Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD15G1342600 Malus domestica HOM05D000736 ORTHO05D016041 1.4e-107 392.9 188 100.0
MD09G1117200 Malus domestica HOM05D000736 ORTHO05D007707 1.3e-44 183.7 173 58.4
QL08p029882 Quercus lobata HOM05D000736 ORTHO05D007707 1.6e-42 176.8 179 54.2
Manes.13G064800 Manihot esculenta HOM05D000736 ORTHO05D007707 2.0e-42 176.4 197 49.7
TWI75G0266 Tripterygium wilfordii HOM05D000736 ORTHO05D007707 6.0e-42 174.9 181 52.5
COL.COLO4_05386 Corchorus olitorius HOM05D000736 ORTHO05D007707 1.3e-41 173.7 194 52.1
Cfa014296 Carpinus fangiana HOM05D000736 ORTHO05D007707 1.7e-41 173.3 177 53.7
SalBow4G1832 Salvia bowleyana HOM05D000736 ORTHO05D007707 3.0e-41 172.6 179 53.1
Thecc.01G187600 Theobroma cacao HOM05D000736 ORTHO05D007707 3.0e-41 172.6 180 53.3
GSVIVG01030537001 Vitis vinifera HOM05D000736 ORTHO05D007707 3.0e-41 172.6 182 51.1
Duzib133G0031 Durio zibethinus HOM05D000736 ORTHO05D007707 5.0e-41 171.8 170 55.3
MSTRG.27459 Avicennia marina HOM05D000736 ORTHO05D007707 6.6e-41 171.4 177 52.0
Eucgr.K00728 Eucalyptus grandis HOM05D000736 ORTHO05D007707 1.1e-40 170.6 179 52.5
SalBow8G3370 Salvia bowleyana HOM05D000736 ORTHO05D007707 2.5e-40 169.5 179 52.0
Hma1.2p1_0133F.1_g060840 Hydrangea macrophylla HOM05D000736 ORTHO05D007707 3.3e-40 169.1 179 49.2
CSS0049875 Camellia sinensis var. sinensis HOM05D000736 ORTHO05D007707 4.3e-40 168.7 179 49.7
ClCG02G018200 Citrullus lanatus HOM05D000736 ORTHO05D007707 7.3e-40 167.9 191 49.7
Migut.F02001 Erythranthe guttata HOM05D000736 ORTHO05D007707 7.3e-40 167.9 179 50.3
Prupe.3G206600 Prunus persica HOM05D000736 ORTHO05D007707 9.5e-40 167.5 163 55.2
CANSAT64G0309 Cannabis sativa HOM05D000736 ORTHO05D007707 1.2e-39 167.2 181 48.1
Nitab4.5_0008746g0030 Nicotiana tabacum HOM05D000736 ORTHO05D007707 1.2e-39 167.2 180 50.0
Hma1.2p1_0133F.1_g060830 Hydrangea macrophylla HOM05D000736 ORTHO05D007707 1.6e-39 166.8 180 49.4
CsaV3_6G015580 Cucumis sativus L. HOM05D000736 ORTHO05D007707 2.1e-39 166.4 181 50.3
Dinv08704 Davidia involucrata HOM05D000736 ORTHO05D007707 2.1e-39 166.4 179 51.4
FAN14G0144 Fragaria x ananassa HOM05D000736 ORTHO05D007707 2.8e-39 166.0 179 50.8
Sed0016142 Sechium edule HOM05D000736 ORTHO05D007707 2.8e-39 166.0 179 49.2
CAN.G741.31 Capsicum annuum HOM05D000736 ORTHO05D007707 3.6e-39 165.6 179 49.7
Haze_12744 Corylus avellana HOM05D000736 ORTHO05D007707 3.6e-39 165.6 170 54.1
FAN05G5831 Fragaria x ananassa HOM05D000736 ORTHO05D007707 4.7e-39 165.2 179 50.3
Nitab4.5_0000130g0180 Nicotiana tabacum HOM05D000736 ORTHO05D007707 4.7e-39 165.2 182 48.4
Atru.chr6.3296 Acer truncatum HOM05D000736 ORTHO05D007707 8.1e-39 164.5 179 49.7
Gohir.A11G151800 Gossypium hirsutum HOM05D000736 ORTHO05D007707 8.1e-39 164.5 180 51.1
Nn1g07966 Nelumbo nucifera HOM05D000736 ORTHO05D007707 8.1e-39 164.5 187 49.2
Atru.chr6.3280 Acer truncatum HOM05D000736 ORTHO05D007707 1.1e-38 164.1 179 49.7
Potri.002G219500 Populus trichocarpa HOM05D000736 ORTHO05D007707 1.1e-38 164.1 187 47.1
Lj1A785G51 Lonicera japonica HOM05D000736 ORTHO05D007707 1.4e-38 163.7 182 48.4
RcHm_v2.0_Chr2g0157571 Rosa chinensis HOM05D000736 ORTHO05D007707 1.4e-38 163.7 174 51.1
Sp3g23320 Schrenkiella parvula HOM05D000736 ORTHO05D007707 1.4e-38 163.7 199 48.2
Gohir.D11G158800 Gossypium hirsutum HOM05D000736 ORTHO05D007707 1.8e-38 163.3 180 50.6
Gorai.007G169200 Gossypium raimondii HOM05D000736 ORTHO05D007707 1.8e-38 163.3 180 50.6
CAN.G784.5 Capsicum annuum HOM05D000736 ORTHO05D007707 5.2e-38 161.8 179 48.0
CiPaw.04G192900 Carya illinoinensis HOM05D000736 ORTHO05D007707 6.8e-38 161.4 163 54.0
MELO3C019716.2 Cucumis melo HOM05D000736 ORTHO05D007707 6.8e-38 161.4 181 48.6
Lsat_1_v5_gn_7_94701 Lactuca sativa HOM05D000736 ORTHO05D007707 8.9e-38 161.0 188 49.5
Phvul.007G154300 Phaseolus vulgaris HOM05D000736 ORTHO05D007707 8.9e-38 161.0 179 49.2
TAR624G0711 Trochodendron aralioides HOM05D000736 ORTHO05D007707 1.5e-37 160.2 179 50.3
Glyma.13G128000 Glycine max HOM05D000736 ORTHO05D007707 5.8e-37 158.3 170 50.6
Medtr1g069385 Medicago truncatula HOM05D000736 ORTHO05D007707 5.8e-37 158.3 179 48.0
Lj5g0007920 Lotus japonicus HOM05D000736 ORTHO05D007707 7.5e-37 157.9 170 51.8
PGR004G0976 Punica granatum HOM05D000736 ORTHO05D007707 7.5e-37 157.9 190 47.9
BcaB08g34480 Brassica carinata HOM05D000736 ORTHO05D007707 9.9e-37 157.5 168 51.8
HanXRQChr16g0508321 Helianthus annuus HOM05D000736 ORTHO05D007707 9.9e-37 157.5 180 48.3
Hund24130 Selenicereus undatus HOM05D000736 ORTHO05D007707 9.9e-37 157.5 173 48.0
Sabra02G0171100 Salix brachista HOM05D000736 ORTHO05D007707 1.3e-36 157.1 171 49.1
Peaxi162Scf01333g00134 Petunia axillaris HOM05D000736 ORTHO05D007707 1.7e-36 156.8 170 49.4
Lalb_Chr06g0170771 Lupinus albus HOM05D000736 ORTHO05D007707 2.2e-36 156.4 192 46.4
PGSC0003DMG400006426 Solanum tuberosum HOM05D000736 ORTHO05D007707 2.2e-36 156.4 179 48.0
SGA_v2.0_scaffold478G52232 Striga asiatica HOM05D000736 ORTHO05D007707 2.2e-36 156.4 177 48.6
VMungo0720G0104 Vigna mungo HOM05D000736 ORTHO05D007707 2.2e-36 156.4 179 48.0
AT2G04540 Arabidopsis thaliana HOM05D000736 ORTHO05D007707 2.9e-36 156.0 180 48.9
MBI13_g30073_MAGBIO Magnolia biondii HOM05D000736 ORTHO05D007707 2.9e-36 156.0 179 48.6
Solyc07g049570.3 Solanum lycopersicum HOM05D000736 ORTHO05D007707 2.9e-36 156.0 179 48.0
Sopen07g024970 Solanum pennellii HOM05D000736 ORTHO05D007707 3.7e-36 155.6 179 48.0
Ca_09638_v3 Cicer arietinum L. HOM05D000736 ORTHO05D007707 6.4e-36 154.8 170 50.6
Cc04_g10360 Coffea canephora HOM05D000736 ORTHO05D007707 6.4e-36 154.8 190 47.9
Ciclev10015116m.g Citrus clementina HOM05D000736 ORTHO05D007707 1.1e-35 154.1 179 47.5
DCAR_019736 Daucus carota HOM05D000736 ORTHO05D007707 1.4e-35 153.7 165 49.7
Glyma.10G041100 Glycine max HOM05D000736 ORTHO05D007707 1.4e-35 153.7 170 48.8
Aa31sc76G30 Aethionema arabicum HOM05D000736 ORTHO05D007707 1.9e-35 153.3 182 47.3
arahy.Tifrunner.gnm1.ann1.T4YVHB Arachis hypogaea HOM05D000736 ORTHO05D007707 1.9e-35 153.3 197 44.7
CSS0040036 Camellia sinensis var. sinensis HOM05D000736 ORTHO05D007707 1.9e-35 153.3 163 50.3
Thhalv10002523m.g Eutrema salsugineum HOM05D000736 ORTHO05D007707 1.9e-35 153.3 199 47.2
TPR.G17941 Trifolium pratense HOM05D000736 ORTHO05D007707 1.9e-35 153.3 170 49.4
Aqoxy1G04108 Aquilegia oxysepala HOM05D000736 ORTHO05D007707 2.4e-35 152.9 179 44.1
AL3G42180 Arabidopsis lyrata HOM05D000736 ORTHO05D007707 2.4e-35 152.9 199 46.2
PSO210G3553 Papaver somniferum HOM05D000736 ORTHO05D007707 3.2e-35 152.5 179 48.0
PSO302G0194 Papaver somniferum HOM05D000736 ORTHO05D007707 5.4e-35 151.8 179 47.5
BcaC01g03196 Brassica carinata HOM05D000736 ORTHO05D007707 7.1e-35 151.4 203 46.3
A03p44380 Brassica napus HOM05D000736 ORTHO05D007707 7.1e-35 151.4 168 50.6
BolC3t17774H Brassica oleracea HOM05D000736 ORTHO05D007707 7.1e-35 151.4 203 46.3
Oeu043936.2 Olea europaea HOM05D000736 ORTHO05D007707 7.1e-35 151.4 208 42.8
THA.LOC104808867 Tarenaya hassleriana HOM05D000736 ORTHO05D007707 7.1e-35 151.4 183 47.0
BraA03t13568Z Brassica rapa HOM05D000736 ORTHO05D007707 9.2e-35 151.0 200 46.0
FAN02G0028 Fragaria x ananassa HOM05D000736 ORTHO05D007707 1.2e-34 150.6 169 49.7
Cpa.g.sc132.49 Carica papaya HOM05D000736 ORTHO05D007707 2.1e-34 149.8 229 42.4
Sc20g0005080 Simmondsia chinensis HOM05D000736 ORTHO05D007707 2.1e-34 149.8 174 47.1
FAN09G3712 Fragaria x ananassa HOM05D000736 ORTHO05D007707 3.5e-34 149.1 166 49.4
BcaNung05983 Brassica carinata HOM05D000736 ORTHO05D007707 1.3e-33 147.1 163 50.9
arahy.Tifrunner.gnm1.ann1.L1XSI7 Arachis hypogaea HOM05D000736 ORTHO05D007707 2.3e-33 146.4 170 47.1
CDE07G0785 Ceratophyllum demersum HOM05D000736 ORTHO05D007707 3.9e-33 145.6 194 42.3
ECA236G4050 Erigeron canadensis HOM05D000736 ORTHO05D007707 5.1e-33 145.2 163 50.3
C03p54990 Brassica napus HOM05D000736 ORTHO05D007707 6.6e-33 144.8 166 50.0
unitig_85.g27432 Utricularia gibba HOM05D000736 ORTHO05D007707 1.5e-32 143.7 170 46.5
Rhsim06G0170000 Rhododendron simsii HOM05D000736 ORTHO05D007707 1.9e-32 143.3 163 46.6
EL10Ac9g22789 Beta vulgaris HOM05D000736 ORTHO05D007707 5.6e-32 141.7 169 46.2
ATR1101G028 Amborella trichopoda HOM05D000736 ORTHO05D007707 1.6e-31 140.2 179 45.3
Carub.0003s2617 Capsella rubella HOM05D000736 ORTHO05D007707 1.4e-30 137.1 160 49.4
AUR62017566 Chenopodium quinoa HOM05D000736 ORTHO05D007707 1.4e-30 137.1 169 45.6
AUR62015104 Chenopodium quinoa HOM05D000736 ORTHO05D007707 1.2e-29 134.0 167 45.5
Ah.01g001800 Amaranthus hybridus HOM05D003198 ORTHO05D007707 5.8e-29 131.7 198 39.4
vmacro12143 Vaccinium macrocarpon HOM05D000736 ORTHO05D007707 5.4e-27 125.2 107 53.3
Eucgr.L03681 Eucalyptus grandis HOM05D000736 ORTHO05D007707 1.6e-26 123.6 91 62.6
BcaB08g36033 Brassica carinata HOM05D000736 ORTHO05D016041 3.5e-26 122.5 135 50.4
HPP92_002526 Vanilla planifolia HOM05D000736 ORTHO05D007707 5.1e-25 118.6 175 39.4
SEGI_02920 Sequoiadendron giganteum HOM05D000736 ORTHO05D007707 3.3e-24 115.9 179 38.0
BcaB07g34061 Brassica carinata HOM05D000736 ORTHO05D016041 4.3e-24 115.5 78 69.2
BcaB06g25883 Brassica carinata HOM05D000736 ORTHO05D016041 2.8e-23 112.8 78 67.9
BcaB05g23169 Brassica carinata HOM05D001355 ORTHO05D016041 3.6e-23 112.5 78 67.9
Lsat_1_v5_gn_6_99820 Lactuca sativa HOM05D000736 ORTHO05D007707 1.4e-22 110.5 163 41.7
BcaB02g07198 Brassica carinata HOM05D001527 ORTHO05D016041 3.1e-22 109.4 80 63.8
Sopen07g024940 Solanum pennellii HOM05D000736 ORTHO05D016041 1.5e-21 107.1 74 64.9
Hund24199 Selenicereus undatus HOM05D000004 ORTHO05D007707 7.6e-21 104.8 86 54.7
Zm00001eb236130 Zea mays HOM05D000736 ORTHO05D007707 8.4e-20 101.3 178 37.1
Psat6g215480 Pisum sativum HOM05D000736 ORTHO05D016041 1.3e-17 94.0 86 55.8
Pp3c13_3620 Physcomitrium patens HOM05D000736 ORTHO05D007707 4.3e-16 89.0 174 33.3
BcaB03g16111 Brassica carinata HOM05D000736 ORTHO05D007707 5.6e-16 88.6 120 45.8
Duzib138G1396 Durio zibethinus HOM05D000736 ORTHO05D007707 1.6e-15 87.0 108 46.3
CBR_g41120 Chara braunii HOM05D000736 ORTHO05D007707 2.8e-15 86.3 177 32.2
BcaB06g25882 Brassica carinata HOM05D000736 ORTHO05D016041 3.6e-15 85.9 66 62.1
SMO203G0198 Selaginella moellendorffii HOM05D000736 ORTHO05D007707 4.8e-15 85.5 183 29.0
Psat6g064360 Pisum sativum HOM05D000736 ORTHO05D016041 4.5e-13 79.0 56 64.3
Mapoly0191s0005 Marchantia polymorpha HOM05D000736 ORTHO05D007707 1.3e-12 77.4 178 28.1
Psat5g269320 Pisum sativum HOM05D000736 ORTHO05D007707 6.4e-12 75.1 159 34.6
FvH4_6g41780 Fragaria vesca HOM05D000736 ORTHO05D007707 5.6e-08 62.0 52 65.4
Cre10.g438050 Chlamydomonas reinhardtii HOM05D000736 ORTHO05D007707 1.1e-06 57.8 70 38.6
MCO03G093 Micromonas commoda HOM05D000736 ORTHO05D007707 9.0e-06 54.7 124 27.4


User provided reference genes

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