Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 6.0e-124 447.6 237 100.0
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 7.4e-114 414.1 237 91.6
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 2.1e-100 369.4 239 82.8
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 6.3e-89 331.3 237 76.8
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 3.1e-88 328.9 237 76.4
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 5.7e-74 281.6 239 64.4
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 1.3e-73 280.4 224 65.2
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 2.4e-72 276.2 249 59.8
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 1.2e-71 273.9 243 60.9
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 3.8e-70 268.9 246 59.3
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 1.5e-69 266.9 244 60.7
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 7.2e-69 264.6 236 61.4
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 1.6e-68 263.5 236 61.0
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 2.7e-68 262.7 257 59.9
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 1.0e-67 260.8 217 62.7
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 1.0e-67 260.8 245 60.0
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 1.0e-67 260.8 233 60.9
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 1.8e-67 260.0 240 62.9
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 1.8e-67 260.0 219 61.6
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 4.0e-67 258.8 228 60.5
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 5.2e-67 258.5 219 63.9
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 6.8e-67 258.1 246 61.0
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 8.8e-67 257.7 217 61.8
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 2.0e-66 256.5 220 60.9
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 2.6e-66 256.1 243 59.3
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 5.7e-66 255.0 232 61.6
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 5.7e-66 255.0 223 61.9
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 9.7e-66 254.2 235 61.3
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 9.7e-66 254.2 236 61.9
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 2.2e-65 253.1 226 59.7
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 1.8e-64 250.0 225 59.1
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 7.0e-64 248.1 223 59.2
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 1.2e-63 247.3 224 56.7
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 1.6e-63 246.9 222 57.7
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 2.0e-63 246.5 242 58.3
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 4.5e-63 245.4 218 58.7
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 7.7e-63 244.6 222 58.6
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 1.7e-62 243.4 237 61.2
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 3.8e-62 242.3 226 57.1
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 6.5e-62 241.5 228 57.0
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 8.5e-62 241.1 229 58.5
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 4.2e-61 238.8 222 56.8
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 2.1e-60 236.5 218 59.2
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 3.6e-60 235.7 242 55.8
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 8.0e-60 234.6 211 56.4
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 1.4e-59 233.8 228 56.6
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 1.8e-59 233.4 238 57.6
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 2.3e-59 233.0 210 62.9
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 2.3e-59 233.0 237 59.9
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 5.2e-59 231.9 235 54.5
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 8.8e-59 231.1 234 56.8
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 1.5e-58 230.3 235 53.6
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 1.5e-58 230.3 202 62.9
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 1.5e-58 230.3 230 55.7
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 1.3e-57 227.3 220 55.9
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 2.2e-57 226.5 191 61.8
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 3.7e-57 225.7 213 57.3
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 4.8e-57 225.3 206 56.8
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 6.3e-57 224.9 212 59.4
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 1.8e-56 223.4 198 59.6
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 2.4e-56 223.0 193 60.1
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 2.4e-56 223.0 238 53.4
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 3.1e-56 222.6 219 56.2
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 5.4e-56 221.9 237 55.3
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 9.1e-56 221.1 231 56.7
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 1.2e-55 220.7 190 58.9
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 1.6e-55 220.3 237 54.0
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 2.7e-55 219.5 234 52.6
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 3.5e-55 219.2 192 59.4
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 4.5e-55 218.8 202 56.4
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 5.9e-55 218.4 158 69.6
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 5.9e-55 218.4 232 54.3
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 1.0e-54 217.6 191 59.7
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 1.3e-54 217.2 235 51.5
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 2.9e-54 216.1 190 57.9
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 2.9e-54 216.1 191 59.2
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 2.9e-54 216.1 190 57.9
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 3.8e-54 215.7 163 65.6
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 5.0e-54 215.3 182 59.3
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 1.2e-52 210.7 190 56.8
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 1.4e-51 207.2 270 48.9
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 2.2e-49 199.9 193 57.0
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 7.8e-47 191.4 177 55.9
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 3.9e-46 189.1 222 49.5
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 1.6e-44 183.7 203 48.3
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 6.1e-44 181.8 235 44.7
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 6.8e-43 178.3 198 50.5
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 2.0e-42 176.8 124 66.1
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 5.8e-42 175.3 227 46.3
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 8.3e-41 171.4 194 54.6
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 1.0e-38 164.5 193 46.1
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 3.9e-38 162.5 184 53.3
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 1.9e-37 160.2 191 47.1
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 9.8e-34 147.9 89 82.0
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 1.7e-33 147.1 211 44.1
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 1.7e-33 147.1 169 43.8
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 6.6e-30 135.2 96 66.7
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 2.5e-29 133.3 188 43.1
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 4.7e-28 129.0 134 50.7
Duzib093G2110 Durio zibethinus HOM05D007221 ORTHO05D009204 6.2e-28 128.6 91 69.2
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 2.3e-27 126.7 97 68.0
CBR_g36819 Chara braunii HOM05D007221 ORTHO05D009204 2.5e-21 106.7 236 32.6
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 2.1e-20 103.6 109 52.3
SEGI_36647 Sequoiadendron giganteum HOM05D007221 ORTHO05D009204 5.2e-19 99.0 131 45.8
Aqoxy71s002 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 1.6e-12 77.4 54 68.5
SGA_v2.0_scaffold54G19517 Striga asiatica HOM05D007221 ORTHO05D009204 1.2e-07 61.2 95 43.2
Dinv39425 Davidia involucrata HOM05D002064 ORTHO05D002118 6.0e-07 58.9 48 58.3


User provided reference genes

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