Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 6.5e-38 160.2 80 100.0
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 5.1e-35 150.6 78 96.2
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 1.0e-30 136.3 78 87.2
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 1.0e-30 136.3 78 87.2
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 1.3e-30 136.0 78 87.2
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 1.7e-30 135.6 78 88.5
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.9e-30 134.8 78 85.9
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 5.0e-30 134.0 78 83.3
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 1.1e-29 132.9 78 84.6
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 1.1e-29 132.9 78 83.3
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.1e-29 132.9 78 83.3
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 1.4e-29 132.5 78 83.3
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 1.9e-29 132.1 78 83.3
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 3.2e-29 131.3 78 82.1
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.2e-29 131.3 78 82.1
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.2e-29 131.3 78 82.1
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 4.2e-29 131.0 78 82.1
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.2e-29 131.0 78 82.1
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.2e-29 131.0 78 82.1
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 7.2e-29 130.2 78 80.8
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 9.4e-29 129.8 78 80.8
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 1.6e-28 129.0 78 80.8
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.6e-28 129.0 78 80.8
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.6e-28 129.0 78 80.8
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 3.6e-28 127.9 78 79.5
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.1e-28 127.1 78 80.8
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 6.1e-28 127.1 78 80.8
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 2.3e-27 125.2 77 77.9
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 3.0e-27 124.8 78 76.9
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 3.9e-27 124.4 78 76.9
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.1e-27 124.0 78 74.4
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 5.1e-27 124.0 78 78.2
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 8.8e-27 123.2 78 74.4
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 8.8e-27 123.2 78 78.2
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.1e-26 122.9 78 73.1
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.1e-26 122.9 78 73.1
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 1.5e-26 122.5 77 76.6
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 1.5e-26 122.5 77 75.3
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 1.5e-26 122.5 78 78.2
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.0e-26 122.1 78 75.6
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.0e-26 122.1 78 75.6
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 2.5e-26 121.7 78 74.4
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 2.5e-26 121.7 78 73.1
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 2.5e-26 121.7 77 75.3
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 3.3e-26 121.3 78 76.9
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 3.3e-26 121.3 78 78.2
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 3.3e-26 121.3 78 73.1
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 4.3e-26 120.9 78 73.1
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.3e-26 120.9 78 73.1
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 4.3e-26 120.9 78 71.8
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 4.3e-26 120.9 78 74.4
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 4.3e-26 120.9 78 76.9
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 4.3e-26 120.9 78 74.4
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 5.7e-26 120.6 78 74.4
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 7.4e-26 120.2 78 71.8
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 9.7e-26 119.8 78 71.8
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 1.3e-25 119.4 78 71.8
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 1.3e-25 119.4 78 75.6
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 1.3e-25 119.4 78 71.8
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 1.7e-25 119.0 78 73.1
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 1.7e-25 119.0 78 71.8
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 1.7e-25 119.0 78 73.1
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 1.7e-25 119.0 78 73.1
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 1.7e-25 119.0 77 76.6
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.8e-25 118.2 95 66.3
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 2.8e-25 118.2 78 73.1
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 3.7e-25 117.9 78 75.6
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 4.8e-25 117.5 78 71.8
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 4.8e-25 117.5 78 70.5
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 4.8e-25 117.5 78 74.4
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 4.8e-25 117.5 78 70.5
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 8.2e-25 116.7 77 72.7
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 1.1e-24 116.3 78 69.2
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 1.4e-24 115.9 77 72.7
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 1.4e-24 115.9 78 74.4
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 3.1e-24 114.8 80 71.2
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 4.1e-24 114.4 78 66.7
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 5.3e-24 114.0 78 71.8
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 5.3e-24 114.0 78 69.2
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 5.3e-24 114.0 78 70.5
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 6.9e-24 113.6 78 71.8
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 9.1e-24 113.2 77 67.5
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 9.1e-24 113.2 77 70.1
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 1.2e-23 112.8 78 65.4
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 2.0e-23 112.1 78 70.5
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 2.0e-23 112.1 78 73.1
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 2.0e-23 112.1 78 69.2
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 2.0e-23 112.1 78 67.9
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 2.6e-23 111.7 76 72.4
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 7.7e-23 110.2 77 68.8
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 1.0e-22 109.8 78 66.7
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 1.0e-22 109.8 78 67.9
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 2.9e-22 108.2 78 69.2
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 8.5e-22 106.7 78 66.7
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 8.5e-22 106.7 78 65.4
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.1e-21 106.3 78 65.4
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 1.4e-21 105.9 78 67.9
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 1.4e-21 105.9 77 63.6
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 2.5e-21 105.1 78 65.4
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 4.2e-21 104.4 78 65.4
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 5.5e-21 104.0 77 63.6
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.1e-20 102.1 78 57.7
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 3.6e-20 101.3 66 72.7
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 6.3e-17 90.5 73 57.5
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 8.2e-17 90.1 63 71.4
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 5.3e-16 87.4 68 64.7
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 7.0e-16 87.0 77 54.5
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 3.8e-14 81.3 78 47.4
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 4.7e-12 74.3 52 63.5
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 8.0e-12 73.6 76 51.3
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 6.7e-11 70.5 45 71.1
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.1e-10 69.7 80 46.2
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 1.1e-10 69.7 57 57.9


User provided reference genes

Program Settings