Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD14G1201800 Malus domestica HOM05D004915 ORTHO05D006048 5.5e-147 524.2 259 100.0
MD06G1194800 Malus domestica HOM05D004915 ORTHO05D006048 1.2e-136 490.0 259 92.7
Prupe.5G195000 Prunus persica HOM05D004915 ORTHO05D006048 3.7e-127 458.4 258 86.8
RcHm_v2.0_Chr7g0181591 Rosa chinensis HOM05D004915 ORTHO05D006048 1.6e-114 416.4 257 78.6
QL10p017218 Quercus lobata HOM05D004915 ORTHO05D006048 6.8e-113 411.0 258 75.6
FAN10G0297 Fragaria x ananassa HOM05D004915 ORTHO05D006048 3.4e-112 408.7 259 77.2
FAN03G1016 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.3e-111 406.8 259 77.2
FvH4_7g07490 Fragaria vesca HOM05D004915 ORTHO05D006048 8.3e-111 404.1 259 76.4
FAN18G3490 Fragaria x ananassa HOM05D004915 ORTHO05D006048 5.4e-110 401.4 254 75.6
FAN04G1144 Fragaria x ananassa HOM05D004915 ORTHO05D006048 9.2e-110 400.6 254 75.6
FAN08G1694 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.6e-109 399.8 254 75.2
Thecc.03G090400 Theobroma cacao HOM05D004915 ORTHO05D006048 1.6e-109 399.8 243 77.4
FvH4_5g14790 Fragaria vesca HOM05D004915 ORTHO05D006048 6.0e-109 397.9 254 75.2
Cfa018930 Carpinus fangiana HOM05D004915 ORTHO05D006048 7.8e-109 397.5 257 73.9
FAN13G2234 Fragaria x ananassa HOM05D004915 ORTHO05D006048 3.9e-108 395.2 254 74.4
GSVIVG01007990001 Vitis vinifera HOM05D004915 ORTHO05D006048 3.6e-106 388.7 256 71.9
TAR622G0868 Trochodendron aralioides HOM05D004915 ORTHO05D006048 4.7e-106 388.3 247 72.9
Lj5C110T19 Lonicera japonica HOM05D004915 ORTHO05D006048 1.1e-105 387.1 251 73.7
CiPaw.11G045800 Carya illinoinensis HOM05D004915 ORTHO05D006048 5.2e-105 384.8 259 72.2
Oeu058311.1 Olea europaea HOM05D004915 ORTHO05D006048 1.2e-104 383.6 259 71.4
Duzib205G1074 Durio zibethinus HOM05D004915 ORTHO05D006048 2.0e-104 382.9 242 74.8
Haze_07314 Corylus avellana HOM05D004915 ORTHO05D006048 7.5e-104 380.9 292 65.4
CAN.G199.5 Capsicum annuum HOM05D004915 ORTHO05D006048 3.7e-103 378.6 256 68.8
Eucgr.B00520 Eucalyptus grandis HOM05D004915 ORTHO05D006048 4.9e-103 378.3 242 74.4
Oeu037787.1 Olea europaea HOM05D004915 ORTHO05D006048 4.9e-103 378.3 271 69.4
ECA246G2050 Erigeron canadensis HOM05D004915 ORTHO05D006048 6.4e-103 377.9 242 73.1
COL.COLO4_22946 Corchorus olitorius HOM05D004915 ORTHO05D006048 1.6e-101 373.2 262 70.2
Solyc06g065310.3 Solanum lycopersicum HOM05D004915 ORTHO05D006048 4.6e-101 371.7 256 67.6
Migut.L00264 Erythranthe guttata HOM05D004915 ORTHO05D006048 7.8e-101 370.9 256 68.4
Sopen06g023800 Solanum pennellii HOM05D004915 ORTHO05D006048 1.0e-100 370.5 256 68.4
Dinv37673 Davidia involucrata HOM05D004915 ORTHO05D006048 1.3e-100 370.2 243 72.0
Rhsim08G0070400 Rhododendron simsii HOM05D004915 ORTHO05D006048 1.3e-100 370.2 254 69.7
CsaV3_1G005570 Cucumis sativus L. HOM05D004915 ORTHO05D006048 1.7e-100 369.8 247 70.4
ClCG04G012190 Citrullus lanatus HOM05D004915 ORTHO05D006048 3.0e-100 369.0 247 70.0
MELO3C001989.2 Cucumis melo HOM05D004915 ORTHO05D006048 3.0e-100 369.0 247 70.0
Hma1.2p1_0060F.1_g033670 Hydrangea macrophylla HOM05D004915 ORTHO05D006048 5.1e-100 368.2 243 72.0
PGSC0003DMG400026111 Solanum tuberosum HOM05D004915 ORTHO05D006048 5.1e-100 368.2 249 68.7
TWI34G1631 Tripterygium wilfordii HOM05D004915 ORTHO05D006048 6.6e-100 367.9 241 71.8
CANSAT56G1541 Cannabis sativa HOM05D004915 ORTHO05D006048 8.6e-100 367.5 235 70.6
MSTRG.15680 Avicennia marina HOM05D004915 ORTHO05D006048 1.5e-99 366.7 241 70.5
PSO478G3309 Papaver somniferum HOM05D004915 ORTHO05D006048 1.5e-99 366.7 258 67.8
Peaxi162Scf00241g00416 Petunia axillaris HOM05D004915 ORTHO05D006048 1.9e-99 366.3 246 69.5
Atru.chr8.192 Acer truncatum HOM05D004915 ORTHO05D006048 2.5e-99 365.9 243 71.2
SGA_v2.0_scaffold17G08101 Striga asiatica HOM05D004915 ORTHO05D006048 3.3e-99 365.5 260 67.7
Nitab4.5_0000121g0120 Nicotiana tabacum HOM05D004915 ORTHO05D006048 9.5e-99 364.0 248 68.5
HanXRQChr08g0236601 Helianthus annuus HOM05D004915 ORTHO05D006048 2.8e-98 362.5 241 70.1
Ciclev10012474m.g Citrus clementina HOM05D004915 ORTHO05D006048 3.6e-98 362.1 241 70.1
Hund02640 Selenicereus undatus HOM05D004915 ORTHO05D006048 6.2e-98 361.3 258 65.1
HanXRQChr09g0247201 Helianthus annuus HOM05D004915 ORTHO05D006048 8.1e-98 360.9 242 68.6
Aqoxy3G03429 Aquilegia oxysepala HOM05D004915 ORTHO05D006048 1.4e-97 360.1 250 66.4
TPR.G33578 Trifolium pratense HOM05D004915 ORTHO05D006048 2.4e-97 359.4 242 67.8
Cc04_g16470 Coffea canephora HOM05D004915 ORTHO05D006048 3.1e-97 359.0 242 70.2
VMungo1383G0755 Vigna mungo HOM05D004915 ORTHO05D006048 5.2e-97 358.2 246 65.9
CSS0019190 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 8.9e-97 357.5 241 68.9
Potri.017G085100 Populus trichocarpa HOM05D004915 ORTHO05D006048 8.9e-97 357.5 243 68.7
Manes.01G092400 Manihot esculenta HOM05D004915 ORTHO05D006048 1.2e-96 357.1 243 67.1
Phvul.008G037200 Phaseolus vulgaris HOM05D004915 ORTHO05D006048 1.5e-96 356.7 240 67.5
Sabra17G0075000 Salix brachista HOM05D004915 ORTHO05D006048 1.5e-96 356.7 243 69.1
Lj1g0024391 Lotus japonicus HOM05D004915 ORTHO05D006048 2.6e-96 355.9 246 65.4
Glyma.09G236600 Glycine max HOM05D004915 ORTHO05D006048 3.4e-96 355.5 246 66.3
Lalb_Chr23g0265041 Lupinus albus HOM05D004915 ORTHO05D006048 4.4e-96 355.1 241 67.2
AL5G18870 Arabidopsis lyrata HOM05D004915 ORTHO05D006048 5.8e-96 354.8 247 67.2
arahy.Tifrunner.gnm1.ann1.BYQL86 Arachis hypogaea HOM05D004915 ORTHO05D006048 9.9e-96 354.0 246 65.9
Cpa.g.sc179.53 Carica papaya HOM05D004915 ORTHO05D006048 9.9e-96 354.0 244 66.8
MBI05_g33757_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 9.9e-96 354.0 240 70.0
AUR62021031 Chenopodium quinoa HOM05D004915 ORTHO05D006048 1.3e-95 353.6 256 64.5
Ca_02901_v3 Cicer arietinum L. HOM05D004915 ORTHO05D006048 1.7e-95 353.2 242 67.4
TPR.G39201 Trifolium pratense HOM05D004915 ORTHO05D006048 2.2e-95 352.8 242 66.9
BolC7t44312H Brassica oleracea HOM05D004915 ORTHO05D006048 4.9e-95 351.7 248 66.5
Lsat_1_v5_gn_9_27040 Lactuca sativa HOM05D004915 ORTHO05D006048 4.9e-95 351.7 242 68.6
Nn4g23203 Nelumbo nucifera HOM05D004915 ORTHO05D006048 4.9e-95 351.7 240 67.9
BraA06t26934Z Brassica rapa HOM05D004915 ORTHO05D006048 8.4e-95 350.9 248 66.5
BcaC06g33662 Brassica carinata HOM05D004915 ORTHO05D006048 1.1e-94 350.5 248 66.5
C07p37910 Brassica napus HOM05D004915 ORTHO05D006048 1.1e-94 350.5 248 66.5
AUR62018412 Chenopodium quinoa HOM05D004915 ORTHO05D006048 1.1e-94 350.5 256 64.1
Sp2g17640 Schrenkiella parvula HOM05D004915 ORTHO05D006048 1.1e-94 350.5 247 66.4
Thhalv10027886m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 3.2e-94 349.0 249 65.9
Peaxi162Scf00106g00016 Petunia axillaris HOM05D004915 ORTHO05D006048 3.2e-94 349.0 285 59.3
Actinidia38781 Actinidia chinensis HOM05D004915 ORTHO05D006048 5.4e-94 348.2 250 64.8
CARHR152100 Cardamine hirsuta HOM05D004915 ORTHO05D006048 5.4e-94 348.2 243 65.8
Medtr1g111380 Medicago truncatula HOM05D004915 ORTHO05D006048 5.4e-94 348.2 242 64.0
TAR374G0666 Trochodendron aralioides HOM05D004915 ORTHO05D006048 7.1e-94 347.8 216 73.1
Medtr7g011040 Medicago truncatula HOM05D004915 ORTHO05D006048 9.2e-94 347.4 242 64.9
Carub.0005s0760 Capsella rubella HOM05D004915 ORTHO05D006048 1.2e-93 347.1 243 66.7
Sp7g02320 Schrenkiella parvula HOM05D004915 ORTHO05D006048 1.6e-93 346.7 249 65.5
A06p40200 Brassica napus HOM05D004915 ORTHO05D006048 4.6e-93 345.1 248 64.9
Lj4A111T68 Lonicera japonica HOM05D004915 ORTHO05D006048 4.6e-93 345.1 261 63.6
Aa31LG2G4180 Aethionema arabicum HOM05D004915 ORTHO05D006048 7.8e-93 344.4 243 66.3
MBI05_g35466_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 7.8e-93 344.4 254 66.1
Thhalv10005292m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 1.3e-92 343.6 247 64.4
DCAR_015957 Daucus carota HOM05D004915 ORTHO05D006048 1.7e-92 343.2 242 68.2
Psat3g200280 Pisum sativum HOM05D004915 ORTHO05D006048 1.7e-92 343.2 246 64.2
BolC4t26193H Brassica oleracea HOM05D004915 ORTHO05D006048 2.3e-92 342.8 249 64.3
Aa31LG9G16420 Aethionema arabicum HOM05D004915 ORTHO05D006048 8.7e-92 340.9 250 63.6
C04p46080 Brassica napus HOM05D004915 ORTHO05D006048 1.9e-91 339.7 249 63.5
BraA04t16903Z Brassica rapa HOM05D004915 ORTHO05D006048 1.9e-91 339.7 249 64.3
Actinidia38763 Actinidia chinensis HOM05D004915 ORTHO05D006048 4.3e-91 338.6 260 61.9
Carub.0007s3626 Capsella rubella HOM05D004915 ORTHO05D006048 5.6e-91 338.2 247 64.4
CARHR262560 Cardamine hirsuta HOM05D004915 ORTHO05D006048 1.2e-90 337.0 240 65.8
A04p12400 Brassica napus HOM05D004915 ORTHO05D006048 4.7e-90 335.1 249 63.9
PGR083G1377 Punica granatum HOM05D004915 ORTHO05D006048 1.8e-89 333.2 231 69.7
EL10Ac3g07299 Beta vulgaris HOM05D004915 ORTHO05D006048 9.0e-89 330.9 288 56.2
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 4.9e-87 325.1 248 62.1
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 4.9e-87 325.1 248 62.1
Zm00001eb211140 Zea mays HOM05D004915 ORTHO05D006048 6.4e-87 324.7 250 62.4
CSS0012692 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 4.2e-86 322.0 241 63.9
Os08g0435800 Oryza sativa ssp. japonica HOM05D004915 ORTHO05D006048 1.6e-85 320.1 244 60.7
PGR031G1409 Punica granatum HOM05D004915 ORTHO05D006048 6.0e-85 318.2 206 73.8
Gorai.001G074400 Gossypium raimondii HOM05D004915 ORTHO05D006048 4.3e-83 312.0 200 72.5
Gohir.D07G070500 Gossypium hirsutum HOM05D004915 ORTHO05D006048 2.1e-82 309.7 200 71.5
Sc04g0002730 Simmondsia chinensis HOM05D004915 ORTHO05D006048 2.6e-80 302.8 169 81.7
THA.LOC104825807 Tarenaya hassleriana HOM05D004915 ORTHO05D006048 3.4e-80 302.4 272 54.8
SEGI_18610 Sequoiadendron giganteum HOM05D004915 ORTHO05D006048 3.8e-79 298.9 213 64.3
Sed0011950 Sechium edule HOM05D004915 ORTHO05D006048 1.1e-78 297.4 175 78.3
AT3G29010 Arabidopsis thaliana HOM05D004915 ORTHO05D006048 2.1e-77 293.1 176 75.6
Mapoly0106s0015 Marchantia polymorpha HOM05D004915 ORTHO05D006048 6.2e-74 281.6 240 54.6
BcaB06g27359 Brassica carinata HOM05D004915 ORTHO05D006048 1.1e-73 280.8 240 59.6
Pp3c2_33530 Physcomitrium patens HOM05D004915 ORTHO05D006048 5.3e-73 278.5 243 54.7
AagrBONN_evm.TU.Sc2ySwM_344.3958 Anthoceros agrestis HOM05D004915 ORTHO05D006048 3.8e-71 272.3 228 55.7
Actinidia26226 Actinidia chinensis HOM05D004915 ORTHO05D006048 9.3e-70 267.7 241 54.8
CSS0012742 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 1.3e-66 257.3 241 52.7
AagrBONN_evm.TU.Sc2ySwM_362.689 Anthoceros agrestis HOM05D004915 ORTHO05D006048 1.2e-64 250.8 235 51.5
ATR0626G227 Amborella trichopoda HOM05D004915 ORTHO05D006048 2.6e-64 249.6 193 61.1
SMO119G0486 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 7.6e-64 248.1 235 51.9
AagrBONN_evm.TU.Sc2ySwM_362.690 Anthoceros agrestis HOM05D004915 ORTHO05D006048 6.0e-61 238.4 166 63.3
QL06p014871 Quercus lobata HOM05D004915 ORTHO05D006048 1.6e-58 230.3 129 79.8
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 1.0e-55 221.1 248 48.0
MCO14G534 Micromonas commoda HOM05D004915 ORTHO05D006048 8.5e-55 218.0 210 49.5
Cre01.g053750 Chlamydomonas reinhardtii HOM05D004915 ORTHO05D006048 2.3e-52 209.9 187 52.4
Gohir.A07G066000 Gossypium hirsutum HOM05D004915 ORTHO05D006048 9.7e-51 204.5 139 67.6
HanXRQChr14g0437411 Helianthus annuus HOM05D004915 ORTHO05D006048 1.3e-50 204.1 126 73.8
HanXRQChr13g0408591 Helianthus annuus HOM05D004915 ORTHO05D006048 4.1e-49 199.1 126 72.2
unitig_60.g25520 Utricularia gibba HOM05D004915 ORTHO05D006048 1.0e-47 194.5 250 46.4
SMO164G0178 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 1.6e-45 187.2 212 44.8
CBR_g58409 Chara braunii HOM05D004915 ORTHO05D006048 2.3e-44 183.3 211 45.5
vmacro05688 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 2.6e-43 179.9 138 60.9
Nitab4.5_0004528g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 4.4e-43 179.1 283 39.2
PRCOL_00000090 Prasinoderma coloniale HOM05D004915 ORTHO05D006048 4.1e-41 172.6 297 34.3
DCAR_026059 Daucus carota HOM05D004915 ORTHO05D006048 9.1e-41 171.4 115 66.1
Nitab4.5_0005170g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 1.2e-40 171.0 105 73.3
vmacro18186 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 1.2e-40 171.0 194 48.5
FAN06G0706 Fragaria x ananassa HOM05D004915 ORTHO05D006048 2.3e-36 156.8 118 68.6
Ah.04g150570 Amaranthus hybridus HOM05D004915 ORTHO05D006048 3.7e-26 122.9 79 69.6
QL06p014899 Quercus lobata HOM05D004915 ORTHO05D006048 2.2e-23 113.6 65 73.8
Nitab4.5_0005170g0060 Nicotiana tabacum HOM05D004915 ORTHO05D006048 2.7e-21 106.7 98 51.0
ATR0642G001 Amborella trichopoda HOM05D004915 ORTHO05D006048 5.5e-14 82.4 47 78.7
DCAR_015961 Daucus carota HOM05D004915 ORTHO05D006048 4.7e-13 79.3 69 52.2
Pp3s30_306 Physcomitrium patens HOM05D004915 ORTHO05D043763 3.9e-07 59.7 128 28.9
Ah.04g150580 Amaranthus hybridus HOM05D004915 ORTHO05D006048 1.5e-06 57.8 53 54.7
Pp3c1_38790 Physcomitrium patens HOM05D004915 ORTHO05D315101 5.6e-06 55.8 40 62.5


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