Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD14G1141800 Malus domestica HOM05D007277 ORTHO05D006336 4.9e-73 277.7 140 100.0
MD12G1151700 Malus domestica HOM05D007277 ORTHO05D006336 3.9e-62 241.5 140 88.6
MD03G1009100 Malus domestica HOM05D007277 ORTHO05D006336 6.2e-60 234.2 160 76.2
MD03G1009500 Malus domestica HOM05D007277 ORTHO05D006336 1.4e-48 196.4 120 81.7
MD12G1151900 Malus domestica HOM05D007277 ORTHO05D006336 2.5e-45 185.7 98 95.9
Prupe.1G109400 Prunus persica HOM05D007277 ORTHO05D006336 2.8e-44 182.2 116 71.6
Prupe.6G011800 Prunus persica HOM05D007277 ORTHO05D006336 9.9e-42 173.7 116 69.8
Prupe.6G011200 Prunus persica HOM05D007277 ORTHO05D006336 5.1e-38 161.4 113 67.3
MD03G1010100 Malus domestica HOM05D007277 ORTHO05D006336 8.7e-38 160.6 140 62.1
MD03G1011400 Malus domestica HOM05D007277 ORTHO05D006336 9.6e-29 130.6 118 53.4
MD11G1013900 Malus domestica HOM05D007277 ORTHO05D006336 3.1e-27 125.6 123 52.8
Prupe.6G011700 Prunus persica HOM05D007277 ORTHO05D006336 4.0e-27 125.2 117 56.4
MD11G1013400 Malus domestica HOM05D007277 ORTHO05D006336 2.2e-25 119.4 120 51.7
FAN13G2869 Fragaria x ananassa HOM05D007277 ORTHO05D006336 8.7e-22 107.5 114 51.8
FvH4_5g13140 Fragaria vesca HOM05D007277 ORTHO05D006336 9.6e-21 104.0 114 50.9
FAN18G3246 Fragaria x ananassa HOM05D007277 ORTHO05D006336 9.6e-21 104.0 114 50.9
FvH4_5g13170 Fragaria vesca HOM05D007277 ORTHO05D006336 1.6e-20 103.2 114 50.0
FvH4_5g13230 Fragaria vesca HOM05D007277 ORTHO05D006336 3.7e-20 102.1 114 50.9
FAN18G2501 Fragaria x ananassa HOM05D007277 ORTHO05D006336 4.8e-20 101.7 114 50.0
FvH4_5g13130 Fragaria vesca HOM05D007277 ORTHO05D006336 8.1e-20 100.9 114 48.2
FAN18G0686 Fragaria x ananassa HOM05D007277 ORTHO05D006336 8.1e-20 100.9 114 48.2
FAN08G1790 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.8e-19 99.8 114 49.1
FAN18G2870 Fragaria x ananassa HOM05D000423 ORTHO05D000284 7.6e-18 94.4 107 49.5
QL07p042995 Quercus lobata HOM05D007277 ORTHO05D006336 1.3e-17 93.6 113 46.0
FAN08G1781 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.9e-16 89.7 112 42.9
FvH4_5g13221 Fragaria vesca HOM05D007277 ORTHO05D006336 5.5e-16 88.2 116 44.8
Haze_24863 Corylus avellana HOM05D000010 ORTHO05D006336 1.6e-15 86.7 113 41.6
QL07p042903 Quercus lobata HOM05D007277 ORTHO05D006336 3.5e-15 85.5 112 48.2
Haze_24862 Corylus avellana HOM05D007277 ORTHO05D006336 4.6e-15 85.1 113 42.5
FAN08G3205 Fragaria x ananassa HOM05D007277 ORTHO05D006336 3.0e-14 82.4 148 37.8
QL07p042928 Quercus lobata HOM05D007277 ORTHO05D006336 3.0e-14 82.4 110 46.4
FAN08G2286 Fragaria x ananassa HOM05D007277 ORTHO05D006336 8.7e-14 80.9 96 46.9
FvH4_5g13220 Fragaria vesca HOM05D007277 ORTHO05D006336 1.5e-13 80.1 104 48.1
RcHm_v2.0_Chr7g0240781 Rosa chinensis HOM05D007277 ORTHO05D006336 1.5e-13 80.1 113 42.5
RcHm_v2.0_Chr7g0241491 Rosa chinensis HOM05D007277 ORTHO05D006336 1.5e-13 80.1 115 40.9
Thecc.03G110900 Theobroma cacao HOM05D007277 ORTHO05D006336 3.3e-13 79.0 107 40.2
Atru.chr12.1464 Acer truncatum HOM05D007277 ORTHO05D006336 1.3e-12 77.0 115 38.3
Ciclev10029817m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.3e-12 77.0 116 38.8
QL07p042908 Quercus lobata HOM05D007277 ORTHO05D006336 1.6e-12 76.6 111 40.5
Ciclev10024167m.g Citrus clementina HOM05D007277 ORTHO05D006336 2.1e-12 76.3 116 41.4
QL07p042983 Quercus lobata HOM05D007277 ORTHO05D006336 3.7e-12 75.5 112 42.0
QL07p042879 Quercus lobata HOM05D007277 ORTHO05D006336 1.1e-11 73.9 110 39.1
FvH4_5g13190 Fragaria vesca HOM05D007277 ORTHO05D013598 1.8e-11 73.2 89 49.4
Gohir.D07G062800 Gossypium hirsutum HOM05D007277 ORTHO05D006336 1.8e-11 73.2 117 36.8
FAN08G2638 Fragaria x ananassa HOM05D007277 ORTHO05D006336 3.1e-11 72.4 79 54.4
QL09p028728 Quercus lobata HOM05D007277 ORTHO05D006336 3.1e-11 72.4 108 41.7
Dinv38624 Davidia involucrata HOM05D007277 ORTHO05D006336 4.1e-11 72.0 114 39.5
Gohir.A07G058000 Gossypium hirsutum HOM05D007277 ORTHO05D006336 1.2e-10 70.5 105 38.1
QL07p042874 Quercus lobata HOM05D007277 ORTHO05D006336 1.2e-10 70.5 110 37.3
DCAR_010189 Daucus carota HOM05D007277 ORTHO05D006336 3.4e-10 68.9 110 36.4
QL10p012835 Quercus lobata HOM05D007277 ORTHO05D006336 3.4e-10 68.9 122 39.3
COL.COLO4_28831 Corchorus olitorius HOM05D007277 ORTHO05D006336 4.5e-10 68.6 110 35.5
Atru.chr9.2085 Acer truncatum HOM05D007277 ORTHO05D006336 7.6e-10 67.8 119 37.8
Cpa.g.sc3.199 Carica papaya HOM05D007277 ORTHO05D006336 1.0e-09 67.4 104 41.3
Cpa.g.sc3.198 Carica papaya HOM05D007277 ORTHO05D006336 1.7e-09 66.6 99 41.4
Rhsim12G0165400 Rhododendron simsii HOM05D007277 ORTHO05D006336 2.9e-09 65.9 112 39.3
Thecc.03G111200 Theobroma cacao HOM05D007277 ORTHO05D006336 2.9e-09 65.9 93 37.6
Cfa021203 Carpinus fangiana HOM05D007277 ORTHO05D006336 3.8e-09 65.5 120 38.3
QL02p080387 Quercus lobata HOM05D007277 ORTHO05D006336 1.1e-08 63.9 111 40.5
QL02p080510 Quercus lobata HOM05D007277 ORTHO05D006336 1.1e-08 63.9 107 36.4
QL10p047937 Quercus lobata HOM05D007277 ORTHO05D006336 1.1e-08 63.9 118 32.2
Gorai.001G066300 Gossypium raimondii HOM05D007277 ORTHO05D006336 1.4e-08 63.5 119 35.3
QL10p051898 Quercus lobata HOM05D007277 ORTHO05D006336 1.9e-08 63.2 116 37.1
Actinidia22592 Actinidia chinensis HOM05D007277 ORTHO05D006336 4.2e-08 62.0 112 32.1
Haze_27687 Corylus avellana HOM05D007277 ORTHO05D006336 4.2e-08 62.0 116 38.8
Haze_27688 Corylus avellana HOM05D007277 ORTHO05D006336 4.2e-08 62.0 116 38.8
Ciclev10023402m.g Citrus clementina HOM05D007277 ORTHO05D006336 7.2e-08 61.2 111 35.1
Cfa002615 Carpinus fangiana HOM05D007277 ORTHO05D006336 9.3e-08 60.8 117 40.2
Actinidia24268 Actinidia chinensis HOM05D007277 ORTHO05D006336 1.6e-07 60.1 105 33.3
Ciclev10023596m.g Citrus clementina HOM05D010635 ORTHO05D006336 2.1e-07 59.7 110 30.9
PGSC0003DMG400024676 Solanum tuberosum HOM05D007277 ORTHO05D006336 2.7e-07 59.3 118 31.4
Cpa.g.sc3.210 Carica papaya HOM05D007277 ORTHO05D006336 3.6e-07 58.9 99 39.4
Cfa002614 Carpinus fangiana HOM05D007277 ORTHO05D006336 3.6e-07 58.9 101 39.6
Actinidia10434 Actinidia chinensis HOM05D007277 ORTHO05D006336 4.6e-07 58.5 100 40.0
Ciclev10024327m.g Citrus clementina HOM05D007277 ORTHO05D006336 6.1e-07 58.2 114 35.1
QL10p052020 Quercus lobata HOM05D007277 ORTHO05D006336 6.1e-07 58.2 124 37.1
Cpa.g.sc3.209 Carica papaya HOM05D007277 ORTHO05D006336 1.3e-06 57.0 90 41.1
Manes.05G115300 Manihot esculenta HOM05D007277 ORTHO05D006336 1.3e-06 57.0 121 32.2
Actinidia24271 Actinidia chinensis HOM05D007277 ORTHO05D006336 1.8e-06 56.6 93 33.3
QL10p048111 Quercus lobata HOM05D010635 ORTHO05D006336 1.8e-06 56.6 111 36.9
Dinv36831 Davidia involucrata HOM05D007277 ORTHO05D006336 5.1e-06 55.1 114 36.8
Ciclev10023444m.g Citrus clementina HOM05D007277 ORTHO05D006336 6.7e-06 54.7 110 31.8
Haze_24866 Corylus avellana HOM05D007277 ORTHO05D006336 6.7e-06 54.7 96 37.5
QL10p048018 Quercus lobata HOM05D007277 ORTHO05D337307 6.7e-06 54.7 115 31.3
CSS0000915 Camellia sinensis var. sinensis HOM05D007277 ORTHO05D006336 8.7e-06 54.3 105 32.4
FAN18G0842 Fragaria x ananassa HOM05D007277 ORTHO05D006336 8.7e-06 54.3 114 34.2
PGSC0003DMG400024518 Solanum tuberosum HOM05D007277 ORTHO05D006336 8.7e-06 54.3 126 28.6


User provided reference genes

Program Settings