Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD15G1276100 Malus domestica HOM05D006685 ORTHO05D008244 0.0e+00 1344.7 670 100.0
Prupe.7G141900 Prunus persica HOM05D006685 ORTHO05D008244 6.6e-261 904.0 701 68.0
RcHm_v2.0_Chr2g0103811 Rosa chinensis HOM05D006685 ORTHO05D008244 3.4e-257 891.7 703 67.4
FAN28G0684 Fragaria x ananassa HOM05D006685 ORTHO05D008244 1.2e-249 866.7 698 65.2
FvH4_1g14850 Fragaria vesca HOM05D006685 ORTHO05D008244 2.0e-249 865.9 700 65.0
FAN26G3106 Fragaria x ananassa HOM05D006685 ORTHO05D008244 1.0e-245 853.6 730 62.3
FAN28G1646 Fragaria x ananassa HOM05D006685 ORTHO05D008244 3.7e-243 845.1 684 64.6
RcHm_v2.0_Chr1g0329901 Rosa chinensis HOM05D006685 ORTHO05D008244 3.8e-240 835.1 709 64.0
FAN23G0082 Fragaria x ananassa HOM05D006685 ORTHO05D008244 1.9e-239 832.8 684 63.9
Cfa004216 Carpinus fangiana HOM05D006685 ORTHO05D008244 1.7e-184 650.2 716 51.1
QL06p043714 Quercus lobata HOM05D006685 ORTHO05D008244 3.3e-183 646.0 716 50.4
CANSAT01G2373 Cannabis sativa HOM05D006685 ORTHO05D008244 3.5e-169 599.4 699 49.2
Duzib187G0300 Durio zibethinus HOM05D006685 ORTHO05D008244 7.3e-167 591.7 693 47.9
Dinv26751 Davidia involucrata HOM05D006685 ORTHO05D008244 1.5e-164 583.9 701 48.1
Thecc.01G048300 Theobroma cacao HOM05D006685 ORTHO05D008244 7.5e-164 581.6 693 47.5
Manes.13G130000 Manihot esculenta HOM05D006685 ORTHO05D008244 9.8e-164 581.3 706 48.2
MD06G1092200 Malus domestica HOM05D006685 ORTHO05D008244 2.1e-161 573.5 315 90.8
Potri.005G133500 Populus trichocarpa HOM05D006685 ORTHO05D008244 1.0e-160 571.2 711 47.7
TAR376G1120 Trochodendron aralioides HOM05D006685 ORTHO05D008244 3.9e-160 569.3 745 45.2
Atru.chr3.446 Acer truncatum HOM05D006685 ORTHO05D008244 1.5e-159 567.4 728 45.9
Actinidia36520 Actinidia chinensis HOM05D006685 ORTHO05D008244 4.7e-158 562.4 705 45.2
CiPaw.02G011900 Carya illinoinensis HOM05D006685 ORTHO05D008244 1.2e-156 557.8 712 46.5
Hma1.2p1_0546F.1_g176210 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 6.4e-155 552.0 601 51.6
Sabra05G0107200 Salix brachista HOM05D006685 ORTHO05D008244 2.4e-149 533.5 703 46.1
Lj7A20T60 Lonicera japonica HOM05D006685 ORTHO05D008244 5.8e-148 528.9 615 48.3
CSS0018173 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 2.4e-146 523.5 708 43.4
Gohir.A12G068800 Gossypium hirsutum HOM05D006685 ORTHO05D008244 4.2e-146 522.7 693 45.7
Gorai.008G072600 Gossypium raimondii HOM05D006685 ORTHO05D008244 1.7e-144 517.3 693 45.3
Gohir.D12G090400 Gossypium hirsutum HOM05D006685 ORTHO05D008244 6.6e-144 515.4 692 45.2
Medtr8g079100 Medicago truncatula HOM05D006685 ORTHO05D008244 5.3e-141 505.8 715 42.4
COL.COLO4_11329 Corchorus olitorius HOM05D006685 ORTHO05D008244 6.9e-141 505.4 691 43.3
Phvul.003G248400 Phaseolus vulgaris HOM05D006685 ORTHO05D008244 1.2e-140 504.6 713 42.1
VMungo0251G1647 Vigna mungo HOM05D006685 ORTHO05D008244 1.4e-138 497.7 702 42.3
Glyma.02G062800 Glycine max HOM05D006685 ORTHO05D008244 2.4e-138 496.9 711 42.5
TPR.G30340 Trifolium pratense HOM05D006685 ORTHO05D008244 7.1e-138 495.4 706 42.6
Aqoxy6G00915 Aquilegia oxysepala HOM05D006685 ORTHO05D008244 8.7e-136 488.4 705 42.4
CARHR159940 Cardamine hirsuta HOM05D006685 ORTHO05D008244 6.2e-134 482.3 679 42.6
Psat4g089520 Pisum sativum HOM05D006685 ORTHO05D008244 2.0e-132 477.2 701 41.1
Sc03g0001280 Simmondsia chinensis HOM05D006685 ORTHO05D008244 2.0e-132 477.2 707 41.3
Hund16306 Selenicereus undatus HOM05D006685 ORTHO05D008244 5.8e-132 475.7 707 41.6
Ciclev10025347m.g Citrus clementina HOM05D006685 ORTHO05D008244 7.6e-132 475.3 561 49.0
Lalb_Chr16g0388451 Lupinus albus HOM05D006685 ORTHO05D008244 2.4e-130 470.3 702 41.3
Sed0001332 Sechium edule HOM05D006685 ORTHO05D008244 1.5e-127 461.1 709 41.5
Lj4g0023849 Lotus japonicus HOM05D006685 ORTHO05D008244 4.3e-127 459.5 714 38.7
AT3G50430 Arabidopsis thaliana HOM05D006685 ORTHO05D008244 1.6e-126 457.6 680 41.2
Hma1.2p1_0546F.1_g176200 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 8.1e-126 455.3 579 46.1
Thhalv10010194m.g Eutrema salsugineum HOM05D006685 ORTHO05D008244 1.4e-125 454.5 676 42.8
vmacro05297 Vaccinium macrocarpon HOM05D006685 ORTHO05D008244 5.3e-125 452.6 690 39.4
ClCG02G012840 Citrullus lanatus HOM05D006685 ORTHO05D008244 6.9e-125 452.2 732 41.1
Sopen02g034940 Solanum pennellii HOM05D006685 ORTHO05D008244 5.8e-124 449.1 702 39.0
AL5G30586 Arabidopsis lyrata HOM05D006685 ORTHO05D008244 1.0e-123 448.4 688 41.3
DCAR_025691 Daucus carota HOM05D006685 ORTHO05D008244 1.7e-123 447.6 617 41.0
Sp5g11730 Schrenkiella parvula HOM05D006685 ORTHO05D008244 2.9e-123 446.8 682 41.3
PGSC0003DMG402010073 Solanum tuberosum HOM05D006685 ORTHO05D008244 7.1e-122 442.2 701 40.4
Cc07_g05580 Coffea canephora HOM05D006685 ORTHO05D008244 2.7e-121 440.3 709 39.8
Eucgr.I01015 Eucalyptus grandis HOM05D006685 ORTHO05D008244 7.9e-121 438.7 577 45.1
Nitab4.5_0001014g0040 Nicotiana tabacum HOM05D006685 ORTHO05D008244 1.0e-120 438.3 690 40.0
Nn5g29383 Nelumbo nucifera HOM05D006685 ORTHO05D008244 4.3e-119 433.0 596 42.4
MBI16_g19900_MAGBIO Magnolia biondii HOM05D006685 ORTHO05D008244 7.4e-119 432.2 639 43.5
CsaV3_2G016900 Cucumis sativus L. HOM05D006685 ORTHO05D008244 6.3e-118 429.1 701 40.8
Migut.H00483 Erythranthe guttata HOM05D006685 ORTHO05D008244 8.2e-118 428.7 667 41.2
BcaB05g23218 Brassica carinata HOM05D006685 ORTHO05D008244 4.1e-117 426.4 681 39.8
BraA01t02325Z Brassica rapa HOM05D006685 ORTHO05D008244 1.2e-116 424.9 668 40.3
PSO541G3044 Papaver somniferum HOM05D006685 ORTHO05D008244 1.2e-116 424.9 716 38.3
Aa31LG4G18660 Aethionema arabicum HOM05D006685 ORTHO05D008244 1.0e-115 421.8 699 38.5
Lj7A17G42 Lonicera japonica HOM05D006685 ORTHO05D008244 2.9e-115 420.2 580 44.0
Solyc02g090260.3 Solanum lycopersicum HOM05D006685 ORTHO05D008244 5.5e-114 416.0 683 38.9
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 1.2e-113 414.8 678 38.9
PGR119G2375 Punica granatum HOM05D006685 ORTHO05D008244 2.7e-113 413.7 702 39.5
CAN.G836.36 Capsicum annuum HOM05D006685 ORTHO05D008244 3.5e-113 413.3 690 38.0
HanXRQChr12g0378291 Helianthus annuus HOM05D006685 ORTHO05D008244 4.6e-113 412.9 664 40.2
BolC1t02922H Brassica oleracea HOM05D006685 ORTHO05D008244 3.0e-112 410.2 671 39.2
Nitab4.5_0000108g0340 Nicotiana tabacum HOM05D006685 ORTHO05D008244 3.9e-112 409.8 709 38.5
C01p29820 Brassica napus HOM05D006685 ORTHO05D008244 5.1e-112 409.5 661 39.3
A01p24130 Brassica napus HOM05D006685 ORTHO05D008244 1.6e-110 404.4 660 39.5
THA.LOC104821263 Tarenaya hassleriana HOM05D006685 ORTHO05D008244 1.8e-109 401.0 622 40.5
Peaxi162Scf00993g00018 Petunia axillaris HOM05D006685 ORTHO05D008244 3.1e-109 400.2 590 40.5
Ca_22212_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 1.9e-106 391.0 680 37.2
MELO3C020890.2 Cucumis melo HOM05D006685 ORTHO05D008244 3.0e-104 383.6 747 37.2
SGA_v2.0_scaffold204G41611 Striga asiatica HOM05D006685 ORTHO05D008244 5.1e-104 382.9 639 38.0
Carub.0005s1677 Capsella rubella HOM05D006685 ORTHO05D008244 1.7e-102 377.9 480 44.2
Ca_22230_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 9.1e-101 372.1 668 36.5
Cpa.g.sc76.25 Carica papaya HOM05D006685 ORTHO05D008244 4.4e-95 353.2 409 47.9
Lsat_1_v5_gn_3_92360 Lactuca sativa HOM05D006685 ORTHO05D008244 2.2e-91 340.9 668 35.8
ATR0733G107 Amborella trichopoda HOM05D006685 ORTHO05D008244 3.8e-91 340.1 733 35.2
ECA246G1174 Erigeron canadensis HOM05D006685 ORTHO05D008244 3.8e-91 340.1 702 35.9
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 1.9e-90 337.8 574 36.9
BcaC09g50030 Brassica carinata HOM05D006685 ORTHO05D008244 1.0e-88 332.0 586 36.9
Haze_15195 Corylus avellana HOM05D006685 ORTHO05D008244 1.1e-87 328.6 728 33.9
Oeu003945.1 Olea europaea HOM05D006685 ORTHO05D008244 4.1e-85 320.1 342 49.1
PGR044G2727 Punica granatum HOM05D006685 ORTHO05D008244 2.0e-84 317.8 413 45.0
HPP92_017771 Vanilla planifolia HOM05D006685 ORTHO05D008244 1.7e-83 314.7 676 33.9
AUR62003829 Chenopodium quinoa HOM05D006685 ORTHO05D008244 2.5e-82 310.8 430 41.9
Zm00001eb209650 Zea mays HOM05D006685 ORTHO05D008244 1.3e-78 298.5 691 34.6
Zm00001eb209640 Zea mays HOM05D006685 ORTHO05D008244 3.1e-77 293.9 691 34.3
arahy.Tifrunner.gnm1.ann1.5EE2XW Arachis hypogaea HOM05D006685 ORTHO05D008244 9.1e-77 292.4 389 40.9
AUR62001974 Chenopodium quinoa HOM05D006685 ORTHO05D008244 2.9e-75 287.3 699 31.8
Os07g0120700 Oryza sativa ssp. japonica HOM05D006685 ORTHO05D008244 1.5e-71 275.0 687 31.7
unitig_749.g14219 Utricularia gibba HOM05D006685 ORTHO05D008244 5.4e-61 240.0 389 39.3
CSS0022206 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 5.9e-60 236.5 337 40.7
FAN28G0437 Fragaria x ananassa HOM05D006685 ORTHO05D008244 4.4e-55 220.3 191 64.9
CDE07G0460 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 2.8e-33 147.9 369 31.4
Prupe.5G239300 Prunus persica HOM05D006685 ORTHO05D008244 4.4e-31 140.6 98 74.5
GSVIVG01002723001 Vitis vinifera HOM05D006685 ORTHO05D008244 4.4e-31 140.6 155 52.3
GSVIVG01036190001 Vitis vinifera HOM05D006685 ORTHO05D008244 4.9e-30 137.1 182 42.9
MD06G1092300 Malus domestica HOM05D006685 ORTHO05D008244 6.4e-30 136.7 77 88.3
Mapoly0122s0032 Marchantia polymorpha HOM05D006685 ORTHO05D008244 2.1e-20 105.1 652 23.3
unitig_78.g29629 Utricularia gibba HOM05D006685 ORTHO05D008244 2.5e-18 98.2 292 28.1
ATR0733G174 Amborella trichopoda HOM05D006685 ORTHO05D008244 4.3e-18 97.4 136 44.9
MD06G1092100 Malus domestica HOM05D006685 ORTHO05D008244 5.6e-18 97.1 65 80.0
FAN05G3710 Fragaria x ananassa HOM05D006685 ORTHO05D008244 7.4e-18 96.7 61 80.3
FAN08G2647 Fragaria x ananassa HOM05D006685 ORTHO05D008244 7.4e-18 96.7 61 80.3
CDE07G1850 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 1.8e-16 92.0 243 29.6
SEGI_02281 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 6.9e-16 90.1 308 28.2
FAN28G0452 Fragaria x ananassa HOM05D006685 ORTHO05D008244 1.2e-15 89.4 57 77.2
Pp3c3_30590 Physcomitrium patens HOM05D006685 ORTHO05D008244 3.8e-14 84.3 188 31.9
SEGI_32623 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 4.3e-10 70.9 263 28.1
SEGI_38886 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 8.2e-09 66.6 173 31.2
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 1.8e-08 65.5 120 36.7
SEGI_35306 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 1.8e-08 65.5 134 34.3
AagrBONN_evm.TU.Sc2ySwM_228.383 Anthoceros agrestis HOM05D039764 ORTHO05D031174 2.0e-07 62.0 327 26.6
arahy.Tifrunner.gnm1.ann1.6LA5S9 Arachis hypogaea HOM05D002494 ORTHO05D002673 8.4e-06 56.6 30 83.3
arahy.Tifrunner.gnm1.ann1.G2N9P3 Arachis hypogaea HOM05D000296 ORTHO05D008244 8.4e-06 56.6 30 83.3


User provided reference genes

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