Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD16G1003900 Malus domestica HOM05D004717 ORTHO05D005636 1.4e-110 402.9 198 100.0
MD13G1003500 Malus domestica HOM05D004717 ORTHO05D005636 2.0e-104 382.5 198 94.4
Prupe.1G348900 Prunus persica HOM05D004717 ORTHO05D005636 7.3e-99 364.0 198 87.4
RcHm_v2.0_Chr4g0446911 Rosa chinensis HOM05D004717 ORTHO05D005636 2.6e-96 355.5 198 85.9
FAN12G1282 Fragaria x ananassa HOM05D004717 ORTHO05D005636 4.4e-96 354.8 198 84.8
Manes.08G039100 Manihot esculenta HOM05D004717 ORTHO05D005636 1.2e-90 336.7 197 82.2
Gorai.008G146900 Gossypium raimondii HOM05D004717 ORTHO05D005636 1.1e-89 333.6 197 79.2
Duzib132G0983 Durio zibethinus HOM05D004717 ORTHO05D005636 1.8e-89 332.8 197 79.2
Gohir.A12G132100 Gossypium hirsutum HOM05D004717 ORTHO05D005636 4.0e-89 331.6 198 78.3
CiPaw.06G062200 Carya illinoinensis HOM05D004717 ORTHO05D005636 1.5e-88 329.7 198 78.3
QL04p036080 Quercus lobata HOM05D004717 ORTHO05D005636 2.6e-88 328.9 196 79.1
Rhsim02G0075200 Rhododendron simsii HOM05D004717 ORTHO05D005636 2.6e-88 328.9 198 73.7
Thecc.02G155400 Theobroma cacao HOM05D004717 ORTHO05D005636 4.4e-88 328.2 197 78.2
Lj2g0014996 Lotus japonicus HOM05D004717 ORTHO05D005636 5.8e-88 327.8 198 77.8
Lj5g0015714 Lotus japonicus HOM05D004717 ORTHO05D005636 9.9e-88 327.0 198 77.3
Haze_11783 Corylus avellana HOM05D004717 ORTHO05D005636 1.3e-87 326.6 197 78.2
QL04p036464 Quercus lobata HOM05D004717 ORTHO05D005636 1.3e-87 326.6 196 78.6
CiPaw.05G171400 Carya illinoinensis HOM05D004717 ORTHO05D005636 3.8e-87 325.1 198 78.3
Cc11_g03470 Coffea canephora HOM05D004717 ORTHO05D005636 1.1e-86 323.6 198 73.2
PGR142G2311 Punica granatum HOM05D004717 ORTHO05D005636 1.1e-86 323.6 198 74.7
TWI74G1267 Tripterygium wilfordii HOM05D004717 ORTHO05D005636 1.4e-86 323.2 198 73.7
Lj6P708T54 Lonicera japonica HOM05D004717 ORTHO05D005636 3.2e-86 322.0 198 74.2
Lalb_Chr24g0398391 Lupinus albus HOM05D004717 ORTHO05D005636 4.2e-86 321.6 198 77.3
THA.LOC104800704 Tarenaya hassleriana HOM05D004717 ORTHO05D005636 4.2e-86 321.6 197 73.6
Lj3g0022258 Lotus japonicus HOM05D004717 ORTHO05D005636 5.4e-86 321.2 198 77.3
vmacro15638 Vaccinium macrocarpon HOM05D004717 ORTHO05D005636 5.4e-86 321.2 197 72.1
GSVIVG01038782001 Vitis vinifera HOM05D004717 ORTHO05D005636 7.1e-86 320.9 194 78.9
Peaxi162Scf00681g00024 Petunia axillaris HOM05D004717 ORTHO05D005636 1.6e-85 319.7 197 73.1
Glyma.16G218800 Glycine max HOM05D004717 ORTHO05D005636 3.5e-85 318.5 198 76.8
PGR142G4258 Punica granatum HOM05D004717 ORTHO05D005636 6.0e-85 317.8 196 74.0
Solyc04g009010.2 Solanum lycopersicum HOM05D004717 ORTHO05D005636 6.0e-85 317.8 198 73.2
Dinv02673 Davidia involucrata HOM05D004717 ORTHO05D005636 7.8e-85 317.4 197 75.6
CAN.G274.13 Capsicum annuum HOM05D004717 ORTHO05D005636 1.0e-84 317.0 197 72.1
Potri.005G089500 Populus trichocarpa HOM05D004717 ORTHO05D005636 1.0e-84 317.0 198 76.8
GSVIVG01026135001 Vitis vinifera HOM05D004717 ORTHO05D005636 1.0e-84 317.0 198 74.2
PGSC0003DMG400011510 Solanum tuberosum HOM05D004717 ORTHO05D005636 1.3e-84 316.6 198 72.7
Atru.chr11.1095 Acer truncatum HOM05D004717 ORTHO05D005636 1.7e-84 316.2 197 76.6
Eucgr.G02601 Eucalyptus grandis HOM05D004717 ORTHO05D005636 2.3e-84 315.8 198 72.7
Oeu003437.1 Olea europaea HOM05D004717 ORTHO05D005636 3.0e-84 315.5 198 73.2
Oeu033041.1 Olea europaea HOM05D004717 ORTHO05D005636 3.9e-84 315.1 198 72.2
Sed0025396 Sechium edule HOM05D004717 ORTHO05D005636 3.9e-84 315.1 197 73.6
CSS0046676 Camellia sinensis var. sinensis HOM05D004717 ORTHO05D005636 5.1e-84 314.7 198 73.2
Hma1.2p1_0513F.1_g169470 Hydrangea macrophylla HOM05D004717 ORTHO05D005636 5.1e-84 314.7 197 75.1
CiPaw.05G171500 Carya illinoinensis HOM05D004717 ORTHO05D005636 6.6e-84 314.3 198 76.3
Nitab4.5_0004808g0010 Nicotiana tabacum HOM05D004717 ORTHO05D005636 6.6e-84 314.3 195 72.8
Sabra07G0063200 Salix brachista HOM05D004717 ORTHO05D005636 6.6e-84 314.3 197 75.1
TPR.G28016 Trifolium pratense HOM05D004717 ORTHO05D005636 6.6e-84 314.3 198 74.7
MELO3C022525.2 Cucumis melo HOM05D004717 ORTHO05D005636 8.7e-84 313.9 198 73.7
CsaV3_6G005870 Cucumis sativus L. HOM05D004717 ORTHO05D005636 1.9e-83 312.8 198 73.2
Ah.01g024100 Amaranthus hybridus HOM05D004717 ORTHO05D005636 2.5e-83 312.4 198 72.2
Eucgr.G02666 Eucalyptus grandis HOM05D004717 ORTHO05D005636 2.5e-83 312.4 198 72.2
Sed0013821 Sechium edule HOM05D004717 ORTHO05D005636 3.3e-83 312.0 198 72.2
Nitab4.5_0004979g0110 Nicotiana tabacum HOM05D004717 ORTHO05D005636 5.6e-83 311.2 197 71.6
Potri.007G074500 Populus trichocarpa HOM05D004717 ORTHO05D005636 5.6e-83 311.2 198 74.2
Gohir.D12G135700 Gossypium hirsutum HOM05D004717 ORTHO05D005636 7.3e-83 310.8 183 79.2
Psat1g123480 Pisum sativum HOM05D004717 ORTHO05D005636 9.6e-83 310.5 198 73.7
Lsat_1_v5_gn_9_25720 Lactuca sativa HOM05D004717 ORTHO05D005636 1.6e-82 309.7 198 69.7
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 2.1e-82 309.3 197 73.1
arahy.Tifrunner.gnm1.ann1.TS1LPS Arachis hypogaea HOM05D004717 ORTHO05D005636 2.1e-82 309.3 198 72.2
MSTRG.7889 Avicennia marina HOM05D004717 ORTHO05D005636 4.8e-82 308.1 198 71.7
Carub.0006s0723 Capsella rubella HOM05D004717 ORTHO05D005636 6.2e-82 307.8 198 71.2
Medtr6g075160 Medicago truncatula HOM05D004717 ORTHO05D005636 6.2e-82 307.8 198 73.2
arahy.Tifrunner.gnm1.ann1.8YZR55 Arachis hypogaea HOM05D004717 ORTHO05D005636 1.1e-81 307.0 198 71.7
Ciclev10016775m.g Citrus clementina HOM05D004717 ORTHO05D005636 1.1e-81 307.0 198 71.7
Phvul.004G144800 Phaseolus vulgaris HOM05D004717 ORTHO05D005636 2.4e-81 305.8 198 72.7
ClCG06G000120 Citrullus lanatus HOM05D004717 ORTHO05D005636 5.3e-81 304.7 189 74.1
TPR.G9035 Trifolium pratense HOM05D004717 ORTHO05D005636 6.9e-81 304.3 198 72.7
AL6G34580 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 1.2e-80 303.5 197 71.6
CANSAT11G2572 Cannabis sativa HOM05D004717 ORTHO05D005636 1.2e-80 303.5 199 75.4
SGA_v2.0_scaffold62G21625 Striga asiatica HOM05D004717 ORTHO05D005636 1.5e-80 303.1 196 69.4
AT5G08335 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 2.0e-80 302.8 198 70.2
Lj6P714T12 Lonicera japonica HOM05D004717 ORTHO05D005636 2.6e-80 302.4 183 76.0
Nn2g12497 Nelumbo nucifera HOM05D004717 ORTHO05D005636 2.6e-80 302.4 193 72.0
AT5G23320 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 3.4e-80 302.0 197 71.6
VMungo0464G0417 Vigna mungo HOM05D004717 ORTHO05D005636 4.4e-80 301.6 198 69.7
AL6G18770 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 5.8e-80 301.2 198 69.7
AUR62012906 Chenopodium quinoa HOM05D004717 ORTHO05D005636 9.9e-80 300.4 198 72.2
Thecc.05G241200 Theobroma cacao HOM05D004717 ORTHO05D005636 9.9e-80 300.4 186 74.7
HanXRQChr08g0237151 Helianthus annuus HOM05D004717 ORTHO05D005636 1.7e-79 299.7 197 68.5
Gohir.A11G227800 Gossypium hirsutum HOM05D004717 ORTHO05D005636 2.9e-79 298.9 184 72.8
AUR62001133 Chenopodium quinoa HOM05D004717 ORTHO05D005636 3.8e-79 298.5 195 73.3
unitig_8.g3169 Utricularia gibba HOM05D004717 ORTHO05D005636 4.9e-79 298.1 198 70.2
Sc08g0003750 Simmondsia chinensis HOM05D004717 ORTHO05D005636 8.4e-79 297.4 197 69.5
Thhalv10014725m.g Eutrema salsugineum HOM05D004717 ORTHO05D005636 1.4e-78 296.6 198 67.7
Gohir.D11G240300 Gossypium hirsutum HOM05D004717 ORTHO05D005636 1.9e-78 296.2 184 72.3
Gorai.007G253700 Gossypium raimondii HOM05D004717 ORTHO05D005636 1.9e-78 296.2 184 72.3
GSVIVG01038778001 Vitis vinifera HOM05D004717 ORTHO05D005636 1.9e-78 296.2 198 72.7
Aqoxy6G00094 Aquilegia oxysepala HOM05D004717 ORTHO05D005636 2.4e-78 295.8 194 68.6
Carub.0006s2109 Capsella rubella HOM05D004717 ORTHO05D005636 2.4e-78 295.8 197 69.5
CARHR204740 Cardamine hirsuta HOM05D004717 ORTHO05D005636 3.2e-78 295.4 198 68.2
ECA247G4036 Erigeron canadensis HOM05D004717 ORTHO05D005636 3.2e-78 295.4 198 67.7
EL10Ac9g21225 Beta vulgaris HOM05D004717 ORTHO05D005636 4.2e-78 295.0 198 68.7
Duzib177G0848 Durio zibethinus HOM05D004717 ORTHO05D005636 5.4e-78 294.7 186 74.2
SGA_v2.0_scaffold8G04231 Striga asiatica HOM05D004717 ORTHO05D005636 1.6e-77 293.1 198 69.7
Migut.L01402 Erythranthe guttata HOM05D004717 ORTHO05D005636 2.7e-77 292.4 198 65.2
DCAR_027608 Daucus carota HOM05D004717 ORTHO05D005636 1.3e-76 290.0 183 71.0
BcaB01g05612 Brassica carinata HOM05D004717 ORTHO05D005636 3.0e-76 288.9 198 68.2
BraA03t09724Z Brassica rapa HOM05D004717 ORTHO05D005636 3.0e-76 288.9 198 66.2
CARHR190220 Cardamine hirsuta HOM05D004717 ORTHO05D005636 3.0e-76 288.9 191 68.6
Duzib106G0072 Durio zibethinus HOM05D004717 ORTHO05D005636 3.9e-76 288.5 186 72.0
C03p04250 Brassica napus HOM05D004717 ORTHO05D005636 5.1e-76 288.1 198 65.7
BolC3t12957H Brassica oleracea HOM05D004717 ORTHO05D005636 5.1e-76 288.1 198 65.7
Ah.08g214600 Amaranthus hybridus HOM05D004717 ORTHO05D005636 6.6e-76 287.7 194 70.6
PSO782G0831 Papaver somniferum HOM05D004717 ORTHO05D005636 8.7e-76 287.3 195 69.2
A03p03770 Brassica napus HOM05D004717 ORTHO05D005636 1.5e-75 286.6 196 65.3
EL10Ac7g17906 Beta vulgaris HOM05D004717 ORTHO05D005636 1.9e-75 286.2 187 71.1
MBI14_g08135_MAGBIO Magnolia biondii HOM05D004717 ORTHO05D005636 2.5e-75 285.8 196 67.3
CDE02G0493 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 3.3e-75 285.4 198 65.2
Migut.E00157 Erythranthe guttata HOM05D004717 ORTHO05D005636 3.6e-74 282.0 195 66.7
Sc17g0002110 Simmondsia chinensis HOM05D004717 ORTHO05D005636 1.1e-73 280.4 191 68.6
SHI07248 Sapria himalayana HOM05D004717 ORTHO05D005636 6.9e-73 277.7 198 64.6
Lalb_Chr16g0386851 Lupinus albus HOM05D004717 ORTHO05D005636 2.0e-72 276.2 196 69.4
Sp6g34610 Schrenkiella parvula HOM05D004717 ORTHO05D005636 7.6e-72 274.2 178 69.1
Lj3P847T27 Lonicera japonica HOM05D004717 ORTHO05D005636 2.2e-71 272.7 183 71.6
HanXRQChr01g0011051 Helianthus annuus HOM05D004717 ORTHO05D005636 3.9e-68 261.9 198 62.1
Lsat_1_v5_gn_5_170960 Lactuca sativa HOM05D004717 ORTHO05D005636 1.9e-67 259.6 198 60.6
Cpa.g.sc59.26 Carica papaya HOM05D004717 ORTHO05D005636 7.4e-67 257.7 190 65.8
HPP92_018371 Vanilla planifolia HOM05D004717 ORTHO05D005636 3.1e-65 252.3 187 63.1
Actinidia35903 Actinidia chinensis HOM05D004717 ORTHO05D005636 5.8e-64 248.1 183 63.4
PSO170G2864 Papaver somniferum HOM05D004717 ORTHO05D005636 1.2e-61 240.4 166 68.7
Aa31LG11G2780 Aethionema arabicum HOM05D004717 ORTHO05D005636 3.5e-61 238.8 144 70.1
DCAR_023472 Daucus carota HOM05D004717 ORTHO05D005636 1.5e-59 233.4 144 73.6
CDE04G3142 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 2.5e-59 232.6 169 64.5
SMO117G0139 Selaginella moellendorffii HOM05D004717 ORTHO05D005636 2.8e-58 229.2 187 56.7
AUR62011721 Chenopodium quinoa HOM05D004717 ORTHO05D005636 3.7e-58 228.8 143 72.0
Rhsim02G0074800 Rhododendron simsii HOM05D004717 ORTHO05D005636 3.1e-57 225.7 197 55.3
HanXRQChr17g0556721 Helianthus annuus HOM05D004717 ORTHO05D005636 4.5e-56 221.9 155 65.2
Zm00001eb144100 Zea mays HOM05D004717 ORTHO05D005636 2.5e-54 216.1 156 62.2
Pp3c3_35430 Physcomitrium patens HOM05D004717 ORTHO05D005636 3.2e-54 215.7 192 52.6
ATR0580G192 Amborella trichopoda HOM05D004717 ORTHO05D005636 6.1e-53 211.5 144 63.9
Mapoly0062s0094 Marchantia polymorpha HOM05D004717 ORTHO05D005636 1.8e-49 199.9 181 49.7
Sopen04g004190 Solanum pennellii HOM05D004717 ORTHO05D005636 5.9e-48 194.9 114 73.7
TAR381G0283 Trochodendron aralioides HOM05D004717 ORTHO05D005636 2.1e-45 186.4 125 70.4
Glyma.09G169200 Glycine max HOM05D004717 ORTHO05D005636 3.9e-44 182.2 198 51.0
COL.COLO4_20086 Corchorus olitorius HOM05D004717 ORTHO05D005636 2.8e-42 176.0 98 78.6
SalBow2G2042 Salvia bowleyana HOM05D004717 ORTHO05D005636 3.7e-42 175.6 199 46.7
PRCOL_00002165 Prasinoderma coloniale HOM05D004717 ORTHO05D005636 1.2e-37 160.6 183 48.1
MCO05G386 Micromonas commoda HOM05D004717 ORTHO05D005636 1.0e-36 157.5 181 44.8
Haze_27496 Corylus avellana HOM05D004717 ORTHO05D005636 5.0e-31 138.7 185 40.0
Hund05579 Selenicereus undatus HOM05D004717 ORTHO05D005636 1.4e-25 120.6 118 51.7
SEGI_39005 Sequoiadendron giganteum HOM05D004717 ORTHO05D005636 1.8e-25 120.2 83 63.9
Cfa021666 Carpinus fangiana HOM05D004717 ORTHO05D005636 3.1e-25 119.4 186 37.6
ECA247G3377 Erigeron canadensis HOM05D004717 ORTHO05D005636 7.0e-25 118.2 85 67.1
Ca_23673_v3 Cicer arietinum L. HOM05D004717 ORTHO05D005636 3.8e-23 112.5 144 43.1
AagrBONN_evm.TU.Sc2ySwM_344.2327 Anthoceros agrestis HOM05D004717 ORTHO05D005636 1.6e-21 107.1 107 48.6
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 2.7e-21 106.3 194 37.1
AagrBONN_evm.TU.Sc2ySwM_117.4144 Anthoceros agrestis HOM05D004717 ORTHO05D005636 2.3e-20 103.2 104 49.0
Eucgr.D01405 Eucalyptus grandis HOM05D004717 ORTHO05D005636 4.4e-19 99.0 64 64.1
Os04g0602900 Oryza sativa ssp. japonica HOM05D004717 ORTHO05D005636 3.7e-18 95.9 71 57.7
RhsimUnG0160700 Rhododendron simsii HOM05D004717 ORTHO05D005636 3.5e-16 89.4 58 74.1
Actinidia11311 Actinidia chinensis HOM05D004717 ORTHO05D005636 2.8e-10 69.7 43 67.4
Dinv05788 Davidia involucrata HOM05D004717 ORTHO05D005636 1.3e-07 60.8 35 77.1
Nn2g15094 Nelumbo nucifera HOM05D004717 ORTHO05D005636 1.5e-06 57.4 39 69.2


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