Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD15G1017600 Malus domestica HOM05D008022 ORTHO05D010147 4.8e-73 278.5 238 100.0
CANSAT25G1466 Cannabis sativa HOM05D008022 ORTHO05D010147 4.6e-23 112.5 62 71.0
FvH4_2g39010 Fragaria vesca HOM05D008022 ORTHO05D010147 1.7e-22 110.5 235 68.9
Manes.05G152650 Manihot esculenta HOM05D008022 ORTHO05D010147 5.1e-22 109.0 65 70.8
Potri.005G234601 Populus trichocarpa HOM05D008022 ORTHO05D010147 5.1e-22 109.0 62 74.2
Eucgr.F01845 Eucalyptus grandis HOM05D008022 ORTHO05D010147 1.5e-21 107.5 62 75.8
Atru.chr13.362 Acer truncatum HOM05D008022 ORTHO05D010147 5.6e-21 105.5 53 81.1
CiPaw.07G154400 Carya illinoinensis HOM05D008022 ORTHO05D010147 5.6e-21 105.5 62 72.6
Gohir.A05G188500 Gossypium hirsutum HOM05D008022 ORTHO05D010147 5.6e-21 105.5 62 72.6
Gohir.D05G191600 Gossypium hirsutum HOM05D008022 ORTHO05D010147 5.6e-21 105.5 62 72.6
Lj1g0009874 Lotus japonicus HOM05D008022 ORTHO05D010147 5.6e-21 105.5 58 70.7
Lalb_Chr22g0354471 Lupinus albus HOM05D008022 ORTHO05D010147 5.6e-21 105.5 59 71.2
CsaV3_7G006070 Cucumis sativus L. HOM05D008022 ORTHO05D010147 1.3e-20 104.4 53 77.4
Cfa013902 Carpinus fangiana HOM05D002906 ORTHO05D003211 1.6e-20 104.0 62 71.0
CSS0048901 Camellia sinensis var. sinensis HOM05D008022 ORTHO05D010147 2.1e-20 103.6 61 67.2
CiPaw.08G062600 Carya illinoinensis HOM05D008022 ORTHO05D010147 2.1e-20 103.6 60 73.3
Nitab4.5_0000493g0010 Nicotiana tabacum HOM05D008022 ORTHO05D010147 2.1e-20 103.6 50 82.0
TWI12G0111 Tripterygium wilfordii HOM05D008022 ORTHO05D010147 2.8e-20 103.2 53 77.4
Gorai.009G196900 Gossypium raimondii HOM05D008022 ORTHO05D010147 3.6e-20 102.8 62 71.0
Lalb_Chr08g0246011 Lupinus albus HOM05D008022 ORTHO05D010147 4.8e-20 102.4 53 75.5
Sed0002960 Sechium edule HOM05D008022 ORTHO05D010147 1.1e-19 101.3 61 67.2
Medtr3g113080 Medicago truncatula HOM05D008022 ORTHO05D010147 1.4e-19 100.9 47 80.9
Psat6g005360 Pisum sativum HOM05D008022 ORTHO05D010147 1.4e-19 100.9 63 66.7
Medtr1g023270 Medicago truncatula HOM05D008022 ORTHO05D010147 4.0e-19 99.4 47 83.0
Glyma.14G216600 Glycine max HOM05D008022 ORTHO05D010147 2.0e-18 97.1 46 80.4
Phvul.001G009600 Phaseolus vulgaris HOM05D008022 ORTHO05D010147 5.8e-18 95.5 48 77.1
ECA236G3926 Erigeron canadensis HOM05D008022 ORTHO05D010147 7.6e-18 95.1 58 69.0
Lj5g0000972 Lotus japonicus HOM05D008022 ORTHO05D010147 7.6e-18 95.1 47 80.9
Glyma.17G255200 Glycine max HOM05D008022 ORTHO05D010147 1.3e-17 94.4 47 74.5
PGR031G0261 Punica granatum HOM05D008022 ORTHO05D010147 1.7e-17 94.0 46 78.3
Prupe.1G370900 Prunus persica HOM05D008022 ORTHO05D010147 2.2e-17 93.6 241 69.3
TPR.G40293 Trifolium pratense HOM05D008022 ORTHO05D010147 2.2e-17 93.6 56 69.6
VMungo1309G0619 Vigna mungo HOM05D002906 ORTHO05D003211 2.2e-17 93.6 63 57.1
Cc10_g02120 Coffea canephora HOM05D008022 ORTHO05D010147 4.9e-17 92.4 44 79.5
Duzib041G0305 Durio zibethinus HOM05D008022 ORTHO05D010147 4.9e-17 92.4 40 90.0
Cpa.g.sc140.17 Carica papaya HOM05D008022 ORTHO05D010147 8.4e-17 91.7 44 75.0
Lsat_1_v5_gn_7_91921 Lactuca sativa HOM05D008022 ORTHO05D010147 3.2e-16 89.7 65 60.0
arahy.Tifrunner.gnm1.ann1.QUSF5W Arachis hypogaea HOM05D008022 ORTHO05D010147 1.6e-15 87.4 48 68.8
Nn5g29204 Nelumbo nucifera HOM05D008022 ORTHO05D010147 1.6e-15 87.4 62 61.3
EL10Ac1g00558 Beta vulgaris HOM05D008022 ORTHO05D010147 2.7e-15 86.7 44 75.0
MELO3C018685.2 Cucumis melo HOM05D008022 ORTHO05D010147 2.7e-15 86.7 53 66.0
FAN27G1447 Fragaria x ananassa HOM05D008022 ORTHO05D010147 4.6e-15 85.9 53 67.9
arahy.Tifrunner.gnm1.ann1.RV6KDM Arachis hypogaea HOM05D008022 ORTHO05D010147 1.0e-14 84.7 48 62.5
arahy.Tifrunner.gnm1.ann1.0AGT2R Arachis hypogaea HOM05D008022 ORTHO05D010147 7.4e-13 78.6 45 62.2
PSO541G2481 Papaver somniferum HOM05D008022 ORTHO05D010147 9.6e-13 78.2 43 69.8
A02p20010 Brassica napus HOM05D008022 ORTHO05D010147 8.1e-12 75.1 45 62.2
C02p34060 Brassica napus HOM05D008022 ORTHO05D010147 8.1e-12 75.1 45 62.2
BolC2t09304H Brassica oleracea HOM05D008022 ORTHO05D010147 8.1e-12 75.1 45 62.2
BraA02t07039Z Brassica rapa HOM05D008022 ORTHO05D010147 8.1e-12 75.1 45 62.2
BraA07t31648Z Brassica rapa HOM05D008022 ORTHO05D010147 1.1e-11 74.7 53 56.6
AL2G35530 Arabidopsis lyrata HOM05D008022 ORTHO05D010147 1.8e-11 73.9 45 60.0
BcaC08g45567 Brassica carinata HOM05D008022 ORTHO05D010147 1.8e-11 73.9 45 62.2
BcaC08g47037 Brassica carinata HOM05D008022 ORTHO05D010147 1.8e-11 73.9 53 56.6
BcaC08g47337 Brassica carinata HOM05D008022 ORTHO05D010147 1.8e-11 73.9 53 56.6
BcaC08g47338 Brassica carinata HOM05D008022 ORTHO05D010147 1.8e-11 73.9 53 56.6
C06p32520 Brassica napus HOM05D008022 ORTHO05D010147 1.8e-11 73.9 45 62.2
BolC6t38374H Brassica oleracea HOM05D008022 ORTHO05D010147 1.8e-11 73.9 45 62.2
BcaB05g24920 Brassica carinata HOM05D008022 ORTHO05D010147 2.4e-11 73.6 45 62.2
Aqoxy6G02393 Aquilegia oxysepala HOM05D008022 ORTHO05D010147 5.3e-11 72.4 45 62.2
HPP92_017807 Vanilla planifolia HOM05D008022 ORTHO05D010147 5.3e-11 72.4 60 45.0
C06p49540 Brassica napus HOM05D008022 ORTHO05D010147 6.9e-11 72.0 53 54.7
BolC6t39993H Brassica oleracea HOM05D008022 ORTHO05D010147 6.9e-11 72.0 53 54.7
CARHR068950 Cardamine hirsuta HOM05D008022 ORTHO05D010147 6.9e-11 72.0 45 60.0
A07p41120 Brassica napus HOM05D008022 ORTHO05D010147 9.0e-11 71.6 53 54.7
BraA07t30517Z Brassica rapa HOM05D008022 ORTHO05D010147 2.6e-10 70.1 45 57.8
Carub.0002s2241 Capsella rubella HOM05D008022 ORTHO05D010147 4.5e-10 69.3 45 55.6
unitig_8.g4921 Utricularia gibba HOM05D008022 ORTHO05D010147 2.9e-09 66.6 54 51.9
CDE02G3345 Ceratophyllum demersum HOM05D008022 ORTHO05D010147 3.8e-09 66.2 42 54.8
DCAR_017590 Daucus carota HOM05D000043 ORTHO05D000223 3.8e-09 66.2 33 75.8
Phvul.009G014200 Phaseolus vulgaris HOM05D008022 ORTHO05D010147 4.2e-08 62.8 63 44.4
RcHm_v2.0_Chr6g0302111 Rosa chinensis HOM05D008022 ORTHO05D010147 2.1e-07 60.5 82 47.6


User provided reference genes

Program Settings