Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 9.2e-117 423.7 234 100.0
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 8.1e-89 330.9 232 79.7
Prupe.1G524300 Prunus persica HOM05D004728 ORTHO05D002375 3.2e-45 186.0 197 57.4
RcHm_v2.0_Chr7g0238201 Rosa chinensis HOM05D004728 ORTHO05D002375 1.7e-33 147.1 220 47.7
FvH4_5g36280 Fragaria vesca HOM05D004728 ORTHO05D002375 2.1e-28 130.2 169 52.1
RcHm_v2.0_Chr7g0238181 Rosa chinensis HOM05D004728 ORTHO05D002375 2.7e-28 129.8 235 42.1
FAN13G0425 Fragaria x ananassa HOM05D004728 ORTHO05D002375 6.1e-28 128.6 171 51.5
FAN04G1034 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.0e-27 127.9 170 51.2
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 5.2e-27 125.6 210 45.2
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 3.3e-26 122.9 168 50.0
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 2.7e-23 113.2 189 48.7
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 7.7e-23 111.7 174 44.3
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 8.5e-22 108.2 204 42.6
FAN08G2352 Fragaria x ananassa HOM05D004728 ORTHO05D002375 9.4e-21 104.8 105 60.0
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 1.2e-20 104.4 155 45.8
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 1.6e-20 104.0 161 44.1
COL.COLO4_11993 Corchorus olitorius HOM05D004728 ORTHO05D002375 2.1e-20 103.6 191 42.9
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 4.7e-20 102.4 155 48.4
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 6.1e-20 102.1 181 46.4
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 1.0e-19 101.3 162 47.5
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 1.8e-19 100.5 138 50.7
Potri.002G101500 Populus trichocarpa HOM05D004728 ORTHO05D002375 2.3e-19 100.1 202 38.6
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 4.0e-19 99.4 197 41.1
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 4.0e-19 99.4 174 44.8
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 5.2e-19 99.0 124 50.8
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 6.8e-19 98.6 148 48.6
Gorai.005G094700 Gossypium raimondii HOM05D004728 ORTHO05D002375 6.8e-19 98.6 149 46.3
Gohir.A02G076900 Gossypium hirsutum HOM05D004728 ORTHO05D002375 8.8e-19 98.2 140 50.0
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.5e-18 97.4 186 43.0
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.4e-18 96.3 186 43.0
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 3.4e-18 96.3 183 41.0
Sabra02G0079600 Salix brachista HOM05D004728 ORTHO05D002375 4.4e-18 95.9 203 39.4
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 5.7e-18 95.5 215 40.5
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 7.5e-18 95.1 186 42.5
CiPaw.16G032400 Carya illinoinensis HOM05D004728 ORTHO05D002375 9.8e-18 94.7 127 49.6
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 2.8e-17 93.2 153 41.8
Duzib093G1766 Durio zibethinus HOM05D004728 ORTHO05D002375 2.8e-17 93.2 155 41.9
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 3.7e-17 92.8 160 43.1
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 1.4e-16 90.9 215 40.5
Gorai.009G233200 Gossypium raimondii HOM05D004728 ORTHO05D002375 1.4e-16 90.9 206 37.4
Duzib041G0412 Durio zibethinus HOM05D004728 ORTHO05D002375 5.4e-16 89.0 219 36.1
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 5.4e-16 89.0 147 43.5
Thecc.08G100800 Theobroma cacao HOM05D004728 ORTHO05D002375 5.4e-16 89.0 205 36.1
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 1.6e-15 87.4 177 39.0
DCAR_012879 Daucus carota HOM05D004728 ORTHO05D002375 2.7e-15 86.7 214 38.8
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 2.7e-15 86.7 203 37.9
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 4.5e-15 85.9 177 36.7
Eucgr.F00382 Eucalyptus grandis HOM05D004728 ORTHO05D002375 4.5e-15 85.9 124 45.2
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 5.9e-15 85.5 182 40.7
Gohir.D02G084100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 5.9e-15 85.5 128 47.7
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 7.7e-15 85.1 121 49.6
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.0e-14 84.7 161 31.1
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 1.3e-14 84.3 199 30.2
EL10Ac1g01137 Beta vulgaris HOM05D004728 ORTHO05D002375 1.7e-14 84.0 160 32.5
VMungo0647G1593 Vigna mungo HOM05D012119 ORTHO05D002375 1.7e-14 84.0 161 33.5
arahy.Tifrunner.gnm1.ann1.30DIRF Arachis hypogaea HOM05D012119 ORTHO05D002375 2.3e-14 83.6 180 38.3
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 2.9e-14 83.2 194 30.4
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 2.9e-14 83.2 195 38.5
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 2.9e-14 83.2 138 46.4
PSO675G6306 Papaver somniferum HOM05D004728 ORTHO05D002375 3.8e-14 82.8 149 43.6
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.5e-13 80.9 181 35.4
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.9e-13 80.5 159 37.1
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 1.9e-13 80.5 191 36.6
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 2.5e-13 80.1 145 40.7
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 2.5e-13 80.1 128 42.2
Gohir.D05G225700 Gossypium hirsutum HOM05D004728 ORTHO05D002375 3.2e-13 79.7 155 40.0
SalBow7G1327 Salvia bowleyana HOM05D004728 ORTHO05D002375 3.2e-13 79.7 162 40.1
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 3.2e-13 79.7 165 40.6
vmacro04704 Vaccinium macrocarpon HOM05D004728 ORTHO05D002375 4.2e-13 79.3 191 40.3
arahy.Tifrunner.gnm1.ann1.69RQXC Arachis hypogaea HOM05D012119 ORTHO05D002375 5.5e-13 79.0 180 36.7
ECA247G2878 Erigeron canadensis HOM05D004728 ORTHO05D002375 5.5e-13 79.0 123 43.1
Migut.C01161 Erythranthe guttata HOM05D004728 ORTHO05D002375 5.5e-13 79.0 121 45.5
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 5.5e-13 79.0 109 38.5
Prupe.6G194100 Prunus persica HOM05D004728 ORTHO05D002375 5.5e-13 79.0 98 53.1
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 2.1e-12 77.0 188 35.1
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 2.8e-12 76.6 210 38.1
Lj4A95G12 Lonicera japonica HOM05D004728 ORTHO05D002375 2.8e-12 76.6 139 42.4
Oeu000784.1 Olea europaea HOM05D004728 ORTHO05D002375 2.8e-12 76.6 126 47.6
Glyma.02G210100 Glycine max HOM05D012119 ORTHO05D002375 3.6e-12 76.3 144 35.4
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 3.6e-12 76.3 149 30.2
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 3.6e-12 76.3 186 26.9
PSO700G0018 Papaver somniferum HOM05D015253 ORTHO05D002375 6.1e-12 75.5 112 34.8
HanXRQChr17g0561041 Helianthus annuus HOM05D004728 ORTHO05D002375 8.0e-12 75.1 178 31.5
PSO541G0804 Papaver somniferum HOM05D004728 ORTHO05D002375 1.0e-11 74.7 122 46.7
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 1.0e-11 74.7 137 35.8
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.4e-11 74.3 154 31.2
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 1.4e-11 74.3 186 36.6
Potri.002G101600 Populus trichocarpa HOM05D004728 ORTHO05D002375 1.4e-11 74.3 152 40.1
MSTRG.1389 Avicennia marina HOM05D004728 ORTHO05D002375 1.8e-11 73.9 189 34.4
DCAR_003461 Daucus carota HOM05D004728 ORTHO05D002375 1.8e-11 73.9 137 37.2
arahy.Tifrunner.gnm1.ann1.RDUL0C Arachis hypogaea HOM05D012119 ORTHO05D002375 2.3e-11 73.6 132 38.6
Duzib116G0314 Durio zibethinus HOM05D004728 ORTHO05D002375 2.3e-11 73.6 131 41.2
TAR625G1009 Trochodendron aralioides HOM05D007310 ORTHO05D002375 2.3e-11 73.6 153 34.0
SGA_v2.0_scaffold24G10482 Striga asiatica HOM05D004728 ORTHO05D002375 4.0e-11 72.8 153 39.9
Actinidia10350 Actinidia chinensis HOM05D004728 ORTHO05D002375 5.2e-11 72.4 188 34.6
MELO3C011050.2 Cucumis melo HOM05D039494 ORTHO05D002375 6.8e-11 72.0 115 35.7
Lalb_Chr10g0102541 Lupinus albus HOM05D012119 ORTHO05D002375 6.8e-11 72.0 164 37.2
MSTRG.1471 Avicennia marina HOM05D004728 ORTHO05D002375 1.2e-10 71.2 124 41.1
Rhsim07G0205400 Rhododendron simsii HOM05D004728 ORTHO05D002375 1.2e-10 71.2 126 42.9
Migut.B00577 Erythranthe guttata HOM05D007310 ORTHO05D002375 1.5e-10 70.9 170 27.1
Lj4A728T43 Lonicera japonica HOM05D004728 ORTHO05D002375 1.5e-10 70.9 173 31.2
arahy.Tifrunner.gnm1.ann1.9U5DT8 Arachis hypogaea HOM05D012119 ORTHO05D002375 2.0e-10 70.5 158 34.8
Dinv24166 Davidia involucrata HOM05D007310 ORTHO05D002375 2.0e-10 70.5 154 36.4
Gohir.A05G223000 Gossypium hirsutum HOM05D004728 ORTHO05D002375 2.0e-10 70.5 180 35.0
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 2.0e-10 70.5 157 25.5
Lj4A728G42 Lonicera japonica HOM05D004728 ORTHO05D002375 2.0e-10 70.5 98 35.7
QL02p002263 Quercus lobata HOM05D004728 ORTHO05D002375 2.0e-10 70.5 132 41.7
SGA_v2.0_scaffold52G18993 Striga asiatica HOM05D004728 ORTHO05D002375 2.6e-10 70.1 144 38.9
MSTRG.25340 Avicennia marina HOM05D004728 ORTHO05D002375 3.4e-10 69.7 149 42.3
EL10Ac9g21224 Beta vulgaris HOM05D007310 ORTHO05D002375 3.4e-10 69.7 118 42.4
Migut.C01096 Erythranthe guttata HOM05D004728 ORTHO05D002375 3.4e-10 69.7 168 40.5
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 3.4e-10 69.7 160 30.6
HanXRQChr09g0250741 Helianthus annuus HOM05D004728 ORTHO05D002375 5.7e-10 68.9 223 30.9
Lsat_1_v5_gn_1_2840 Lactuca sativa HOM05D004728 ORTHO05D002375 5.7e-10 68.9 127 40.2
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 5.7e-10 68.9 123 41.5
Hund23288 Selenicereus undatus HOM05D004728 ORTHO05D002375 7.5e-10 68.6 164 32.9
CANSAT25G2000 Cannabis sativa HOM05D004728 ORTHO05D002375 9.8e-10 68.2 156 37.8
Hund14099 Selenicereus undatus HOM05D004728 ORTHO05D002375 9.8e-10 68.2 145 38.6
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.3e-09 67.8 113 33.6
Lj4A95G11 Lonicera japonica HOM05D004728 ORTHO05D002375 1.3e-09 67.8 98 46.9
Lalb_Chr17g0344311 Lupinus albus HOM05D012119 ORTHO05D002375 1.3e-09 67.8 85 35.3
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 1.3e-09 67.8 155 38.1
Hund26995 Selenicereus undatus HOM05D004728 ORTHO05D002375 1.3e-09 67.8 119 42.9
MSTRG.25397 Avicennia marina HOM05D004728 ORTHO05D002375 2.2e-09 67.0 124 41.9
Potri.001G310100 Populus trichocarpa HOM05D007310 ORTHO05D002375 3.7e-09 66.2 135 36.3
Cfa005685 Carpinus fangiana HOM05D007310 ORTHO05D002375 4.9e-09 65.9 170 34.7
Glyma.14G177800 Glycine max HOM05D012119 ORTHO05D002375 4.9e-09 65.9 160 26.9
Oeu022081.1 Olea europaea HOM05D007310 ORTHO05D002375 4.9e-09 65.9 145 33.1
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 4.9e-09 65.9 122 32.0
ECA232G3092 Erigeron canadensis HOM05D004728 ORTHO05D045252 6.3e-09 65.5 163 34.4
Hma1.2p1_1180F.1_g264660 Hydrangea macrophylla HOM05D004728 ORTHO05D002375 6.3e-09 65.5 108 47.2
Glyma.13G042400 Glycine max HOM05D007310 ORTHO05D002375 8.3e-09 65.1 124 38.7
Sc01g0000880 Simmondsia chinensis HOM05D004728 ORTHO05D002375 1.1e-08 64.7 130 40.0
Dinv13237 Davidia involucrata HOM05D004728 ORTHO05D002375 1.4e-08 64.3 152 35.5
COL.COLO4_11997 Corchorus olitorius HOM05D004728 ORTHO05D002375 2.4e-08 63.5 157 37.6
Haze_10565 Corylus avellana HOM05D007310 ORTHO05D002375 2.4e-08 63.5 178 33.1
FAN18G3056 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.4e-08 63.5 117 47.9
Lalb_Chr09g0326871 Lupinus albus HOM05D007310 ORTHO05D002375 2.4e-08 63.5 141 29.1
QL02p002250 Quercus lobata HOM05D004728 ORTHO05D002375 2.4e-08 63.5 129 42.6
PSO675G4345 Papaver somniferum HOM05D015253 ORTHO05D023059 3.1e-08 63.2 108 30.6
Aqoxy6G00704 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 4.1e-08 62.8 173 35.3
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 4.1e-08 62.8 122 41.8
MSTRG.3754 Avicennia marina HOM05D004728 ORTHO05D002375 5.4e-08 62.4 206 35.0
unitig_747.g21502 Utricularia gibba HOM05D004728 ORTHO05D002375 5.4e-08 62.4 124 44.4
VMungo0251G1327 Vigna mungo HOM05D007310 ORTHO05D002375 5.4e-08 62.4 123 39.0
DCAR_021882 Daucus carota HOM05D007310 ORTHO05D002375 9.2e-08 61.6 132 43.2
Nitab4.5_0006625g0010 Nicotiana tabacum HOM05D007310 ORTHO05D002375 9.2e-08 61.6 142 31.7
Actinidia28038 Actinidia chinensis HOM05D007310 ORTHO05D002375 1.2e-07 61.2 113 41.6
Aqoxy476s001 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.2e-07 61.2 172 34.9
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 1.2e-07 61.2 123 39.8
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.2e-07 61.2 123 39.8
RcHm_v2.0_Chr7g0236611 Rosa chinensis HOM05D007310 ORTHO05D002375 1.2e-07 61.2 198 30.8
Sopen05g029860 Solanum pennellii HOM05D000436 ORTHO05D001944 1.6e-07 60.8 183 33.9
Phvul.008G177300 Phaseolus vulgaris HOM05D012119 ORTHO05D002375 2.0e-07 60.5 161 31.1
Potri.017G050000 Populus trichocarpa HOM05D007310 ORTHO05D002375 2.0e-07 60.5 112 41.1
SGA_v2.0_scaffold48G17928 Striga asiatica HOM05D004728 ORTHO05D002375 2.0e-07 60.5 122 37.7
AUR62011722 Chenopodium quinoa HOM05D007310 ORTHO05D002375 2.7e-07 60.1 128 37.5
Solyc04g074780.4 Solanum lycopersicum HOM05D021150 ORTHO05D002375 2.7e-07 60.1 189 33.3
Ca_18369_v3 Cicer arietinum L. HOM05D007310 ORTHO05D002375 3.5e-07 59.7 141 39.0
Glyma.02G210300 Glycine max HOM05D012119 ORTHO05D002375 3.5e-07 59.7 162 25.9
Prupe.6G194200 Prunus persica HOM05D004728 ORTHO05D002375 3.5e-07 59.7 50 50.0
Sopen01g048060 Solanum pennellii HOM05D007310 ORTHO05D002375 3.5e-07 59.7 135 29.6
TAR376G0070 Trochodendron aralioides HOM05D015253 ORTHO05D002375 4.5e-07 59.3 195 26.7
AUR62012905 Chenopodium quinoa HOM05D007310 ORTHO05D002375 5.9e-07 58.9 128 36.7
PGSC0003DMG400030843 Solanum tuberosum HOM05D021150 ORTHO05D002375 5.9e-07 58.9 232 29.7
Thecc.02G133200 Theobroma cacao HOM05D007310 ORTHO05D002375 7.8e-07 58.5 146 34.9
Oeu045992.1 Olea europaea HOM05D004728 ORTHO05D002375 1.0e-06 58.2 218 32.6
Solyc01g105600.3 Solanum lycopersicum HOM05D007310 ORTHO05D002375 1.0e-06 58.2 135 28.9
MD15G1317500 Malus domestica HOM05D004728 ORTHO05D002375 1.3e-06 57.8 91 36.3
CAN.G523.36 Capsicum annuum HOM05D007310 ORTHO05D002375 1.7e-06 57.4 151 27.8
Nitab4.5_0007336g0010 Nicotiana tabacum HOM05D012586 ORTHO05D012196 1.7e-06 57.4 208 33.2
Sabra16G0196000 Salix brachista HOM05D007310 ORTHO05D002375 1.7e-06 57.4 110 40.0
PGSC0003DMG400012536 Solanum tuberosum HOM05D007310 ORTHO05D002375 1.7e-06 57.4 135 29.6
CSS0047922 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 2.3e-06 57.0 182 33.0
TPR.G2868 Trifolium pratense HOM05D007310 ORTHO05D002375 2.3e-06 57.0 161 31.1
Ciclev10030152m.g Citrus clementina HOM05D007310 ORTHO05D002375 2.9e-06 56.6 138 37.0
Psat7g100440 Pisum sativum HOM05D007310 ORTHO05D002375 2.9e-06 56.6 153 35.3
Oeu041264.1 Olea europaea HOM05D012586 ORTHO05D012196 5.0e-06 55.8 170 35.9
Oeu024506.2 Olea europaea HOM05D012586 ORTHO05D012196 6.6e-06 55.5 177 35.0
PSO541G3905 Papaver somniferum HOM05D015253 ORTHO05D023059 6.6e-06 55.5 132 27.3
TAR376G0441 Trochodendron aralioides HOM05D004728 ORTHO05D002375 6.6e-06 55.5 159 37.7
Hma1.2p1_0784F.1_g217300 Hydrangea macrophylla HOM05D007310 ORTHO05D002375 8.6e-06 55.1 115 38.3
TAR376G0136 Trochodendron aralioides HOM05D007310 ORTHO05D002375 8.6e-06 55.1 172 34.3


User provided reference genes

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