Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD14G1143100 Malus domestica HOM05D000087 ORTHO05D005735 0.0e+00 1192.9 593 100.0
MD06G1127500 Malus domestica HOM05D000087 ORTHO05D005735 5.2e-249 864.4 583 79.6
Prupe.5G137300 Prunus persica HOM05D000087 ORTHO05D005735 7.5e-240 833.9 584 76.0
RcHm_v2.0_Chr7g0188131 Rosa chinensis HOM05D000087 ORTHO05D005735 9.2e-214 747.3 584 70.9
FAN04G3195 Fragaria x ananassa HOM05D000087 ORTHO05D005735 2.3e-209 732.6 584 69.3
FvH4_5g10170 Fragaria vesca HOM05D000087 ORTHO05D005735 1.5e-208 729.9 584 69.2
FAN18G4270 Fragaria x ananassa HOM05D000087 ORTHO05D005735 2.0e-208 729.6 584 69.0
FAN08G3226 Fragaria x ananassa HOM05D000087 ORTHO05D005735 7.5e-208 727.6 582 68.9
CiPaw.11G106200 Carya illinoinensis HOM05D000087 ORTHO05D005735 9.6e-179 630.9 587 60.1
GSVIVG01019707001 Vitis vinifera HOM05D000087 ORTHO05D005735 7.1e-174 614.8 575 60.3
TWI81G0850 Tripterygium wilfordii HOM05D000087 ORTHO05D005735 8.1e-170 601.3 588 56.8
Duzib068G0232 Durio zibethinus HOM05D000087 ORTHO05D005735 1.8e-169 600.1 586 56.7
QL02p026653 Quercus lobata HOM05D000087 ORTHO05D005735 1.5e-168 597.0 521 63.3
Ciclev10018581m.g Citrus clementina HOM05D000087 ORTHO05D005735 1.7e-167 593.6 582 56.9
Cfa011874 Carpinus fangiana HOM05D000087 ORTHO05D005735 2.9e-167 592.8 523 62.5
CANSAT64G2851 Cannabis sativa HOM05D000087 ORTHO05D005735 1.4e-166 590.5 587 56.7
Thecc.03G213700 Theobroma cacao HOM05D000087 ORTHO05D005735 6.7e-164 581.6 576 56.6
TAR629G0355 Trochodendron aralioides HOM05D000087 ORTHO05D005735 5.6e-163 578.6 601 55.6
Gohir.A08G107500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 3.7e-162 575.9 586 55.3
Gorai.004G127300 Gossypium raimondii HOM05D000087 ORTHO05D005735 1.1e-161 574.3 586 55.6
Dinv11465 Davidia involucrata HOM05D000087 ORTHO05D005735 6.9e-161 571.6 592 55.2
Manes.17G015000 Manihot esculenta HOM05D000087 ORTHO05D005735 7.6e-160 568.2 579 55.1
Lj2C147G10 Lonicera japonica HOM05D000087 ORTHO05D005735 2.2e-159 566.6 586 57.0
CsaV3_5G001350 Cucumis sativus L. HOM05D000087 ORTHO05D005735 7.1e-158 561.6 591 54.7
Atru.chr9.2610 Acer truncatum HOM05D000087 ORTHO05D005735 9.3e-158 561.2 506 60.9
Sabra16G0307100 Salix brachista HOM05D000087 ORTHO05D005735 5.1e-156 555.4 550 57.5
MELO3C005812.2 Cucumis melo HOM05D000087 ORTHO05D005735 2.4e-153 546.6 632 51.9
Actinidia22240 Actinidia chinensis HOM05D000087 ORTHO05D005735 1.2e-152 544.3 556 55.9
ClCG01G001230 Citrullus lanatus HOM05D000087 ORTHO05D005735 4.5e-152 542.3 647 50.9
Sed0004639 Sechium edule HOM05D000087 ORTHO05D005735 3.8e-151 539.3 591 53.3
Gohir.D08G120500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 1.1e-150 537.7 584 52.9
Lalb_Chr14g0362591 Lupinus albus HOM05D000087 ORTHO05D005735 3.9e-148 529.3 586 52.6
Eucgr.D02539 Eucalyptus grandis HOM05D000087 ORTHO05D005735 1.9e-147 526.9 583 53.3
Lj6g0001276 Lotus japonicus HOM05D000087 ORTHO05D005735 5.7e-147 525.4 593 51.9
Glyma.06G180700 Glycine max HOM05D000087 ORTHO05D005735 4.8e-146 522.3 584 52.4
MSTRG.22476 Avicennia marina HOM05D000087 ORTHO05D005735 2.2e-143 513.5 587 50.4
Migut.H02249 Erythranthe guttata HOM05D000087 ORTHO05D005735 1.4e-142 510.8 589 49.6
Phvul.011G167550 Phaseolus vulgaris HOM05D000087 ORTHO05D005735 1.4e-142 510.8 586 50.7
PSO063G0654 Papaver somniferum HOM05D000087 ORTHO05D005735 1.6e-141 507.3 600 49.8
Psat5g111000 Pisum sativum HOM05D000087 ORTHO05D005735 2.1e-141 506.9 586 50.5
PSO782G2195 Papaver somniferum HOM05D000087 ORTHO05D005735 4.7e-141 505.8 599 50.1
Sopen07g004380 Solanum pennellii HOM05D000087 ORTHO05D005735 7.9e-141 505.0 584 51.2
Peaxi162Scf00046g00228 Petunia axillaris HOM05D000087 ORTHO05D005735 2.3e-140 503.4 579 51.8
Haze_09232 Corylus avellana HOM05D000087 ORTHO05D005735 8.8e-140 501.5 532 56.0
Solyc07g008450.3 Solanum lycopersicum HOM05D000087 ORTHO05D005735 2.6e-139 500.0 583 51.1
Nitab4.5_0000491g0190 Nicotiana tabacum HOM05D000087 ORTHO05D005735 3.3e-139 499.6 548 52.4
VMungo1127G0184 Vigna mungo HOM05D000087 ORTHO05D005735 9.7e-139 498.0 570 50.7
vmacro08519 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 5.9e-136 488.8 702 45.0
CAN.G1548.2 Capsicum annuum HOM05D000087 ORTHO05D005735 8.5e-135 485.0 580 49.5
Nn3g18737 Nelumbo nucifera HOM05D000087 ORTHO05D005735 1.1e-134 484.6 611 46.5
MBI04_g04806_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 1.6e-133 480.7 596 48.7
Nitab4.5_0007502g0010 Nicotiana tabacum HOM05D000087 ORTHO05D005735 2.7e-133 479.9 554 52.0
EL10Ac2g03880 Beta vulgaris HOM05D000087 ORTHO05D005735 3.6e-133 479.6 580 49.0
HanXRQChr01g0016041 Helianthus annuus HOM05D000087 ORTHO05D005735 8.0e-133 478.4 605 48.6
Carub.0007s0001 Capsella rubella HOM05D000087 ORTHO05D005735 1.8e-132 477.2 551 49.4
AL7G10010 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 2.3e-132 476.9 551 49.7
AT4G38120 Arabidopsis thaliana HOM05D000087 ORTHO05D005735 2.3e-132 476.9 551 49.0
Sp7g37630 Schrenkiella parvula HOM05D000087 ORTHO05D005735 1.1e-131 474.6 553 49.9
C01p21480 Brassica napus HOM05D000087 ORTHO05D005735 2.0e-131 473.8 554 48.9
BolC1t02068H Brassica oleracea HOM05D000087 ORTHO05D005735 2.0e-131 473.8 554 48.9
AUR62009145 Chenopodium quinoa HOM05D000087 ORTHO05D005735 2.8e-130 469.9 578 49.1
Cc08_g17160 Coffea canephora HOM05D000087 ORTHO05D005735 2.8e-130 469.9 585 48.7
ECA246G1365 Erigeron canadensis HOM05D000087 ORTHO05D005735 8.2e-130 468.4 583 47.7
Rhsim02G0255700 Rhododendron simsii HOM05D000087 ORTHO05D005735 1.4e-129 467.6 498 54.6
A01p17150 Brassica napus HOM05D000087 ORTHO05D005735 7.0e-129 465.3 552 47.6
AUR62039113 Chenopodium quinoa HOM05D000087 ORTHO05D005735 7.0e-129 465.3 576 48.4
Sc01g0010950 Simmondsia chinensis HOM05D000087 ORTHO05D005735 9.1e-129 464.9 577 49.2
BraA01t01671Z Brassica rapa HOM05D000087 ORTHO05D005735 4.5e-128 462.6 552 47.3
THA.LOC104806594 Tarenaya hassleriana HOM05D000087 ORTHO05D005735 8.0e-125 451.8 574 47.7
Lsat_1_v5_gn_3_13301 Lactuca sativa HOM05D000087 ORTHO05D005735 3.0e-124 449.9 530 48.5
Medtr3g080640 Medicago truncatula HOM05D000087 ORTHO05D005735 5.2e-124 449.1 490 52.7
arahy.Tifrunner.gnm1.ann1.0XGN9Z Arachis hypogaea HOM05D000087 ORTHO05D005735 1.1e-121 441.4 483 53.6
PGR031G2531 Punica granatum HOM05D000087 ORTHO05D005735 2.7e-120 436.8 548 48.4
SGA_v2.0_scaffold123G33449 Striga asiatica HOM05D000087 ORTHO05D005735 1.0e-119 434.9 712 39.7
ATR0579G142 Amborella trichopoda HOM05D000087 ORTHO05D005735 5.7e-115 419.1 604 42.1
HPP92_008913 Vanilla planifolia HOM05D000087 ORTHO05D005735 2.4e-113 413.7 599 42.7
Hund03336 Selenicereus undatus HOM05D000087 ORTHO05D005735 5.4e-113 412.5 576 44.6
CARHR143600 Cardamine hirsuta HOM05D000087 ORTHO05D005735 3.8e-111 406.4 472 50.6
Zm00001eb416210 Zea mays HOM05D000087 ORTHO05D005735 3.1e-105 386.7 577 42.6
Aa31LG6G16960 Aethionema arabicum HOM05D000087 ORTHO05D005735 2.0e-104 384.0 526 45.8
Os08g0152900 Oryza sativa ssp. japonica HOM05D000087 ORTHO05D005735 1.7e-103 380.9 583 41.5
DCAR_010123 Daucus carota HOM05D000087 ORTHO05D005735 7.0e-97 359.0 441 49.2
Thhalv10024269m.g Eutrema salsugineum HOM05D000087 ORTHO05D005735 7.0e-97 359.0 546 42.5
Mapoly0043s0141 Marchantia polymorpha HOM05D000087 ORTHO05D005735 4.9e-90 336.3 531 39.7
FAN18G0494 Fragaria x ananassa HOM05D000087 ORTHO05D005735 4.3e-86 323.2 366 54.9
arahy.Tifrunner.gnm1.ann1.DH86LW Arachis hypogaea HOM05D000087 ORTHO05D005735 4.1e-81 306.6 593 37.3
Potri.001G454200 Populus trichocarpa HOM05D000087 ORTHO05D005735 6.6e-79 299.3 227 65.6
SMO367G1062 Selaginella moellendorffii HOM05D000087 ORTHO05D005735 2.8e-77 293.9 562 36.8
Pp3c3_37190 Physcomitrium patens HOM05D000087 ORTHO05D005735 2.0e-75 287.7 545 34.5
Aqoxy5G04397 Aquilegia oxysepala HOM05D000087 ORTHO05D005735 5.4e-73 279.6 236 61.0
SEGI_15816 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 7.6e-67 259.2 366 47.5
CDE02G0276 Ceratophyllum demersum HOM05D000087 ORTHO05D005735 9.9e-67 258.8 336 46.7
COL.COLO4_10863 Corchorus olitorius HOM05D000087 ORTHO05D005735 1.2e-64 251.9 530 35.1
CBR_g3175 Chara braunii HOM05D000087 ORTHO05D005735 2.3e-55 221.1 623 29.7
Duzib084G0823 Durio zibethinus HOM05D000087 ORTHO05D005735 2.1e-48 198.0 170 62.4
FAN13G3301 Fragaria x ananassa HOM05D000087 ORTHO05D005735 1.8e-47 194.9 134 75.4
Cpa.g.sc363.3 Carica papaya HOM05D000087 ORTHO05D005735 5.3e-44 183.3 172 57.6
HPP92_028198 Vanilla planifolia HOM05D000087 ORTHO05D005735 9.3e-41 172.6 227 44.9
CSS0034403 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 5.7e-38 163.3 201 50.2
CSS0007327 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 2.4e-36 157.9 211 46.4
CARHR293880 Cardamine hirsuta HOM05D000087 ORTHO05D005735 7.2e-33 146.4 123 60.2
MCO07G377 Micromonas commoda HOM05D000087 ORTHO05D005735 3.1e-28 131.0 381 27.0
HPP92_028197 Vanilla planifolia HOM05D000087 ORTHO05D005735 3.1e-28 131.0 171 46.2
Oeu053260.1 Olea europaea HOM05D000087 ORTHO05D010194 5.7e-22 110.2 121 52.1
CARHR291390 Cardamine hirsuta HOM05D000087 ORTHO05D005735 7.7e-19 99.8 65 70.8
CSS0050207 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 1.3e-18 99.0 91 63.7
Rhsim02G0255800 Rhododendron simsii HOM05D000087 ORTHO05D005735 5.5e-17 93.6 100 53.0
Hma1.2p1_0198F.1_g085360 Hydrangea macrophylla HOM05D000087 ORTHO05D005735 1.6e-16 92.0 90 54.4
CARHR293870 Cardamine hirsuta HOM05D000087 ORTHO05D005735 2.0e-14 85.1 90 52.2
SEGI_26704 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 2.0e-14 85.1 139 35.3
Medtr3g080660 Medicago truncatula HOM05D000087 ORTHO05D005735 3.5e-11 74.3 102 46.1
Cre03.g166600 Chlamydomonas reinhardtii HOM05D000087 ORTHO05D005735 4.2e-09 67.4 189 26.5
CARHR293860 Cardamine hirsuta HOM05D000087 ORTHO05D005735 1.2e-08 65.9 77 44.2
AUR62009162 Chenopodium quinoa HOM05D000087 ORTHO05D005735 5.7e-06 57.0 77 39.0
SEGI_26992 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 7.5e-06 56.6 88 39.8


User provided reference genes

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