Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD14G1159700 Malus domestica HOM05D006849 ORTHO05D003348 3.5e-97 358.2 175 100.0
MD07G1084700 Malus domestica HOM05D006849 ORTHO05D003348 1.0e-43 180.6 180 52.8
MD13G1161500 Malus domestica HOM05D007856 ORTHO05D003348 4.6e-28 128.6 137 48.9
MD14G1125700 Malus domestica HOM05D006849 ORTHO05D003348 4.6e-28 128.6 81 69.1
MD08G1229500 Malus domestica HOM05D006849 ORTHO05D003348 1.9e-26 123.2 79 68.4
RcHm_v2.0_Chr2g0150581 Rosa chinensis HOM05D007856 ORTHO05D003348 3.0e-19 99.4 188 30.9
RcHm_v2.0_Chr2g0149141 Rosa chinensis HOM05D006849 ORTHO05D003348 6.6e-19 98.2 183 31.7
MD07G1020000 Malus domestica HOM05D006849 ORTHO05D003348 3.3e-18 95.9 51 76.5
RcHm_v2.0_Chr5g0066571 Rosa chinensis HOM05D006849 ORTHO05D003348 3.6e-17 92.4 158 31.0
RcHm_v2.0_Chr1g0371171 Rosa chinensis HOM05D006849 ORTHO05D003348 1.4e-16 90.5 167 32.9
MD11G1203900 Malus domestica HOM05D007856 ORTHO05D003348 6.8e-16 88.2 71 59.2
RcHm_v2.0_Chr2g0141711 Rosa chinensis HOM05D006849 ORTHO05D003348 6.8e-16 88.2 162 30.2
MD05G1093200 Malus domestica HOM05D007856 ORTHO05D003348 4.4e-15 85.5 71 60.6
MD05G1167800 Malus domestica HOM05D006849 ORTHO05D003348 4.4e-15 85.5 133 40.6
RcHm_v2.0_Chr3g0491361 Rosa chinensis HOM05D006849 ORTHO05D003348 7.6e-15 84.7 158 31.0
RcHm_v2.0_Chr5g0010461 Rosa chinensis HOM05D006849 ORTHO05D003348 4.1e-13 79.0 168 28.0
Potri.019G061550 Populus trichocarpa HOM05D006849 ORTHO05D003348 9.2e-13 77.8 176 27.3
FvH4_6g08820 Fragaria vesca HOM05D007856 ORTHO05D003348 1.2e-12 77.4 175 30.9
FAN26G2587 Fragaria x ananassa HOM05D007856 ORTHO05D003348 1.7e-11 73.6 175 30.3
TWI36G0416 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 1.1e-10 70.9 172 27.9
FAN20G3088 Fragaria x ananassa HOM05D007856 ORTHO05D003348 2.5e-10 69.7 164 26.8
MD02G1253200 Malus domestica HOM05D037583 ORTHO05D003348 2.5e-10 69.7 116 40.5
MD02G1254000 Malus domestica HOM05D037583 ORTHO05D003348 2.5e-10 69.7 116 40.5
FAN08G0186 Fragaria x ananassa HOM05D006849 ORTHO05D003348 5.6e-10 68.6 108 35.2
FAN21G2011 Fragaria x ananassa HOM05D006849 ORTHO05D003348 7.3e-10 68.2 174 27.0
FAN06G0436 Fragaria x ananassa HOM05D006849 ORTHO05D003348 9.6e-10 67.8 151 27.2
FAN02G2385 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.2e-09 67.4 150 27.3
FvH4_1g07041 Fragaria vesca HOM05D007856 ORTHO05D003348 1.6e-09 67.0 175 25.7
FAN26G0218 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.6e-09 67.0 124 34.7
Potri.001G165480 Populus trichocarpa HOM05D018388 ORTHO05D003348 1.6e-09 67.0 166 26.5
FvH4_5g21501 Fragaria vesca HOM05D006849 ORTHO05D003348 2.8e-09 66.2 171 25.7
MD17G1262000 Malus domestica HOM05D006849 ORTHO05D003348 2.8e-09 66.2 56 48.2
FAN14G2538 Fragaria x ananassa HOM05D006849 ORTHO05D003348 4.7e-09 65.5 174 26.4
FvH4_2g06412 Fragaria vesca HOM05D006849 ORTHO05D003348 1.1e-08 64.3 162 25.3
TWI32G0226 Tripterygium wilfordii HOM05D002907 ORTHO05D003348 1.4e-08 63.9 169 26.6
FvH4_2g08146 Fragaria vesca HOM05D007856 ORTHO05D003348 1.8e-08 63.5 175 28.0
FvH4_3g02850 Fragaria vesca HOM05D000096 ORTHO05D000045 5.2e-08 62.0 177 24.9
FAN01G0657 Fragaria x ananassa HOM05D007856 ORTHO05D003348 5.2e-08 62.0 177 24.9
FAN01G3000 Fragaria x ananassa HOM05D007856 ORTHO05D003348 5.2e-08 62.0 177 24.9
FAN23G2888 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.4e-07 59.3 161 26.1
FAN24G0953 Fragaria x ananassa HOM05D007856 ORTHO05D003348 4.4e-07 58.9 175 26.9
MD04G1002000 Malus domestica HOM05D029265 ORTHO05D003348 5.8e-07 58.5 47 53.2
FAN16G1806 Fragaria x ananassa HOM05D006849 ORTHO05D003348 7.6e-07 58.2 161 26.1
MD17G1252600 Malus domestica HOM05D006849 ORTHO05D003348 7.6e-07 58.2 120 31.7
FvH4_5g19920 Fragaria vesca HOM05D006849 ORTHO05D003348 1.3e-06 57.4 161 28.0
FAN23G1437 Fragaria x ananassa HOM05D000005 ORTHO05D003348 1.3e-06 57.4 191 24.1
TWI53G0769 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.3e-06 57.4 172 26.7
TWI60G0328 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 1.3e-06 57.4 172 26.7
TWI63G1000 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 2.2e-06 56.6 172 26.2
Potri.001G320601 Populus trichocarpa HOM05D018388 ORTHO05D003348 3.8e-06 55.8 171 25.1
FvH4_5g29621 Fragaria vesca HOM05D006849 ORTHO05D003348 4.9e-06 55.5 149 27.5
FAN21G0042 Fragaria x ananassa HOM05D007856 ORTHO05D003348 4.9e-06 55.5 154 26.6
TWI73G0686 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 4.9e-06 55.5 172 26.2
TWI63G1232 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 8.4e-06 54.7 173 24.9
Zm00001eb105600 Zea mays HOM05D008312 ORTHO05D010433 8.4e-06 54.7 190 24.2


User provided reference genes

Program Settings