Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 1.3e-94 349.7 186 100.0
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 3.7e-68 261.9 186 76.9
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 7.4e-61 237.7 188 72.9
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 4.8e-60 235.0 191 72.3
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 6.3e-60 234.6 191 71.7
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 1.8e-59 233.0 194 66.0
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 6.9e-59 231.1 195 65.6
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 1.2e-58 230.3 182 70.9
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 1.9e-56 223.0 195 67.7
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 7.2e-56 221.1 189 67.2
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 1.2e-55 220.3 192 66.7
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 2.1e-55 219.5 184 64.7
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 6.1e-55 218.0 198 64.1
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.0e-54 217.2 182 64.3
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 1.8e-54 216.5 190 63.2
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 1.8e-54 216.5 190 63.2
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.8e-54 216.5 182 63.7
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 1.8e-54 216.5 182 63.7
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 3.9e-54 215.3 195 65.6
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 1.1e-53 213.8 185 64.9
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 1.5e-53 213.4 186 64.0
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 1.5e-53 213.4 185 64.3
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 2.0e-53 213.0 185 62.2
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 2.6e-53 212.6 182 65.4
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 3.3e-53 212.2 191 63.9
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 4.4e-53 211.8 198 62.1
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 2.2e-52 209.5 197 61.9
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 2.2e-52 209.5 202 61.4
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 2.8e-52 209.1 192 62.0
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 8.2e-52 207.6 186 63.4
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 8.2e-52 207.6 190 61.1
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 8.2e-52 207.6 187 62.6
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 2.4e-51 206.1 188 62.2
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 2.4e-51 206.1 184 62.5
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 3.1e-51 205.7 190 62.1
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 4.1e-51 205.3 193 62.7
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 4.1e-51 205.3 193 61.1
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 7.0e-51 204.5 193 62.2
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 9.1e-51 204.1 192 62.0
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 1.2e-50 203.8 178 64.6
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 1.2e-50 203.8 189 60.8
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 4.5e-50 201.8 194 60.3
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 5.9e-50 201.4 197 59.9
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 7.7e-50 201.1 179 60.9
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 1.0e-49 200.7 190 60.5
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 1.0e-49 200.7 198 60.6
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 1.0e-49 200.7 192 58.3
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 2.9e-49 199.1 188 60.6
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 2.9e-49 199.1 202 58.9
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 3.8e-49 198.7 197 58.9
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 3.8e-49 198.7 189 60.8
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 5.0e-49 198.4 192 62.0
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 5.0e-49 198.4 188 61.2
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 5.0e-49 198.4 189 60.8
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 1.4e-48 196.8 197 58.4
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 1.9e-48 196.4 193 60.6
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 3.2e-48 195.7 192 60.4
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 3.2e-48 195.7 186 61.3
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 5.5e-48 194.9 195 58.5
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 5.5e-48 194.9 195 58.5
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 5.5e-48 194.9 195 58.5
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 5.5e-48 194.9 195 58.5
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 7.2e-48 194.5 194 59.8
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 1.2e-47 193.7 195 57.9
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 1.6e-47 193.4 193 60.1
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 3.6e-47 192.2 198 57.1
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 4.7e-47 191.8 190 58.9
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 4.7e-47 191.8 199 56.3
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 1.0e-46 190.7 192 58.3
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 5.2e-46 188.3 184 57.6
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 5.2e-46 188.3 195 59.5
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 6.7e-46 188.0 194 57.2
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 6.7e-46 188.0 200 57.0
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 8.8e-46 187.6 198 57.1
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 8.8e-46 187.6 192 58.9
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 1.5e-45 186.8 181 58.6
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 2.0e-45 186.4 181 60.2
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 2.6e-45 186.0 200 55.0
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 3.3e-45 185.7 191 57.1
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 1.7e-44 183.3 165 60.0
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 3.7e-44 182.2 201 55.7
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 1.1e-43 180.6 149 62.4
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 1.8e-43 179.9 198 53.0
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 9.1e-43 177.6 198 51.0
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 7.7e-42 174.5 187 54.0
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 1.0e-41 174.1 187 55.1
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 2.2e-41 172.9 161 59.0
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 6.5e-41 171.4 188 51.1
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 8.5e-41 171.0 188 51.1
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 1.1e-40 170.6 149 61.7
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 1.5e-40 170.2 206 50.5
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 1.5e-40 170.2 131 67.9
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 1.5e-40 170.2 197 50.3
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 1.9e-40 169.9 202 50.5
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 8.0e-39 164.5 146 59.6
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 1.4e-38 163.7 180 52.2
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 8.8e-38 161.0 187 52.4
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 3.7e-36 155.6 191 50.3
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 6.3e-36 154.8 143 55.9
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 8.3e-36 154.5 144 55.6
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 2.9e-33 146.0 144 50.0
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 6.5e-33 144.8 199 42.7
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 6.6e-25 118.2 112 66.1
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 2.3e-22 109.8 86 66.3
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 2.0e-21 106.7 138 47.1
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 1.4e-19 100.5 154 38.3
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 3.1e-19 99.4 114 45.6
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 5.6e-16 88.6 115 52.2
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 7.3e-16 88.2 143 35.7
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 8.9e-14 81.3 138 37.7
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 3.4e-13 79.3 137 32.1
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 8.3e-12 74.7 133 33.1
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 2.4e-11 73.2 143 32.2
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 7.0e-11 71.6 71 54.9
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 1.2e-10 70.9 104 41.3
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 3.5e-10 69.3 133 33.1


User provided reference genes

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