05D002856 1.1e-06 57.0 106 39.6
FAN06G1995 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.8e-06 56.2 39 69.2
PSO017G3536 Papaver somniferum HOM05D002727 ORTHO05D002856 1.8e-06 56.2 106 39.6
SGA_v2.0_scaffold668G53415 Striga asiatica HOM05D002727 ORTHO05D002856 2.4e-06 55.8 75 34.7
PSO478G1911 Papaver somniferum HOM05D002727 ORTHO05D002856 5.4e-06 54.7 107 38.3


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