Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD15G1438900 Malus domestica HOM05D004473 ORTHO05D005652 4.8e-31 137.1 66 100.0
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 2.0e-21 105.1 65 81.5
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 1.7e-20 102.1 65 76.9
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 5.0e-20 100.5 65 75.4
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 6.6e-20 100.1 65 75.4
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 1.5e-19 99.0 65 72.3
Peaxi162Scf00219g00049 Petunia axillaris HOM05D004473 ORTHO05D005652 2.1e-18 95.1 65 70.8
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 4.0e-17 90.9 67 70.1
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 5.2e-17 90.5 65 67.7
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 1.2e-16 89.4 64 71.9
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 2.0e-16 88.6 65 67.7
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 7.5e-16 86.7 67 71.6
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 1.3e-15 85.9 65 64.6
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 1.7e-15 85.5 65 66.2
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.2e-15 85.1 65 67.7
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.2e-15 85.1 65 67.7
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.2e-15 85.1 65 67.7
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.2e-15 85.1 65 67.7
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.2e-15 85.1 65 67.7
Hund29405 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.2e-15 85.1 65 67.7
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.2e-15 85.1 65 67.7
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.2e-15 85.1 65 67.7
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.2e-15 85.1 65 67.7
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.2e-15 85.1 65 67.7
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 4.9e-15 84.0 65 67.7
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 4.9e-15 84.0 65 67.7
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 8.3e-15 83.2 66 68.2
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 1.1e-14 82.8 65 64.6
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 1.4e-14 82.4 65 63.1
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 1.4e-14 82.4 65 63.1
Medtr7g117940 Medicago truncatula HOM05D004473 ORTHO05D005652 1.4e-14 82.4 65 63.1
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 1.4e-14 82.4 65 64.6
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 1.4e-14 82.4 66 66.7
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 1.4e-14 82.4 66 66.7
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 1.4e-14 82.4 66 66.7
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 1.4e-14 82.4 66 66.7
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 1.4e-14 82.4 66 66.7
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 1.4e-14 82.4 66 66.7
Nn1g08463 Nelumbo nucifera HOM05D004473 ORTHO05D005652 1.8e-14 82.0 68 60.3
Hund11181 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.8e-14 82.0 65 66.2
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 3.1e-14 81.3 65 66.2
Hund10683 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.6e-13 79.0 65 64.6
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 2.0e-13 78.6 68 58.8
SGA_v2.0_scaffold479G52250 Striga asiatica HOM05D004473 ORTHO05D005652 4.5e-13 77.4 65 60.0
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 5.9e-13 77.0 70 58.6
Manes.10G075803 Manihot esculenta HOM05D004473 ORTHO05D005652 5.9e-13 77.0 52 71.2
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 7.8e-13 76.6 65 67.7
HanXRQChr00c0165g0572171 Helianthus annuus HOM05D004473 ORTHO05D005652 7.8e-13 76.6 65 67.7
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 7.8e-13 76.6 65 67.7
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 7.8e-13 76.6 65 67.7
HanXRQChr16g0503961 Helianthus annuus HOM05D004473 ORTHO05D005652 7.8e-13 76.6 65 67.7
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 7.8e-13 76.6 65 67.7
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 1.0e-12 76.3 70 58.6
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 1.0e-12 76.3 70 58.6
BraSC151t45687Z Brassica rapa HOM05D004473 ORTHO05D005652 1.0e-12 76.3 70 58.6
BraSC25t45889Z Brassica rapa HOM05D004473 ORTHO05D005652 1.0e-12 76.3 70 58.6
BraSC59t46519Z Brassica rapa HOM05D004473 ORTHO05D005652 1.0e-12 76.3 70 58.6
MELO3C000879.2 Cucumis melo HOM05D004473 ORTHO05D005652 2.9e-12 74.7 56 66.1
MELO3C027497.2 Cucumis melo HOM05D004473 ORTHO05D005652 2.9e-12 74.7 56 66.1
Psat0s1330g0240 Pisum sativum HOM05D004473 ORTHO05D005652 2.9e-12 74.7 65 61.5
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 3.9e-12 74.3 70 57.1
arahy.Tifrunner.gnm1.ann1.40BINF Arachis hypogaea HOM05D004473 ORTHO05D005652 5.0e-12 73.9 67 61.2
Gohir.1Z049403 Gossypium hirsutum HOM05D004473 ORTHO05D005652 5.0e-12 73.9 63 65.1
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 5.6e-11 70.5 64 59.4
Gohir.1Z050066 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.0e-09 66.2 57 57.9
Lalb_Chr13g0292931 Lupinus albus HOM05D004473 ORTHO05D005652 1.2e-08 62.8 64 51.6
Thhalv10028154m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 2.6e-08 61.6 63 54.0
Medtr0002s0390 Medicago truncatula HOM05D004473 ORTHO05D005652 7.5e-08 60.1 66 48.5
Peaxi162Scf00211g00244 Petunia axillaris HOM05D004473 ORTHO05D005652 2.2e-07 58.5 40 67.5
Thhalv10001851m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 4.9e-07 57.4 61 50.8
CSS0010292 Camellia sinensis var. sinensis HOM05D004473 ORTHO05D005652 6.4e-07 57.0 35 77.1
arahy.Tifrunner.gnm1.ann1.EJ7WQI Arachis hypogaea HOM05D004473 ORTHO05D005652 3.2e-06 54.7 51 60.8


User provided reference genes

Program Settings