Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD15G1268400 Malus domestica HOM05D008040 ORTHO05D010075 4.8e-145 517.7 243 100.0
Prupe.7G151200 Prunus persica HOM05D008040 ORTHO05D010075 3.8e-49 199.1 229 49.3
MD12G1051600 Malus domestica HOM05D008040 ORTHO05D010075 2.0e-34 150.2 192 47.9
MD12G1211200 Malus domestica HOM05D008040 ORTHO05D010075 6.5e-33 145.2 193 48.2
RcHm_v2.0_Chr2g0102901 Rosa chinensis HOM05D008040 ORTHO05D010075 4.8e-28 129.0 210 41.4
FvH4_1g14191 Fragaria vesca HOM05D008040 ORTHO05D010075 1.6e-26 124.0 186 41.9
FAN19G2662 Fragaria x ananassa HOM05D008040 ORTHO05D010075 1.6e-26 124.0 186 41.9
RcHm_v2.0_Chr2g0102561 Rosa chinensis HOM05D008040 ORTHO05D010075 7.7e-26 121.7 180 45.0
FAN26G0836 Fragaria x ananassa HOM05D008040 ORTHO05D010075 8.6e-25 118.2 234 36.8
FvH4_1g14071 Fragaria vesca HOM05D008040 ORTHO05D010075 3.3e-24 116.3 234 36.8
FAN19G2417 Fragaria x ananassa HOM05D008040 ORTHO05D010075 3.3e-24 116.3 227 37.4
FAN23G2403 Fragaria x ananassa HOM05D008040 ORTHO05D010075 3.4e-21 106.3 213 38.0
Sabra08G0010200 Salix brachista HOM05D008040 ORTHO05D010075 4.4e-13 79.3 174 32.8
FAN28G2855 Fragaria x ananassa HOM05D008040 ORTHO05D010075 1.7e-12 77.4 130 41.5
COL.COLO4_10414 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.9e-11 73.9 157 34.4
Oeu009728.1 Olea europaea HOM05D008040 ORTHO05D010075 3.2e-11 73.2 182 30.8
vmacro17323 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 4.1e-11 72.8 181 30.9
QL04p017640 Quercus lobata HOM05D008040 ORTHO05D010075 5.4e-11 72.4 173 28.3
Oeu009732.1 Olea europaea HOM05D001586 ORTHO05D001543 7.0e-11 72.0 183 30.1
QL04p017690 Quercus lobata HOM05D008040 ORTHO05D010075 1.6e-10 70.9 173 27.7
TWI77G0815 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 2.7e-10 70.1 158 36.1
vmacro17325 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 3.5e-10 69.7 181 30.9
AUR62008579 Chenopodium quinoa HOM05D008040 ORTHO05D010075 1.0e-09 68.2 187 29.4
AUR62035995 Chenopodium quinoa HOM05D008040 ORTHO05D010075 2.3e-09 67.0 172 33.1
EL10Ac2g04156 Beta vulgaris HOM05D008040 ORTHO05D010075 5.0e-09 65.9 172 32.6
AUR62017713 Chenopodium quinoa HOM05D008040 ORTHO05D010075 6.6e-09 65.5 172 33.1
COL.COLO4_12486 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.9e-08 63.9 159 29.6
Potri.008G016300 Populus trichocarpa HOM05D008040 ORTHO05D010075 5.6e-08 62.4 68 48.5
COL.COLO4_31564 Corchorus olitorius HOM05D008040 ORTHO05D010075 9.5e-08 61.6 182 30.8
COL.COLO4_31566 Corchorus olitorius HOM05D008040 ORTHO05D010075 9.5e-08 61.6 157 32.5
Manes.09G072126 Manihot esculenta HOM05D008040 ORTHO05D010075 1.6e-07 60.8 63 44.4
SGA_v2.0_scaffold286G47111 Striga asiatica HOM05D008040 ORTHO05D010075 2.1e-07 60.5 176 26.7
Potri.008G016150 Populus trichocarpa HOM05D008040 ORTHO05D010075 3.6e-07 59.7 65 47.7
Sabra08G0010400 Salix brachista HOM05D008040 ORTHO05D010075 1.1e-06 58.2 65 47.7
TWI12G0677 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 1.8e-06 57.4 202 26.7
TWI12G0410 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 2.3e-06 57.0 230 24.3
vmacro17324 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 5.2e-06 55.8 63 44.4


User provided reference genes

Program Settings