Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD14G1146800 Malus domestica HOM05D002266 ORTHO05D010337 3.3e-201 704.9 380 100.0
Prupe.5G140800 Prunus persica HOM05D002266 ORTHO05D010337 2.5e-132 476.1 379 71.2
RcHm_v2.0_Chr7g0188601 Rosa chinensis HOM05D002266 ORTHO05D010337 7.7e-105 384.8 365 61.9
FvH4_5g09640 Fragaria vesca HOM05D002266 ORTHO05D010337 2.1e-102 376.7 370 61.1
FAN18G2616 Fragaria x ananassa HOM05D002266 ORTHO05D010337 2.6e-100 369.8 369 60.7
FAN04G1258 Fragaria x ananassa HOM05D002266 ORTHO05D010337 6.3e-99 365.2 368 59.8
FAN13G2170 Fragaria x ananassa HOM05D002266 ORTHO05D010337 8.8e-93 344.7 369 57.7
FAN08G1259 Fragaria x ananassa HOM05D002266 ORTHO05D010337 1.8e-74 283.9 369 51.8
Duzib205G1981 Durio zibethinus HOM05D002266 ORTHO05D010337 1.6e-70 270.8 380 45.0
Lj5C86T8 Lonicera japonica HOM05D002266 ORTHO05D010337 2.1e-70 270.4 379 44.9
Hma1.2p1_0452F.1_g155980 Hydrangea macrophylla HOM05D002266 ORTHO05D010337 1.4e-69 267.7 373 43.7
Atru.chr6.1922 Acer truncatum HOM05D002266 ORTHO05D010337 8.3e-67 258.5 381 42.8
Atru.chr6.1924 Acer truncatum HOM05D002266 ORTHO05D010337 8.3e-67 258.5 381 42.8
Ciclev10033782m.g Citrus clementina HOM05D002266 ORTHO05D010337 4.1e-66 256.1 376 43.6
QL10p000420 Quercus lobata HOM05D002266 ORTHO05D010337 2.9e-64 250.0 374 44.7
Gohir.D07G050900 Gossypium hirsutum HOM05D002266 ORTHO05D010337 1.6e-62 244.2 380 41.8
TWI23G1291 Tripterygium wilfordii HOM05D002266 ORTHO05D010337 1.6e-62 244.2 375 42.1
Gohir.A07G046600 Gossypium hirsutum HOM05D002266 ORTHO05D010337 2.1e-62 243.8 380 41.8
Gorai.001G054000 Gossypium raimondii HOM05D002266 ORTHO05D010337 6.1e-62 242.3 380 41.6
AL8G38630 Arabidopsis lyrata HOM05D002266 ORTHO05D010337 2.6e-60 236.9 357 41.2
AT5G61865 Arabidopsis thaliana HOM05D002266 ORTHO05D010337 2.6e-60 236.9 358 42.2
Migut.D01181 Erythranthe guttata HOM05D002266 ORTHO05D010337 2.6e-60 236.9 371 42.3
Thecc.03G141000 Theobroma cacao HOM05D002266 ORTHO05D010337 1.3e-59 234.6 378 41.8
Sabra12G0079800 Salix brachista HOM05D002266 ORTHO05D010337 3.7e-59 233.0 383 40.5
Carub.0008s2256 Capsella rubella HOM05D002266 ORTHO05D010337 6.4e-59 232.3 362 40.1
Manes.14G044300 Manihot esculenta HOM05D002266 ORTHO05D010337 8.3e-59 231.9 379 40.6
Potri.012G108900 Populus trichocarpa HOM05D002266 ORTHO05D010337 2.4e-58 230.3 371 40.4
Rhsim08G0198000 Rhododendron simsii HOM05D002266 ORTHO05D010337 2.4e-58 230.3 411 38.0
Thhalv10005642m.g Eutrema salsugineum HOM05D002266 ORTHO05D010337 4.1e-58 229.6 364 41.2
CARHR275630 Cardamine hirsuta HOM05D002266 ORTHO05D010337 1.2e-57 228.0 357 40.1
Sp2g25060 Schrenkiella parvula HOM05D002266 ORTHO05D010337 1.6e-57 227.6 365 41.9
A06p28540 Brassica napus HOM05D002266 ORTHO05D010337 4.3e-55 219.5 365 42.7
BcaC01g02442 Brassica carinata HOM05D002266 ORTHO05D010337 5.6e-55 219.2 366 42.9
C03p65250 Brassica napus HOM05D002266 ORTHO05D010337 5.6e-55 219.2 366 42.9
BolC3t18778H Brassica oleracea HOM05D002266 ORTHO05D010337 5.6e-55 219.2 366 42.9
BraA06t25800Z Brassica rapa HOM05D002266 ORTHO05D010337 1.6e-54 217.6 364 42.6
DCAR_025647 Daucus carota HOM05D002266 ORTHO05D010337 2.8e-54 216.9 381 38.1
Aa31LG11G1630 Aethionema arabicum HOM05D002266 ORTHO05D010337 6.8e-53 212.2 354 39.3
BcaB02g09608 Brassica carinata HOM05D002266 ORTHO05D010337 8.9e-53 211.8 364 41.5
Cc04_g05840 Coffea canephora HOM05D002266 ORTHO05D010337 4.4e-52 209.5 383 38.4
SGA_v2.0_scaffold74G24650 Striga asiatica HOM05D002266 ORTHO05D010337 4.4e-52 209.5 371 39.4
HanXRQChr05g0155381 Helianthus annuus HOM05D002266 ORTHO05D010337 1.3e-51 208.0 369 39.3
Oeu013660.2 Olea europaea HOM05D002266 ORTHO05D010337 1.3e-51 208.0 353 39.9
Aqoxy3G02681 Aquilegia oxysepala HOM05D002266 ORTHO05D010337 4.6e-49 199.5 386 36.5
THA.LOC104818284 Tarenaya hassleriana HOM05D002266 ORTHO05D010337 2.1e-46 190.7 389 34.7
SalBow1G8312 Salvia bowleyana HOM05D002266 ORTHO05D010337 2.3e-45 187.2 377 36.1
PSO339G3582 Papaver somniferum HOM05D002266 ORTHO05D010337 4.0e-45 186.4 422 34.8
Lsat_1_v5_gn_5_10020 Lactuca sativa HOM05D002266 ORTHO05D010337 2.6e-44 183.7 373 35.4
COL.COLO4_37262 Corchorus olitorius HOM05D002266 ORTHO05D010337 1.9e-42 177.6 272 42.6
Nitab4.5_0008403g0020 Nicotiana tabacum HOM05D002266 ORTHO05D010337 9.2e-42 175.3 361 34.9
Peaxi162Scf00135g01413 Petunia axillaris HOM05D002266 ORTHO05D010337 4.6e-41 172.9 360 34.7
Sopen12g021270 Solanum pennellii HOM05D002266 ORTHO05D010337 3.9e-40 169.9 307 36.5
Solyc12g042340.2 Solanum lycopersicum HOM05D002266 ORTHO05D010337 5.1e-40 169.5 364 33.5
MBI07_g35979_MAGBIO Magnolia biondii HOM05D002266 ORTHO05D010337 1.5e-39 167.9 294 37.8
Nitab4.5_0002584g0010 Nicotiana tabacum HOM05D002266 ORTHO05D010337 1.5e-39 167.9 366 34.2
Dinv13716 Davidia involucrata HOM05D002266 ORTHO05D010337 2.5e-39 167.2 203 44.8
Cpa.g.sc13.178 Carica papaya HOM05D002266 ORTHO05D010337 2.4e-37 160.6 207 48.3
Actinidia25516 Actinidia chinensis HOM05D002266 ORTHO05D010337 5.2e-37 159.5 256 40.6
unitig_747.g21318 Utricularia gibba HOM05D002266 ORTHO05D010337 1.3e-35 154.8 360 33.6
PGSC0003DMG400014448 Solanum tuberosum HOM05D002266 ORTHO05D010337 1.7e-24 117.9 315 29.8
SEGI_02612 Sequoiadendron giganteum HOM05D002266 ORTHO05D000002 2.5e-10 70.9 283 25.8
Cpa.g.sc13.177 Carica papaya HOM05D002266 ORTHO05D010337 1.0e-08 65.5 189 32.8
AagrBONN_evm.TU.Sc2ySwM_228.1887 Anthoceros agrestis HOM05D002266 ORTHO05D010337 2.5e-07 60.8 254 27.6


User provided reference genes

Program Settings