Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 5.9e-242 840.5 439 100.0
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 3.2e-211 738.4 436 88.1
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 3.7e-196 688.3 437 81.2
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 5.4e-171 604.7 447 73.2
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 6.0e-170 601.3 439 73.1
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.0e-169 600.5 439 73.6
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 5.1e-169 598.2 437 73.7
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 5.6e-168 594.7 439 72.9
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 8.2e-159 564.3 444 68.9
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 5.8e-157 558.1 439 69.0
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 2.8e-151 539.3 444 65.5
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 3.1e-150 535.8 443 65.0
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 2.9e-148 529.3 444 63.5
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 8.5e-148 527.7 443 64.3
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 1.4e-147 526.9 437 64.5
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 9.4e-147 524.2 447 63.5
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 6.1e-146 521.5 439 64.2
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 3.9e-145 518.8 436 65.6
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 2.5e-144 516.2 424 66.7
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 1.8e-142 510.0 426 65.7
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 1.2e-141 507.3 434 62.9
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 7.7e-141 504.6 397 64.5
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 1.0e-140 504.2 407 65.4
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.7e-140 503.4 432 63.7
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 5.0e-140 501.9 407 66.8
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 9.4e-139 497.7 383 66.8
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 1.6e-138 496.9 437 62.0
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 2.7e-138 496.1 442 62.9
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 1.0e-137 494.2 421 62.2
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.4e-137 493.8 434 61.1
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 1.8e-137 493.4 436 64.4
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 1.8e-137 493.4 416 64.2
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 4.4e-136 488.8 403 63.5
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 5.7e-136 488.4 433 62.6
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 1.7e-135 486.9 434 61.1
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 1.7e-135 486.9 435 61.4
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 3.7e-135 485.7 437 60.6
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 1.1e-134 484.2 416 63.0
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 1.8e-134 483.4 403 66.3
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 2.7e-130 469.5 449 57.7
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 1.3e-127 460.7 413 61.7
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 2.2e-127 459.9 406 61.1
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 2.8e-127 459.5 407 62.4
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 1.4e-126 457.2 407 61.9
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.2e-125 454.1 433 57.7
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 1.6e-125 453.8 382 65.2
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 1.6e-125 453.8 405 61.2
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 7.7e-125 451.4 405 61.2
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 2.9e-124 449.5 405 61.2
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 3.8e-124 449.1 418 57.9
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 1.5e-123 447.2 348 66.1
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 4.2e-123 445.7 434 56.7
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 2.7e-122 443.0 412 58.5
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 1.8e-121 440.3 402 58.2
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 3.0e-121 439.5 420 58.1
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 2.2e-119 433.3 400 56.5
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 1.1e-118 431.0 402 61.2
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 1.4e-118 430.6 441 55.3
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 9.1e-118 427.9 427 53.6
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 2.5e-115 419.9 382 59.9
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 1.4e-113 414.1 316 69.9
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 7.5e-112 408.3 433 53.1
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 2.2e-111 406.8 406 52.0
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 4.8e-111 405.6 355 62.5
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 1.1e-110 404.4 345 64.6
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 5.9e-109 398.7 429 52.4
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 7.7e-109 398.3 405 53.3
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 1.7e-108 397.1 430 52.8
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 1.9e-107 393.7 424 50.9
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 3.3e-107 392.9 424 50.5
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 9.5e-107 391.3 431 52.0
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 1.6e-106 390.6 418 52.6
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 2.8e-106 389.8 425 51.3
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 2.8e-106 389.8 434 50.2
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 2.8e-106 389.8 434 50.2
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 1.0e-105 387.9 438 50.0
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 1.8e-105 387.1 430 51.2
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 3.5e-101 372.9 342 58.5
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 5.6e-91 339.0 427 47.1
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 5.6e-91 339.0 427 47.1
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.1e-89 334.7 295 57.3
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 7.5e-88 328.6 297 58.6
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 4.0e-81 306.2 262 63.7
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 6.8e-81 305.4 420 42.9
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 5.1e-76 289.3 385 43.4
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 1.1e-73 281.6 386 43.3
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 1.6e-69 267.7 372 39.2
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 6.0e-69 265.8 421 39.4
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 2.5e-67 260.4 310 49.0
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 3.3e-67 260.0 302 49.0
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.3e-66 258.1 259 56.4
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 1.1e-54 218.4 404 36.9
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 3.2e-54 216.9 390 38.7
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 2.7e-45 187.2 190 51.6
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 3.9e-44 183.3 593 26.3
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 8.7e-44 182.2 249 44.2
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 9.0e-41 172.2 116 73.3
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 8.7e-36 155.6 136 59.6
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 1.7e-31 141.4 130 58.5
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 3.7e-26 123.6 134 53.7
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 2.9e-23 114.0 110 60.9
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 1.4e-20 105.1 77 66.2
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 2.3e-20 104.4 80 68.8
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 2.2e-18 97.8 82 59.8
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 1.6e-16 91.7 84 58.3
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 4.5e-16 90.1 375 26.9
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 3.2e-14 84.0 254 30.3
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 3.6e-13 80.5 81 55.6
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 3.0e-12 77.4 54 70.4
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 4.4e-11 73.6 61 65.6
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 1.3e-10 72.0 37 91.9
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 3.1e-09 67.4 63 54.0


User provided reference genes

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