Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD15G1003000 Malus domestica HOM05D008020 ORTHO05D010140 5.7e-42 174.1 106 100.0
Oeu056212.1 Olea europaea HOM05D008020 ORTHO05D010140 2.5e-21 105.5 75 74.7
TWI56G1414 Tripterygium wilfordii HOM05D008020 ORTHO05D010140 1.2e-20 103.2 101 59.4
Haze_22756 Corylus avellana HOM05D008020 ORTHO05D010140 2.8e-20 102.1 73 72.6
Psat5g011800 Pisum sativum HOM05D008020 ORTHO05D010140 6.2e-20 100.9 74 66.2
Glyma.04G018700 Glycine max HOM05D008020 ORTHO05D010140 8.1e-20 100.5 101 58.4
Cfa014061 Carpinus fangiana HOM05D008020 ORTHO05D010140 1.4e-19 99.8 70 74.3
Glyma.06G019000 Glycine max HOM05D008020 ORTHO05D010140 1.4e-19 99.8 74 70.3
unitig_0.g2104 Utricularia gibba HOM05D008020 ORTHO05D010140 5.2e-19 97.8 75 72.0
SalBow7G2452 Salvia bowleyana HOM05D008020 ORTHO05D010140 1.5e-18 96.3 70 77.1
Rhsim06G0008300 Rhododendron simsii HOM05D008020 ORTHO05D010140 2.0e-18 95.9 73 71.2
Lsat_1_v5_gn_9_44980 Lactuca sativa HOM05D008020 ORTHO05D010140 2.6e-18 95.5 106 50.0
Medtr3g115170 Medicago truncatula HOM05D008020 ORTHO05D010140 2.6e-18 95.5 74 64.9
Eucgr.F03547 Eucalyptus grandis HOM05D008020 ORTHO05D010140 3.4e-18 95.1 72 69.4
Manes.05G135100 Manihot esculenta HOM05D008020 ORTHO05D010140 3.4e-18 95.1 101 56.4
Phvul.009G021900 Phaseolus vulgaris HOM05D008020 ORTHO05D010140 5.8e-18 94.4 74 67.6
HanXRQChr15g0492771 Helianthus annuus HOM05D008020 ORTHO05D010140 9.8e-18 93.6 78 61.5
COL.COLO4_00185 Corchorus olitorius HOM05D008020 ORTHO05D010140 1.3e-17 93.2 75 65.3
COL.COLO4_03997 Corchorus olitorius HOM05D008020 ORTHO05D010140 1.3e-17 93.2 75 65.3
ECA232G3495 Erigeron canadensis HOM05D008020 ORTHO05D010140 1.3e-17 93.2 109 52.3
Os03g0133100 Oryza sativa ssp. japonica HOM05D008020 ORTHO05D010140 1.3e-17 93.2 73 69.9
VMungo1309G2936 Vigna mungo HOM05D008020 ORTHO05D010140 2.2e-17 92.4 73 67.1
Actinidia29785 Actinidia chinensis HOM05D008020 ORTHO05D010140 2.9e-17 92.0 72 69.4
Migut.C00948 Erythranthe guttata HOM05D008020 ORTHO05D010140 2.9e-17 92.0 73 68.5
Migut.C00952 Erythranthe guttata HOM05D008020 ORTHO05D010140 2.9e-17 92.0 73 68.5
Lj1g0023017 Lotus japonicus HOM05D008020 ORTHO05D010140 3.7e-17 91.7 74 63.5
Nn6g31749 Nelumbo nucifera HOM05D008020 ORTHO05D010140 6.4e-17 90.9 72 69.4
RcHm_v2.0_Chr6g0304161 Rosa chinensis HOM05D008020 ORTHO05D010140 6.4e-17 90.9 106 55.7
Cpa.g.sc26.209 Carica papaya HOM05D008020 ORTHO05D010140 1.4e-16 89.7 75 64.0
TAR625G0930 Trochodendron aralioides HOM05D008020 ORTHO05D010140 1.4e-16 89.7 70 70.0
Gohir.A01G106700 Gossypium hirsutum HOM05D008020 ORTHO05D010140 5.4e-16 87.8 73 63.0
Gorai.002G118600 Gossypium raimondii HOM05D008020 ORTHO05D010140 5.4e-16 87.8 73 64.4
ClCG11G018630 Citrullus lanatus HOM05D008020 ORTHO05D010140 9.2e-16 87.0 73 67.1
Zm00001eb402590 Zea mays HOM05D008020 ORTHO05D010140 1.2e-15 86.7 75 66.7
arahy.Tifrunner.gnm1.ann1.IQ4KFY Arachis hypogaea HOM05D008020 ORTHO05D010140 1.6e-15 86.3 80 62.5
Gohir.D01G093200 Gossypium hirsutum HOM05D008020 ORTHO05D010140 1.6e-15 86.3 73 63.0
FvH4_2g37570 Fragaria vesca HOM05D008020 ORTHO05D010140 2.1e-15 85.9 115 52.2
Carub.0008s0691 Capsella rubella HOM05D008020 ORTHO05D010140 2.7e-15 85.5 79 55.7
CARHR284890 Cardamine hirsuta HOM05D008020 ORTHO05D010140 2.7e-15 85.5 87 54.0
FAN15G1770 Fragaria x ananassa HOM05D008020 ORTHO05D010140 2.7e-15 85.5 113 48.7
C03p28110 Brassica napus HOM05D008020 ORTHO05D010140 6.0e-15 84.3 88 50.0
Thecc.08G057500 Theobroma cacao HOM05D008020 ORTHO05D010140 7.8e-15 84.0 73 63.0
Ca_15441_v3 Cicer arietinum L. HOM05D008020 ORTHO05D010140 1.3e-14 83.2 75 64.0
Sc26g0004630 Simmondsia chinensis HOM05D008020 ORTHO05D010140 1.3e-14 83.2 73 60.3
Thhalv10009649m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 1.7e-14 82.8 88 50.0
AT5G42290 Arabidopsis thaliana HOM05D008020 ORTHO05D010140 2.3e-14 82.4 86 51.2
Sp7g08310 Schrenkiella parvula HOM05D008020 ORTHO05D010140 2.3e-14 82.4 88 53.4
EL10Ac1g01981 Beta vulgaris HOM05D008020 ORTHO05D010140 3.0e-14 82.0 73 64.4
BolC3t15181H Brassica oleracea HOM05D008020 ORTHO05D010140 5.1e-14 81.3 88 50.0
BcaC01g05309 Brassica carinata HOM05D008020 ORTHO05D010140 6.6e-14 80.9 88 48.9
Thhalv10028031m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 6.6e-14 80.9 88 48.9
CDE05G0785 Ceratophyllum demersum HOM05D008020 ORTHO05D010140 8.6e-14 80.5 73 63.0
Duzib041G0109 Durio zibethinus HOM05D008020 ORTHO05D010140 8.6e-14 80.5 73 61.6
PSO210G7351 Papaver somniferum HOM05D008020 ORTHO05D010140 8.6e-14 80.5 74 59.5
AL8G19330 Arabidopsis lyrata HOM05D008020 ORTHO05D010140 1.1e-13 80.1 86 53.5
MELO3C017014.2 Cucumis melo HOM05D008020 ORTHO05D010140 1.1e-13 80.1 104 51.0
BcaB01g03440 Brassica carinata HOM05D008020 ORTHO05D010140 1.5e-13 79.7 88 51.1
Lalb_Chr11g0061691 Lupinus albus HOM05D008020 ORTHO05D010140 2.5e-13 79.0 102 49.0
SEGI_30631 Sequoiadendron giganteum HOM05D008020 ORTHO05D010140 4.3e-13 78.2 74 59.5
ATR0106G002 Amborella trichopoda HOM05D008020 ORTHO05D010140 5.6e-13 77.8 77 59.7
CSS0004036 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 1.8e-11 72.8 72 59.7
Ah.00g000390 Amaranthus hybridus HOM05D008020 ORTHO05D010140 4.0e-11 71.6 73 56.2
CsaV3_4G037160 Cucumis sativus L. HOM05D008020 ORTHO05D010140 2.0e-10 69.3 70 60.0
AUR62036888 Chenopodium quinoa HOM05D008020 ORTHO05D010140 4.4e-10 68.2 70 58.6
AUR62043558 Chenopodium quinoa HOM05D008020 ORTHO05D010140 4.4e-10 68.2 70 58.6
AagrBONN_evm.TU.Sc2ySwM_368.1603 Anthoceros agrestis HOM05D008020 ORTHO05D010140 7.6e-10 67.4 75 52.0
Aa31LG9G12400 Aethionema arabicum HOM05D008020 ORTHO05D010140 8.4e-09 63.9 75 53.3
CSS0008844 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 8.4e-09 63.9 72 54.2
Prupe.1G355200 Prunus persica HOM05D008020 ORTHO05D010140 8.4e-09 63.9 90 50.0
Atru.chr13.153 Acer truncatum HOM05D008020 ORTHO05D010140 1.4e-08 63.2 61 55.7
QL02p013929 Quercus lobata HOM05D008020 ORTHO05D010140 3.0e-06 55.5 53 60.4
Ciclev10003459m.g Citrus clementina HOM05D008020 ORTHO05D010140 3.9e-06 55.1 73 47.9
Pp3c20_23510 Physcomitrium patens HOM05D008020 ORTHO05D010140 3.9e-06 55.1 72 44.4


User provided reference genes

Program Settings