Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD15G1396100 Malus domestica HOM05D000595 ORTHO05D004141 1.3e-23 112.1 50 100.0
QL02p060306 Quercus lobata HOM05D000595 ORTHO05D004141 1.8e-14 81.6 41 85.4
QL02p060347 Quercus lobata HOM05D000595 ORTHO05D004141 1.8e-14 81.6 41 85.4
Lalb_Chr09g0325191 Lupinus albus HOM05D000595 ORTHO05D004141 3.1e-14 80.9 40 82.5
Gohir.D02G109400 Gossypium hirsutum HOM05D000595 ORTHO05D004141 1.3e-12 75.5 41 78.0
Sabra01G0099900 Salix brachista HOM05D000595 ORTHO05D004141 1.3e-12 75.5 39 79.5
Actinidia32782 Actinidia chinensis HOM05D000595 ORTHO05D004141 1.7e-12 75.1 38 81.6
Gohir.A02G091200 Gossypium hirsutum HOM05D000595 ORTHO05D004141 1.7e-12 75.1 41 78.0
Gorai.005G124100 Gossypium raimondii HOM05D000595 ORTHO05D004141 1.7e-12 75.1 41 78.0
Cfa012657 Carpinus fangiana HOM05D000595 ORTHO05D004141 2.2e-12 74.7 36 86.1
Duzib116G0855 Durio zibethinus HOM05D000595 ORTHO05D004141 2.2e-12 74.7 41 78.0
PSO384G3519 Papaver somniferum HOM05D000595 ORTHO05D004141 2.2e-12 74.7 36 86.1
PSO782G2105 Papaver somniferum HOM05D000595 ORTHO05D004141 2.2e-12 74.7 36 86.1
Zm00001eb305980 Zea mays HOM05D000595 ORTHO05D004141 2.2e-12 74.7 41 70.7
MBI04_g21145_MAGBIO Magnolia biondii HOM05D000595 ORTHO05D004141 2.9e-12 74.3 36 86.1
Thecc.03G325300 Theobroma cacao HOM05D000595 ORTHO05D004141 2.9e-12 74.3 41 75.6
Atru.chr6.1509 Acer truncatum HOM05D000595 ORTHO05D004141 3.8e-12 73.9 38 84.2
Nn1g02038 Nelumbo nucifera HOM05D000595 ORTHO05D004141 3.8e-12 73.9 34 91.2
Aqoxy3G02180 Aquilegia oxysepala HOM05D000595 ORTHO05D004141 5.0e-12 73.6 40 75.0
Prupe.5G018900 Prunus persica HOM05D000595 ORTHO05D004141 5.0e-12 73.6 37 83.8
TAR629G2634 Trochodendron aralioides HOM05D000595 ORTHO05D004141 5.0e-12 73.6 40 77.5
DCAR_004520 Daucus carota HOM05D000595 ORTHO05D004141 6.5e-12 73.2 33 90.9
Lj8A330G11 Lonicera japonica HOM05D000595 ORTHO05D004141 6.5e-12 73.2 35 82.9
MD00G1148100 Malus domestica HOM05D000595 ORTHO05D004141 6.5e-12 73.2 37 83.8
Rhsim11G0034700 Rhododendron simsii HOM05D000595 ORTHO05D004141 6.5e-12 73.2 39 74.4
GSVIVG01022815001 Vitis vinifera HOM05D000595 ORTHO05D004141 6.5e-12 73.2 36 83.3
GSVIVG01036945001 Vitis vinifera HOM05D000595 ORTHO05D004141 6.5e-12 73.2 36 83.3
ClCG10G000900 Citrullus lanatus HOM05D000595 ORTHO05D004141 8.5e-12 72.8 36 83.3
Os07g0420700 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D004141 8.5e-12 72.8 41 70.7
SGA_v2.0_scaffold111G31354 Striga asiatica HOM05D000595 ORTHO05D004141 8.5e-12 72.8 33 90.9
Ciclev10000404m.g Citrus clementina HOM05D000595 ORTHO05D004141 1.1e-11 72.4 33 90.9
COL.COLO4_06174 Corchorus olitorius HOM05D000595 ORTHO05D004141 1.1e-11 72.4 37 83.8
Oeu042195.1 Olea europaea HOM05D000595 ORTHO05D004141 1.1e-11 72.4 41 75.6
Potri.001G129600 Populus trichocarpa HOM05D000595 ORTHO05D004141 1.1e-11 72.4 37 81.1
EL10Ac5g11905 Beta vulgaris HOM05D000595 ORTHO05D004141 1.4e-11 72.0 36 80.6
Cc00_g34630 Coffea canephora HOM05D000595 ORTHO05D004141 1.4e-11 72.0 40 77.5
Migut.E01361 Erythranthe guttata HOM05D000595 ORTHO05D004141 1.4e-11 72.0 37 81.1
HanXRQChr17g0537211 Helianthus annuus HOM05D000595 ORTHO05D004141 1.4e-11 72.0 37 78.4
Zm00001eb096920 Zea mays HOM05D000595 ORTHO05D004141 1.4e-11 72.0 41 68.3
Ciclev10000152m.g Citrus clementina HOM05D000595 ORTHO05D004141 1.9e-11 71.6 37 81.1
Eucgr.E01209 Eucalyptus grandis HOM05D000595 ORTHO05D004141 1.9e-11 71.6 37 81.1
PSO384G3949 Papaver somniferum HOM05D000595 ORTHO05D004141 1.9e-11 71.6 36 83.3
Sed0017541 Sechium edule HOM05D000595 ORTHO05D004141 1.9e-11 71.6 36 80.6
Hund14328 Selenicereus undatus HOM05D000595 ORTHO05D004141 1.9e-11 71.6 40 72.5
CiPaw.11G104000 Carya illinoinensis HOM05D000595 ORTHO05D004141 2.5e-11 71.2 40 77.5
Ca_25085_v3 Cicer arietinum L. HOM05D000595 ORTHO05D004141 2.5e-11 71.2 36 80.6
Medtr5g026610 Medicago truncatula HOM05D000595 ORTHO05D004141 2.5e-11 71.2 36 80.6
Psat2g142760 Pisum sativum HOM05D000595 ORTHO05D004141 2.5e-11 71.2 36 80.6
Psat2g142920 Pisum sativum HOM05D000595 ORTHO05D004141 2.5e-11 71.2 36 80.6
SGA_v2.0_scaffold89G27418 Striga asiatica HOM05D000595 ORTHO05D004141 2.5e-11 71.2 41 73.2
TPR.G17247 Trifolium pratense HOM05D000595 ORTHO05D004141 2.5e-11 71.2 36 80.6
Dinv37419 Davidia involucrata HOM05D000595 ORTHO05D004141 3.2e-11 70.9 37 81.1
ECA246G1180 Erigeron canadensis HOM05D000595 ORTHO05D004141 3.2e-11 70.9 44 70.5
RcHm_v2.0_Chr7g0213851 Rosa chinensis HOM05D000595 ORTHO05D004141 3.2e-11 70.9 33 84.8
RcHm_v2.0_Chr7g0213911 Rosa chinensis HOM05D000595 ORTHO05D004141 3.2e-11 70.9 33 84.8
Migut.A00539 Erythranthe guttata HOM05D000595 ORTHO05D004141 4.2e-11 70.5 37 81.1
Lsat_1_v5_gn_3_23561 Lactuca sativa HOM05D000595 ORTHO05D004141 4.2e-11 70.5 37 75.7
Lalb_Chr16g0380651 Lupinus albus HOM05D000595 ORTHO05D004141 4.2e-11 70.5 36 80.6
CSS0032199 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D004141 5.5e-11 70.1 37 78.4
Manes.15G187301 Manihot esculenta HOM05D000595 ORTHO05D004141 5.5e-11 70.1 37 75.7
MSTRG.24716 Avicennia marina HOM05D000595 ORTHO05D004141 7.2e-11 69.7 37 75.7
DCAR_004519 Daucus carota HOM05D000595 ORTHO05D004141 7.2e-11 69.7 33 87.9
Eucgr.E01212 Eucalyptus grandis HOM05D000595 ORTHO05D004141 7.2e-11 69.7 37 78.4
SalBow4G2071 Salvia bowleyana HOM05D000595 ORTHO05D004141 7.2e-11 69.7 37 78.4
CSS0018432 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D004141 9.4e-11 69.3 33 84.8
CDE01G0028 Ceratophyllum demersum HOM05D000595 ORTHO05D004141 9.4e-11 69.3 40 70.0
MELO3C013786.2 Cucumis melo HOM05D000595 ORTHO05D004141 9.4e-11 69.3 36 77.8
CsaV3_3G000980 Cucumis sativus L. HOM05D000595 ORTHO05D004141 9.4e-11 69.3 36 77.8
FAN13G2264 Fragaria x ananassa HOM05D000595 ORTHO05D004141 9.4e-11 69.3 33 84.8
Glyma.04G123900 Glycine max HOM05D000595 ORTHO05D004141 9.4e-11 69.3 36 75.0
Oeu042200.2 Olea europaea HOM05D000595 ORTHO05D004141 1.2e-10 68.9 33 84.8
Cpa.g.sc71.57 Carica papaya HOM05D000595 ORTHO05D004141 1.6e-10 68.6 40 72.5
Phvul.002G127000 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 1.6e-10 68.6 36 77.8
PGR042G2013 Punica granatum HOM05D000595 ORTHO05D004141 1.6e-10 68.6 37 75.7
Solyc08g075530.3 Solanum lycopersicum HOM05D000595 ORTHO05D004141 1.6e-10 68.6 37 78.4
Sopen08g024190 Solanum pennellii HOM05D000595 ORTHO05D004141 1.6e-10 68.6 37 78.4
Carub.0003s2391 Capsella rubella HOM05D000595 ORTHO05D004141 2.1e-10 68.2 40 72.5
Duzib116G0431 Durio zibethinus HOM05D000595 ORTHO05D004141 2.1e-10 68.2 41 70.7
Nitab4.5_0000030g0360 Nicotiana tabacum HOM05D000595 ORTHO05D004141 2.1e-10 68.2 37 78.4
Nitab4.5_0000985g0070 Nicotiana tabacum HOM05D000595 ORTHO05D004141 2.1e-10 68.2 37 78.4
Os07g0421300 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D004141 2.1e-10 68.2 35 74.3
Phvul.002G126900 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 2.1e-10 68.2 37 70.3
TPR.G39643 Trifolium pratense HOM05D000595 ORTHO05D004141 2.1e-10 68.2 36 77.8
Oeu042203.1 Olea europaea HOM05D000595 ORTHO05D004141 2.7e-10 67.8 43 67.4
Cc08_g05430 Coffea canephora HOM05D000595 ORTHO05D004141 3.6e-10 67.4 37 75.7
Sc07g0008260 Simmondsia chinensis HOM05D000595 ORTHO05D004141 3.6e-10 67.4 36 75.0
Ah.02g117460 Amaranthus hybridus HOM05D000595 ORTHO05D004141 4.7e-10 67.0 35 77.1
ECA246G0927 Erigeron canadensis HOM05D000595 ORTHO05D004141 4.7e-10 67.0 37 73.0
Lj2g0003822 Lotus japonicus HOM05D000595 ORTHO05D004141 4.7e-10 67.0 34 79.4
Manes.17G004600 Manihot esculenta HOM05D000595 ORTHO05D004141 4.7e-10 67.0 38 71.1
Thecc.10G189800 Theobroma cacao HOM05D000595 ORTHO05D004141 4.7e-10 67.0 41 70.7
FvH4_5g24150 Fragaria vesca HOM05D000595 ORTHO05D004141 6.1e-10 66.6 33 81.8
TWI60G0525 Tripterygium wilfordii HOM05D000595 ORTHO05D004141 6.1e-10 66.6 37 73.0
Oeu042228.5 Olea europaea HOM05D000595 ORTHO05D004141 7.9e-10 66.2 35 77.1
VMungo1215G0102 Vigna mungo HOM05D000595 ORTHO05D004141 7.9e-10 66.2 36 75.0
ATR0829G165 Amborella trichopoda HOM05D000595 ORTHO05D004141 1.0e-09 65.9 37 70.3
CAN.G1731.4 Capsicum annuum HOM05D000595 ORTHO05D004141 1.0e-09 65.9 33 81.8
AUR62007422 Chenopodium quinoa HOM05D000595 ORTHO05D004141 1.0e-09 65.9 33 78.8
AUR62027310 Chenopodium quinoa HOM05D000595 ORTHO05D004141 1.0e-09 65.9 33 78.8
Pp3c13_11140 Physcomitrium patens HOM05D000595 ORTHO05D004141 1.0e-09 65.9 40 67.5
Pp3c16_2470 Physcomitrium patens HOM05D000595 ORTHO05D004141 1.0e-09 65.9 37 70.3
Pp3c4_24030 Physcomitrium patens HOM05D000595 ORTHO05D004141 1.4e-09 65.5 41 63.4
AagrBONN_evm.TU.Sc2ySwM_344.2687 Anthoceros agrestis HOM05D000595 ORTHO05D004141 1.8e-09 65.1 41 63.4
BcaB04g20431 Brassica carinata HOM05D000595 ORTHO05D004141 2.3e-09 64.7 40 70.0
AL3G38380 Arabidopsis lyrata HOM05D000595 ORTHO05D004141 3.0e-09 64.3 40 70.0
AT3G23640 Arabidopsis thaliana HOM05D000595 ORTHO05D004141 3.0e-09 64.3 40 70.0
BcaB04g20429 Brassica carinata HOM05D000595 ORTHO05D004141 3.0e-09 64.3 40 70.0
A01p31400 Brassica napus HOM05D000595 ORTHO05D004141 3.0e-09 64.3 40 70.0
C01p39990 Brassica napus HOM05D000595 ORTHO05D004141 3.0e-09 64.3 40 70.0
BraA01t03265Z Brassica rapa HOM05D000595 ORTHO05D004141 3.0e-09 64.3 40 70.0
Carub.0003s2390 Capsella rubella HOM05D000595 ORTHO05D004141 3.0e-09 64.3 40 70.0
Mapoly0135s0001 Marchantia polymorpha HOM05D000595 ORTHO05D004141 3.0e-09 64.3 41 65.9
A01p31410 Brassica napus HOM05D000595 ORTHO05D004141 3.9e-09 63.9 36 75.0
C01p40000 Brassica napus HOM05D000595 ORTHO05D004141 3.9e-09 63.9 36 75.0
BolC1t03957H Brassica oleracea HOM05D000595 ORTHO05D004141 3.9e-09 63.9 36 75.0
BraA01t03266Z Brassica rapa HOM05D000595 ORTHO05D004141 3.9e-09 63.9 36 75.0
Thhalv10019990m.g Eutrema salsugineum HOM05D000595 ORTHO05D004141 3.9e-09 63.9 40 70.0
THA.LOC104822230 Tarenaya hassleriana HOM05D000595 ORTHO05D004141 3.9e-09 63.9 37 70.3
CARHR099600 Cardamine hirsuta HOM05D000595 ORTHO05D004141 5.1e-09 63.5 36 75.0
Sp3g21340 Schrenkiella parvula HOM05D000595 ORTHO05D004141 5.1e-09 63.5 36 75.0
Ciclev10011016m.g Citrus clementina HOM05D000595 ORTHO05D004141 6.7e-09 63.2 33 81.8
Pp3c3_9200 Physcomitrium patens HOM05D000595 ORTHO05D004141 8.8e-09 62.8 37 67.6
HPP92_020874 Vanilla planifolia HOM05D000595 ORTHO05D004141 1.1e-08 62.4 37 67.6
HPP92_028113 Vanilla planifolia HOM05D000595 ORTHO05D004141 1.1e-08 62.4 37 67.6
Pp3c5_4460 Physcomitrium patens HOM05D000595 ORTHO05D004141 1.5e-08 62.0 37 64.9
SMO116G0166 Selaginella moellendorffii HOM05D000595 ORTHO05D004141 4.4e-08 60.5 37 67.6
VMungo1215G1352 Vigna mungo HOM05D000595 ORTHO05D004141 2.8e-07 57.8 36 63.9
Oeu042206.1 Olea europaea HOM05D000595 ORTHO05D004141 4.8e-07 57.0 37 64.9
AagrBONN_evm.TU.Sc2ySwM_228.2586 Anthoceros agrestis HOM05D000595 ORTHO05D004141 7.0e-06 53.1 41 48.8
Haze_07995 Corylus avellana HOM05D000595 ORTHO05D004141 7.0e-06 53.1 27 81.5


User provided reference genes

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