Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD15G1400000 Malus domestica HOM05D006694 ORTHO05D008240 4.4e-44 181.4 87 100.0
MD08G1215500 Malus domestica HOM05D006694 ORTHO05D008240 4.4e-36 154.8 84 86.9
Prupe.1G547200 Prunus persica HOM05D006694 ORTHO05D008240 8.1e-30 134.0 83 78.3
FvH4_3g35120 Fragaria vesca HOM05D006694 ORTHO05D008240 1.2e-25 120.2 86 67.4
FAN11G2736 Fragaria x ananassa HOM05D006694 ORTHO05D008240 1.2e-25 120.2 86 67.4
FAN25G2919 Fragaria x ananassa HOM05D006694 ORTHO05D008240 2.7e-25 119.0 86 66.3
FAN21G3540 Fragaria x ananassa HOM05D006694 ORTHO05D008240 2.3e-24 115.9 86 64.0
RcHm_v2.0_Chr5g0048941 Rosa chinensis HOM05D006694 ORTHO05D008240 3.6e-22 108.6 83 63.9
CiPaw.14G112300 Carya illinoinensis HOM05D006694 ORTHO05D008240 1.8e-21 106.3 83 61.4
FAN18G4320 Fragaria x ananassa HOM05D006694 ORTHO05D008240 3.1e-21 105.5 83 61.4
FAN08G0107 Fragaria x ananassa HOM05D006694 ORTHO05D008240 8.9e-21 104.0 86 59.3
FvH4_5g33200 Fragaria vesca HOM05D006694 ORTHO05D008240 1.3e-19 100.1 82 61.0
CSS0033907 Camellia sinensis var. sinensis HOM05D006694 ORTHO05D008240 4.2e-18 95.1 83 54.2
TWI79G1258 Tripterygium wilfordii HOM05D006694 ORTHO05D008240 9.2e-18 94.0 83 55.4
Hma1.2p1_1099F.1_g256830 Hydrangea macrophylla HOM05D006694 ORTHO05D008240 1.2e-17 93.6 82 54.9
QL01p017030 Quercus lobata HOM05D006694 ORTHO05D008240 7.8e-17 90.9 79 55.7
TAR633G1767 Trochodendron aralioides HOM05D006694 ORTHO05D008240 2.3e-16 89.4 84 47.6
Glyma.07G147400 Glycine max HOM05D006694 ORTHO05D008240 3.9e-16 88.6 82 56.1
Haze_23854 Corylus avellana HOM05D006694 ORTHO05D008240 6.6e-16 87.8 84 51.2
Lalb_Chr10g0096081 Lupinus albus HOM05D006694 ORTHO05D008240 6.6e-16 87.8 87 54.0
Haze_23236 Corylus avellana HOM05D006694 ORTHO05D008240 8.7e-16 87.4 81 54.3
LjContig00485g0019324 Lotus japonicus HOM05D006694 ORTHO05D008240 8.7e-16 87.4 88 54.5
Oeu043278.1 Olea europaea HOM05D006694 ORTHO05D008240 1.5e-15 86.7 85 51.8
Psat3g130440 Pisum sativum HOM05D006694 ORTHO05D008240 1.9e-15 86.3 89 51.7
Aqoxy1G00470 Aquilegia oxysepala HOM05D006694 ORTHO05D008240 5.6e-15 84.7 83 45.8
EL10Ac4g10114 Beta vulgaris HOM05D006694 ORTHO05D008240 7.3e-15 84.3 83 44.6
Phvul.008G105900 Phaseolus vulgaris HOM05D006694 ORTHO05D008240 9.6e-15 84.0 89 50.6
Ca_20213_v3 Cicer arietinum L. HOM05D006694 ORTHO05D008240 1.6e-14 83.2 88 50.0
Medtr7g067460 Medicago truncatula HOM05D006694 ORTHO05D008240 2.1e-14 82.8 82 52.4
AUR62006546 Chenopodium quinoa HOM05D006694 ORTHO05D008240 2.8e-14 82.4 85 44.7
Solyc07g064625.1 Solanum lycopersicum HOM05D006694 ORTHO05D008240 3.6e-14 82.0 84 50.0
Sopen07g032820 Solanum pennellii HOM05D006694 ORTHO05D008240 6.2e-14 81.3 84 50.0
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 8.1e-14 80.9 80 50.0
CAN.G337.135 Capsicum annuum HOM05D006694 ORTHO05D008240 1.1e-13 80.5 87 46.0
Lj1g0001110 Lotus japonicus HOM05D006694 ORTHO05D010126 1.4e-13 80.1 83 55.4
PGSC0003DMG400022317 Solanum tuberosum HOM05D006694 ORTHO05D008240 2.4e-13 79.3 82 48.8
Ca_07624_v3 Cicer arietinum L. HOM05D000278 ORTHO05D008240 4.0e-13 78.6 88 46.6
Nitab4.5_0000730g0020 Nicotiana tabacum HOM05D006694 ORTHO05D008240 5.3e-13 78.2 82 45.1
Sc16g0011010 Simmondsia chinensis HOM05D006694 ORTHO05D008240 5.3e-13 78.2 78 46.2
Sed0016136 Sechium edule HOM05D006694 ORTHO05D008240 6.9e-13 77.8 87 43.7
VMungo1383G3557 Vigna mungo HOM05D006694 ORTHO05D008240 6.9e-13 77.8 84 46.4
Aa31LG6G11680 Aethionema arabicum HOM05D006694 ORTHO05D008240 9.0e-13 77.4 77 51.9
Aa31LG6G5340 Aethionema arabicum HOM05D006694 ORTHO05D008240 9.0e-13 77.4 77 51.9
DCAR_024407 Daucus carota HOM05D006694 ORTHO05D008240 2.0e-12 76.3 87 43.7
Nn7g35871 Nelumbo nucifera HOM05D006694 ORTHO05D008240 2.6e-12 75.9 79 44.3
Nitab4.5_0001500g0030 Nicotiana tabacum HOM05D006694 ORTHO05D008240 2.6e-12 75.9 82 43.9
TPR.G8137 Trifolium pratense HOM05D006694 ORTHO05D008240 3.4e-12 75.5 76 51.3
Ah.06g194610 Amaranthus hybridus HOM05D006694 ORTHO05D008240 4.4e-12 75.1 82 39.0
PGR031G0070 Punica granatum HOM05D006694 ORTHO05D008240 7.6e-12 74.3 83 45.8
Aa31LG6G11690 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.3e-11 73.6 72 52.8
Aa31LG6G5330 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.3e-11 73.6 72 52.8
Aa31LG8G12540 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.7e-11 73.2 76 48.7
MBI04_g37009_MAGBIO Magnolia biondii HOM05D006694 ORTHO05D008240 2.2e-11 72.8 68 47.1
Nitab4.5_0003488g0040 Nicotiana tabacum HOM05D006694 ORTHO05D008240 3.8e-11 72.0 82 43.9
SalBow6G6418 Salvia bowleyana HOM05D006694 ORTHO05D008240 3.8e-11 72.0 84 42.9
Cfa011326 Carpinus fangiana HOM05D006694 ORTHO05D008240 6.4e-11 71.2 82 46.3
ECA238G0309 Erigeron canadensis HOM05D006295 ORTHO05D008061 1.1e-10 70.5 82 41.5
SalBow5G3658 Salvia bowleyana HOM05D006694 ORTHO05D008240 1.1e-10 70.5 83 42.2
SalBow5G5172 Salvia bowleyana HOM05D006694 ORTHO05D008240 1.1e-10 70.5 83 42.2
SalBow6G6606 Salvia bowleyana HOM05D006694 ORTHO05D008240 1.4e-10 70.1 83 42.2
Aa31LG5G8930 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.9e-10 69.7 75 49.3
ClCG03G012530 Citrullus lanatus HOM05D006694 ORTHO05D008240 1.9e-10 69.7 74 45.9
THA.LOC104800448 Tarenaya hassleriana HOM05D006694 ORTHO05D008240 1.9e-10 69.7 82 43.9
LjContig00485g0005104 Lotus japonicus HOM05D006694 ORTHO05D008240 3.2e-10 68.9 76 47.4
Nitab4.5_0000718g0300 Nicotiana tabacum HOM05D006694 ORTHO05D008240 5.4e-10 68.2 82 42.7
Aa31LG2G18100 Aethionema arabicum HOM05D006694 ORTHO05D008240 7.1e-10 67.8 71 49.3
Aa31LG5G9000 Aethionema arabicum HOM05D006694 ORTHO05D008240 7.1e-10 67.8 69 52.2
Aa31sc233G40 Aethionema arabicum HOM05D006694 ORTHO05D008240 7.1e-10 67.8 71 50.7
Aa31sc233G60 Aethionema arabicum HOM05D006694 ORTHO05D008240 7.1e-10 67.8 71 50.7
HanXRQChr14g0447481 Helianthus annuus HOM05D006694 ORTHO05D008240 7.1e-10 67.8 79 41.8
Aa31sc233G50 Aethionema arabicum HOM05D006694 ORTHO05D008240 9.3e-10 67.4 74 48.6
ATR0737G136 Amborella trichopoda HOM05D006694 ORTHO05D008240 1.2e-09 67.0 83 39.8
Thhalv10006947m.g Eutrema salsugineum HOM05D006694 ORTHO05D008240 1.2e-09 67.0 76 47.4
CsaV3_1G043500 Cucumis sativus L. HOM05D006694 ORTHO05D008240 1.6e-09 66.6 82 40.2
Eucgr.G03208 Eucalyptus grandis HOM05D006694 ORTHO05D008240 3.5e-09 65.5 78 44.9
SGA_v2.0_scaffold29G12231 Striga asiatica HOM05D006694 ORTHO05D008240 4.6e-09 65.1 87 35.6
MELO3C015109.2 Cucumis melo HOM05D006694 ORTHO05D008240 1.0e-08 63.9 73 43.8
Migut.D00664 Erythranthe guttata HOM05D006694 ORTHO05D008240 1.3e-08 63.5 82 40.2
HPP92_025503 Vanilla planifolia HOM05D062792 ORTHO05D008240 2.3e-08 62.8 76 35.5
HPP92_025533 Vanilla planifolia HOM05D062792 ORTHO05D008240 2.3e-08 62.8 76 35.5
BolC5t29875H Brassica oleracea HOM05D006694 ORTHO05D008240 5.1e-08 61.6 72 48.6
Aa31LG10G10300 Aethionema arabicum HOM05D006694 ORTHO05D008240 6.6e-08 61.2 75 46.7
Aa31sc233G30 Aethionema arabicum HOM05D006694 ORTHO05D008240 6.6e-08 61.2 71 45.1
C05p11260 Brassica napus HOM05D006694 ORTHO05D008240 6.6e-08 61.2 72 47.2
BraA06t24145Z Brassica rapa HOM05D006694 ORTHO05D008240 6.6e-08 61.2 72 45.8
CARHR235710 Cardamine hirsuta HOM05D006694 ORTHO05D008240 8.7e-08 60.8 55 54.5
Sp1g10540 Schrenkiella parvula HOM05D006694 ORTHO05D008240 1.1e-07 60.5 58 53.4
A06p09550 Brassica napus HOM05D006694 ORTHO05D008240 2.5e-07 59.3 72 44.4
Rhsim13G0208900 Rhododendron simsii HOM05D006694 ORTHO05D008240 2.5e-07 59.3 48 54.2
Aa31LG2G18070 Aethionema arabicum HOM05D006694 ORTHO05D008240 5.6e-07 58.2 68 47.1
Aa31LG2G18090 Aethionema arabicum HOM05D006694 ORTHO05D008240 5.6e-07 58.2 68 47.1
Aa31LG5G21690 Aethionema arabicum HOM05D006694 ORTHO05D008240 7.3e-07 57.8 59 52.5
ATR0681G086 Amborella trichopoda HOM05D006694 ORTHO05D008240 1.6e-06 56.6 81 35.8
ATR0737G153 Amborella trichopoda HOM05D006694 ORTHO05D008240 2.1e-06 56.2 74 37.8
Medtr6g072030 Medicago truncatula HOM05D027749 ORTHO05D048960 2.1e-06 56.2 61 41.0
AUR62011921 Chenopodium quinoa HOM05D000162 ORTHO05D000090 4.8e-06 55.1 65 38.5
EL10Ac5g10449 Beta vulgaris HOM05D000162 ORTHO05D000090 6.2e-06 54.7 65 33.8
TWI75G1134 Tripterygium wilfordii HOM05D000162 ORTHO05D000090 8.1e-06 54.3 77 35.1


User provided reference genes

Program Settings