Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD14G1202700 Malus domestica HOM05D007067 ORTHO05D008864 2.1e-126 455.7 229 100.0
MD06G1195600 Malus domestica HOM05D007067 ORTHO05D008864 1.0e-96 357.1 189 95.8
Prupe.5G195500 Prunus persica HOM05D007067 ORTHO05D008864 6.7e-88 327.8 191 88.0
FAN18G1220 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.3e-83 313.5 192 84.9
RcHm_v2.0_Chr7g0181701 Rosa chinensis HOM05D007067 ORTHO05D008864 1.3e-83 313.5 192 85.4
FAN13G0188 Fragaria x ananassa HOM05D007067 ORTHO05D008864 2.5e-82 309.3 192 84.4
FAN08G0270 Fragaria x ananassa HOM05D007067 ORTHO05D008864 9.4e-82 307.4 192 83.9
GSVIVG01004672001 Vitis vinifera HOM05D007067 ORTHO05D008864 5.2e-72 275.0 183 77.6
GSVIVG01005334001 Vitis vinifera HOM05D007067 ORTHO05D008864 5.2e-72 275.0 183 77.6
Cfa018925 Carpinus fangiana HOM05D007067 ORTHO05D008864 2.0e-71 273.1 200 71.5
CSS0040643 Camellia sinensis var. sinensis HOM05D007067 ORTHO05D008864 1.3e-70 270.4 190 76.8
TAR622G0622 Trochodendron aralioides HOM05D007067 ORTHO05D008864 8.2e-70 267.7 191 74.3
Manes.06G091000 Manihot esculenta HOM05D007067 ORTHO05D008864 9.1e-69 264.2 183 73.8
QL10p017305 Quercus lobata HOM05D007067 ORTHO05D008864 9.1e-69 264.2 188 72.3
Cc04_g16320 Coffea canephora HOM05D007067 ORTHO05D008864 3.5e-68 262.3 189 72.0
CiPaw.11G046200 Carya illinoinensis HOM05D007067 ORTHO05D008864 1.0e-67 260.8 183 72.7
Nn3g17293 Nelumbo nucifera HOM05D007067 ORTHO05D008864 1.3e-67 260.4 189 71.4
MSTRG.9621 Avicennia marina HOM05D007067 ORTHO05D008864 6.5e-67 258.1 189 70.9
Potri.012G068500 Populus trichocarpa HOM05D007067 ORTHO05D008864 3.2e-66 255.8 183 74.3
Nitab4.5_0003381g0030 Nicotiana tabacum HOM05D007067 ORTHO05D008864 5.5e-66 255.0 189 72.5
Actinidia04879 Actinidia chinensis HOM05D007067 ORTHO05D008864 9.4e-66 254.2 183 68.9
TWI60G1483 Tripterygium wilfordii HOM05D007067 ORTHO05D008864 2.1e-65 253.1 187 72.7
DCAR_016569 Daucus carota HOM05D007067 ORTHO05D008864 2.3e-64 249.6 187 70.6
Rhsim08G0153200 Rhododendron simsii HOM05D007067 ORTHO05D008864 5.2e-64 248.4 189 68.8
Nitab4.5_0005226g0040 Nicotiana tabacum HOM05D007067 ORTHO05D008864 6.8e-64 248.1 189 70.4
SalBow3G2729 Salvia bowleyana HOM05D007067 ORTHO05D008864 1.5e-63 246.9 189 70.4
Ca_27682_v3 Cicer arietinum L. HOM05D007067 ORTHO05D008864 2.0e-63 246.5 189 67.7
MBI02_g12272_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 2.6e-63 246.1 211 61.6
MELO3C017182.2 Cucumis melo HOM05D007067 ORTHO05D008864 5.7e-63 245.0 185 70.3
Sabra12G0047100 Salix brachista HOM05D007067 ORTHO05D008864 7.5e-63 244.6 183 71.6
ClCG06G016120 Citrullus lanatus HOM05D007067 ORTHO05D008864 1.7e-62 243.4 183 69.4
CAN.G846.12 Capsicum annuum HOM05D007067 ORTHO05D008864 2.2e-62 243.0 189 68.3
Phvul.009G186200 Phaseolus vulgaris HOM05D007067 ORTHO05D008864 2.2e-62 243.0 189 68.3
CsaV3_1G002440 Cucumis sativus L. HOM05D007067 ORTHO05D008864 2.8e-62 242.7 185 69.7
Aqoxy3G00483 Aquilegia oxysepala HOM05D007067 ORTHO05D008864 3.7e-62 242.3 189 67.2
CANSAT56G4102 Cannabis sativa HOM05D007067 ORTHO05D008864 3.7e-62 242.3 185 69.2
Gorai.003G097800 Gossypium raimondii HOM05D007067 ORTHO05D008864 2.4e-61 239.6 184 69.6
Gohir.D03G093800 Gossypium hirsutum HOM05D007067 ORTHO05D008864 3.1e-61 239.2 184 69.6
Lj1g0007284 Lotus japonicus HOM05D007067 ORTHO05D008864 4.1e-61 238.8 189 67.2
Lalb_Chr08g0235641 Lupinus albus HOM05D007067 ORTHO05D008864 4.1e-61 238.8 194 65.5
Dinv38731 Davidia involucrata HOM05D007067 ORTHO05D008864 5.3e-61 238.4 189 68.8
Gohir.A03G067300 Gossypium hirsutum HOM05D007067 ORTHO05D008864 1.2e-60 237.3 184 69.0
vmacro17532 Vaccinium macrocarpon HOM05D007067 ORTHO05D008864 1.2e-60 237.3 187 65.2
Glyma.04G167400 Glycine max HOM05D007067 ORTHO05D008864 1.6e-60 236.9 183 67.2
Glyma.06G195200 Glycine max HOM05D007067 ORTHO05D008864 2.0e-60 236.5 183 66.7
Duzib205G1209 Durio zibethinus HOM05D007067 ORTHO05D008864 4.5e-60 235.3 189 68.8
TPR.G11876 Trifolium pratense HOM05D007067 ORTHO05D008864 5.9e-60 235.0 190 67.4
Thecc.03G091100 Theobroma cacao HOM05D007067 ORTHO05D008864 7.7e-60 234.6 187 68.4
Psat5g201280 Pisum sativum HOM05D007067 ORTHO05D008864 1.7e-59 233.4 192 66.7
PGSC0003DMG400021933 Solanum tuberosum HOM05D007067 ORTHO05D008864 1.7e-59 233.4 184 68.5
EL10Ac5g11044 Beta vulgaris HOM05D007067 ORTHO05D008864 2.2e-59 233.0 190 66.3
Sed0012968 Sechium edule HOM05D007067 ORTHO05D008864 5.0e-59 231.9 183 67.8
Eucgr.K02487 Eucalyptus grandis HOM05D007067 ORTHO05D008864 1.1e-58 230.7 183 66.1
arahy.Tifrunner.gnm1.ann1.V8ZK3N Arachis hypogaea HOM05D007067 ORTHO05D008864 1.5e-58 230.3 189 67.7
Migut.D01803 Erythranthe guttata HOM05D007067 ORTHO05D008864 1.5e-58 230.3 187 67.4
Medtr3g435320 Medicago truncatula HOM05D007067 ORTHO05D008864 1.5e-58 230.3 190 67.4
arahy.Tifrunner.gnm1.ann1.JMB3VF Arachis hypogaea HOM05D007067 ORTHO05D008864 1.9e-58 229.9 189 67.7
Hma1.2p1_0637F.1_g193620 Hydrangea macrophylla HOM05D007067 ORTHO05D008864 1.9e-58 229.9 129 85.3
Cpa.g.sc111.20 Carica papaya HOM05D007067 ORTHO05D008864 5.5e-58 228.4 183 67.2
Peaxi162Scf00106g00326 Petunia axillaris HOM05D007067 ORTHO05D008864 5.5e-58 228.4 177 69.5
Solyc12g036170.2 Solanum lycopersicum HOM05D007067 ORTHO05D008864 1.6e-57 226.9 169 71.0
HanXRQChr05g0156061 Helianthus annuus HOM05D007067 ORTHO05D008864 2.1e-57 226.5 190 66.3
Sopen12g016290 Solanum pennellii HOM05D007067 ORTHO05D008864 2.7e-57 226.1 184 66.3
PSO063G5395 Papaver somniferum HOM05D007067 ORTHO05D008864 6.1e-57 224.9 189 65.1
Atru.chr9.195 Acer truncatum HOM05D007067 ORTHO05D008864 8.0e-57 224.6 184 67.4
PSO832G0421 Papaver somniferum HOM05D007067 ORTHO05D008864 1.0e-56 224.2 190 64.7
CDE02G3919 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 1.2e-55 220.7 189 62.4
AUR62008437 Chenopodium quinoa HOM05D007067 ORTHO05D008864 1.5e-55 220.3 127 82.7
Lj5A109T72 Lonicera japonica HOM05D007067 ORTHO05D008864 1.4e-53 213.8 153 72.5
ECA246G0430 Erigeron canadensis HOM05D007067 ORTHO05D008864 5.4e-53 211.8 189 65.6
Lsat_1_v5_gn_5_20880 Lactuca sativa HOM05D007067 ORTHO05D008864 1.6e-52 210.3 155 72.3
unitig_0.g778 Utricularia gibba HOM05D007067 ORTHO05D008864 3.5e-52 209.1 193 62.2
THA.LOC104808257 Tarenaya hassleriana HOM05D007067 ORTHO05D008864 5.9e-52 208.4 187 58.3
BcaB07g31890 Brassica carinata HOM05D007067 ORTHO05D008864 1.0e-51 207.6 188 61.7
MBI02_g23462_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 1.3e-51 207.2 211 54.0
Eucgr.K02485 Eucalyptus grandis HOM05D007067 ORTHO05D008864 3.8e-51 205.7 178 61.8
A06p14840 Brassica napus HOM05D007067 ORTHO05D008864 5.0e-51 205.3 184 62.0
BraA06t24606Z Brassica rapa HOM05D007067 ORTHO05D008864 5.0e-51 205.3 184 62.0
C05p17040 Brassica napus HOM05D007067 ORTHO05D008864 6.6e-51 204.9 189 60.3
C08p43060 Brassica napus HOM05D007067 ORTHO05D008864 6.6e-51 204.9 232 52.6
BolC5t30410H Brassica oleracea HOM05D007067 ORTHO05D008864 6.6e-51 204.9 189 60.3
CDE09G1053 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 8.6e-51 204.5 121 78.5
Sp1g16740 Schrenkiella parvula HOM05D007067 ORTHO05D008864 8.6e-51 204.5 184 60.9
BcaC05g25773 Brassica carinata HOM05D007067 ORTHO05D008864 1.5e-50 203.8 189 60.3
FvH4_5g14690 Fragaria vesca HOM05D007067 ORTHO05D008864 1.9e-50 203.4 124 82.3
PGR044G1431 Punica granatum HOM05D007067 ORTHO05D008864 9.5e-50 201.1 113 84.1
AL1G31200 Arabidopsis lyrata HOM05D007067 ORTHO05D008864 1.2e-49 200.7 184 60.3
ATR0564G121 Amborella trichopoda HOM05D007067 ORTHO05D008864 1.6e-49 200.3 195 57.9
BcaB03g14481 Brassica carinata HOM05D007067 ORTHO05D008864 1.6e-49 200.3 166 65.7
Carub.0001s1838 Capsella rubella HOM05D007067 ORTHO05D008864 2.8e-49 199.5 184 60.3
Peaxi162Scf00106g00037 Petunia axillaris HOM05D007067 ORTHO05D008864 1.0e-48 197.6 117 83.8
AT1G18730 Arabidopsis thaliana HOM05D007067 ORTHO05D008864 1.4e-48 197.2 184 58.7
Thhalv10008902m.g Eutrema salsugineum HOM05D007067 ORTHO05D008864 2.3e-48 196.4 184 60.9
A09p59720 Brassica napus HOM05D007067 ORTHO05D008864 3.0e-48 196.1 178 60.7
BraA09t41348Z Brassica rapa HOM05D007067 ORTHO05D008864 3.0e-48 196.1 178 60.7
CARHR019370 Cardamine hirsuta HOM05D007067 ORTHO05D008864 4.0e-48 195.7 184 59.8
BolC8t51861H Brassica oleracea HOM05D007067 ORTHO05D008864 1.3e-46 190.7 184 59.2
Aa31LG7G3520 Aethionema arabicum HOM05D007067 ORTHO05D008864 1.2e-44 184.1 115 73.9
AUR62021654 Chenopodium quinoa HOM05D007067 ORTHO05D008864 5.6e-42 175.3 150 62.0
COL.COLO4_28333 Corchorus olitorius HOM05D007067 ORTHO05D008864 2.1e-41 173.3 186 54.8
Zm00001eb254450 Zea mays HOM05D007067 ORTHO05D008864 4.0e-40 169.1 138 61.6
Os02g0744000 Oryza sativa ssp. japonica HOM05D007067 ORTHO05D008864 3.7e-38 162.5 138 60.9
BcaC07g41296 Brassica carinata HOM05D007067 ORTHO05D008864 3.6e-33 146.0 97 68.0
Rhsim08G0153500 Rhododendron simsii HOM05D007067 ORTHO05D008864 5.8e-31 138.7 182 48.9
Ciclev10022880m.g Citrus clementina HOM05D007067 ORTHO05D008864 7.5e-31 138.3 117 61.5
SEGI_39094 Sequoiadendron giganteum HOM05D007067 ORTHO05D008864 4.6e-28 129.0 133 54.1
Manes.06G090801 Manihot esculenta HOM05D007067 ORTHO05D008864 2.7e-20 103.2 98 60.2
Haze_07309 Corylus avellana HOM05D007067 ORTHO05D008864 6.0e-20 102.1 189 42.9
CBR_g30507 Chara braunii HOM05D007067 ORTHO05D008864 3.9e-19 99.4 103 51.5
Mapoly0149s0008 Marchantia polymorpha HOM05D007067 ORTHO05D008864 8.6e-19 98.2 102 46.1
Pp3c16_3930 Physcomitrium patens HOM05D007067 ORTHO05D008864 1.5e-18 97.4 94 52.1
Ah.11g048310 Amaranthus hybridus HOM05D007067 ORTHO05D008864 3.9e-11 72.8 40 82.5
COL.COLO4_28352 Corchorus olitorius HOM05D004600 ORTHO05D005471 4.0e-08 62.8 52 71.2
Rhsim08G0168600 Rhododendron simsii HOM05D000306 ORTHO05D023263 3.4e-07 59.7 42 78.6


User provided reference genes

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