Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD14G1093300 Malus domestica HOM05D000223 ORTHO05D008670 5.1e-142 507.7 245 100.0
MD12G1099600 Malus domestica HOM05D000223 ORTHO05D008670 1.3e-100 370.2 319 63.0
Prupe.7G035700 Prunus persica HOM05D000223 ORTHO05D008670 1.2e-82 310.5 319 55.8
RcHm_v2.0_Chr6g0284731 Rosa chinensis HOM05D000223 ORTHO05D008670 5.5e-80 301.6 319 53.6
FvH4_2g18940 Fragaria vesca HOM05D000223 ORTHO05D008670 9.4e-80 300.8 319 52.7
FAN24G3139 Fragaria x ananassa HOM05D000223 ORTHO05D008670 9.4e-80 300.8 319 52.7
FAN15G2663 Fragaria x ananassa HOM05D000223 ORTHO05D008670 4.7e-79 298.5 319 52.4
QL07p013384 Quercus lobata HOM05D000223 ORTHO05D008670 2.8e-76 289.3 320 50.9
CiPaw.10G043700 Carya illinoinensis HOM05D000223 ORTHO05D008670 2.0e-74 283.1 320 49.7
Cfa019954 Carpinus fangiana HOM05D000223 ORTHO05D008670 3.2e-72 275.8 320 49.7
TWI53G0492 Tripterygium wilfordii HOM05D000223 ORTHO05D008670 5.2e-70 268.5 318 46.9
Dinv30090 Davidia involucrata HOM05D000223 ORTHO05D008670 8.8e-70 267.7 317 48.6
Atru.chr1.1351 Acer truncatum HOM05D000223 ORTHO05D008670 1.5e-69 266.9 320 46.6
Thecc.05G122400 Theobroma cacao HOM05D000223 ORTHO05D008670 2.0e-69 266.5 320 46.9
Nn7g36998 Nelumbo nucifera HOM05D000223 ORTHO05D008670 2.6e-69 266.2 319 47.3
Ciclev10011248m.g Citrus clementina HOM05D000223 ORTHO05D008670 1.7e-68 263.5 319 46.4
Oeu044235.1 Olea europaea HOM05D000223 ORTHO05D008670 8.2e-68 261.2 317 47.3
TAR633G1042 Trochodendron aralioides HOM05D000223 ORTHO05D008670 8.2e-68 261.2 316 46.5
GSVIVG01025802001 Vitis vinifera HOM05D000223 ORTHO05D008670 2.4e-67 259.6 320 48.1
Gohir.D13G000200 Gossypium hirsutum HOM05D000223 ORTHO05D008670 3.1e-67 259.2 320 45.9
Manes.08G063732 Manihot esculenta HOM05D000223 ORTHO05D008670 4.1e-67 258.8 320 45.9
COL.COLO4_19401 Corchorus olitorius HOM05D000223 ORTHO05D008670 5.3e-67 258.5 320 44.7
Gorai.013G001000 Gossypium raimondii HOM05D000223 ORTHO05D008670 1.6e-66 256.9 320 45.6
Duzib128G1945 Durio zibethinus HOM05D000223 ORTHO05D008670 2.0e-66 256.5 320 45.3
CANSAT35G0549 Cannabis sativa HOM05D000223 ORTHO05D008670 2.7e-66 256.1 321 45.8
Potri.016G030800 Populus trichocarpa HOM05D000223 ORTHO05D008670 5.9e-66 255.0 319 47.6
Sabra16G0034100 Salix brachista HOM05D000494 ORTHO05D008670 5.9e-66 255.0 319 47.3
Gohir.A13G001700 Gossypium hirsutum HOM05D000223 ORTHO05D008670 2.5e-64 249.6 320 44.7
CSS0040284 Camellia sinensis var. sinensis HOM05D000223 ORTHO05D008670 3.2e-64 249.2 319 47.0
Actinidia17970 Actinidia chinensis HOM05D000494 ORTHO05D008670 4.2e-64 248.8 317 46.1
Ca_05362_v3 Cicer arietinum L. HOM05D000223 ORTHO05D008670 2.1e-63 246.5 319 44.5
Hma1.2p1_0031F.1_g018410 Hydrangea macrophylla HOM05D000223 ORTHO05D008670 1.0e-62 244.2 316 45.9
Sed0010522 Sechium edule HOM05D000223 ORTHO05D008670 1.0e-62 244.2 318 45.0
Haze_20284 Corylus avellana HOM05D000494 ORTHO05D008670 1.8e-62 243.4 295 47.8
Cpa.g.sc37.35 Carica papaya HOM05D000223 ORTHO05D008670 3.0e-62 242.7 320 44.4
Haze_20279 Corylus avellana HOM05D000494 ORTHO05D008670 4.0e-62 242.3 295 47.5
Lalb_Chr21g0316801 Lupinus albus HOM05D000223 ORTHO05D008670 5.2e-62 241.9 317 43.5
PGR142G0562 Punica granatum HOM05D000223 ORTHO05D008670 1.2e-61 240.7 322 45.0
TPR.G16472 Trifolium pratense HOM05D000223 ORTHO05D008670 1.2e-61 240.7 315 45.4
Nitab4.5_0002068g0040 Nicotiana tabacum HOM05D000223 ORTHO05D008670 1.5e-61 240.4 318 46.2
MELO3C009743.2 Cucumis melo HOM05D000223 ORTHO05D008670 3.4e-61 239.2 318 44.7
Cc06_g20510 Coffea canephora HOM05D000494 ORTHO05D008670 7.5e-61 238.0 317 44.8
Glyma.02G162300 Glycine max HOM05D000223 ORTHO05D008670 9.8e-61 237.7 319 43.9
Peaxi162Scf00470g00048 Petunia axillaris HOM05D000223 ORTHO05D008670 2.8e-60 236.1 315 45.1
MBI10_g42733_MAGBIO Magnolia biondii HOM05D000088 ORTHO05D008670 3.7e-60 235.7 222 56.3
Medtr1g050520 Medicago truncatula HOM05D000223 ORTHO05D008670 4.8e-60 235.3 315 44.4
Phvul.007G244300 Phaseolus vulgaris HOM05D000223 ORTHO05D008670 8.3e-60 234.6 319 44.2
VMungo0720G1770 Vigna mungo HOM05D000223 ORTHO05D008670 4.1e-59 232.3 317 43.5
Psat6g095400 Pisum sativum HOM05D000223 ORTHO05D008670 7.0e-59 231.5 315 44.1
Lj5g0002002 Lotus japonicus HOM05D000223 ORTHO05D008670 1.2e-58 230.7 318 43.1
Migut.J01618 Erythranthe guttata HOM05D000223 ORTHO05D008670 1.6e-58 230.3 301 45.2
Solyc01g056690.4 Solanum lycopersicum HOM05D000223 ORTHO05D008670 2.7e-58 229.6 315 42.9
DCAR_020602 Daucus carota HOM05D000223 ORTHO05D008670 5.9e-58 228.4 317 42.9
SalBow6G2441 Salvia bowleyana HOM05D000088 ORTHO05D008670 5.9e-58 228.4 297 46.5
ClCG10G016330 Citrullus lanatus HOM05D000223 ORTHO05D008670 7.7e-58 228.0 318 43.7
ECA247G3244 Erigeron canadensis HOM05D000223 ORTHO05D008670 7.7e-58 228.0 309 44.0
RhsimUnG0209300 Rhododendron simsii HOM05D000494 ORTHO05D008670 7.7e-58 228.0 316 44.3
CAN.G197.1 Capsicum annuum HOM05D000223 ORTHO05D008670 1.0e-57 227.6 321 42.7
HanXRQChr10g0298501 Helianthus annuus HOM05D000223 ORTHO05D008670 2.9e-57 226.1 312 42.9
vmacro07765 Vaccinium macrocarpon HOM05D000088 ORTHO05D008670 2.9e-57 226.1 318 46.2
PSO384G3882 Papaver somniferum HOM05D000223 ORTHO05D008670 3.8e-57 225.7 326 42.6
CsaV3_3G040010 Cucumis sativus L. HOM05D000223 ORTHO05D008670 5.0e-57 225.3 318 43.4
Eucgr.L02445 Eucalyptus grandis HOM05D000223 ORTHO05D008670 5.0e-57 225.3 320 42.8
Sopen01g020840 Solanum pennellii HOM05D000223 ORTHO05D008670 5.0e-57 225.3 315 42.5
Eucgr.K01673 Eucalyptus grandis HOM05D000223 ORTHO05D008670 1.5e-56 223.8 320 42.5
MSTRG.19778 Avicennia marina HOM05D000088 ORTHO05D008670 1.9e-56 223.4 216 56.0
CDE02G3287 Ceratophyllum demersum HOM05D000223 ORTHO05D008670 2.5e-56 223.0 315 43.8
Sc25g0005540 Simmondsia chinensis HOM05D000223 ORTHO05D008670 5.5e-56 221.9 316 43.0
THA.LOC104814580 Tarenaya hassleriana HOM05D000223 ORTHO05D008670 1.6e-55 220.3 318 43.4
Lsat_1_v5_gn_9_32241 Lactuca sativa HOM05D000223 ORTHO05D008670 2.8e-55 219.5 315 41.9
Lj1C1082G8 Lonicera japonica HOM05D000223 ORTHO05D008670 4.7e-55 218.8 378 39.2
BcaC01g05371 Brassica carinata HOM05D000223 ORTHO05D008670 1.4e-54 217.2 317 40.4
Aqoxy1G00057 Aquilegia oxysepala HOM05D000223 ORTHO05D008670 1.8e-54 216.9 319 41.4
BolC3t15109H Brassica oleracea HOM05D000223 ORTHO05D008670 3.0e-54 216.1 317 40.1
arahy.Tifrunner.gnm1.ann1.5JYC56 Arachis hypogaea HOM05D000223 ORTHO05D008670 4.0e-54 215.7 298 43.3
arahy.Tifrunner.gnm1.ann1.DZ1TRF Arachis hypogaea HOM05D000223 ORTHO05D008670 5.2e-54 215.3 298 43.3
C03p27270 Brassica napus HOM05D000223 ORTHO05D008670 5.2e-54 215.3 317 40.1
CARHR135980 Cardamine hirsuta HOM05D000223 ORTHO05D008670 5.2e-54 215.3 316 40.8
Thhalv10016363m.g Eutrema salsugineum HOM05D000223 ORTHO05D008670 8.8e-54 214.5 314 40.8
Carub.0004s2318 Capsella rubella HOM05D000223 ORTHO05D008670 2.6e-53 213.0 316 39.9
Sp4g23190 Schrenkiella parvula HOM05D000223 ORTHO05D008670 2.6e-53 213.0 317 40.7
A03p23000 Brassica napus HOM05D000223 ORTHO05D008670 3.4e-53 212.6 318 40.6
SEGI_16213 Sequoiadendron giganteum HOM05D000494 ORTHO05D008670 3.4e-53 212.6 320 41.6
EL10Ac3g07290 Beta vulgaris HOM05D000223 ORTHO05D008670 7.5e-53 211.5 321 39.9
AL4G38810 Arabidopsis lyrata HOM05D000223 ORTHO05D008670 9.8e-53 211.1 319 40.1
Hma1.2p1_0031F.1_g018430 Hydrangea macrophylla HOM05D000223 ORTHO05D008670 9.8e-53 211.1 208 55.3
SGA_v2.0_scaffold69G23178 Striga asiatica HOM05D000223 ORTHO05D008670 1.3e-52 210.7 314 42.7
Aa31LG3G1240 Aethionema arabicum HOM05D000223 ORTHO05D008670 1.7e-52 210.3 313 41.2
AUR62021044 Chenopodium quinoa HOM05D000223 ORTHO05D008670 1.7e-52 210.3 321 40.8
Os01g0541900 Oryza sativa ssp. japonica HOM05D000223 ORTHO05D008670 3.7e-52 209.1 319 41.1
AUR62018399 Chenopodium quinoa HOM05D000223 ORTHO05D008670 6.3e-52 208.4 321 40.5
BraA03t11523Z Brassica rapa HOM05D000223 ORTHO05D008670 8.3e-52 208.0 318 39.6
AT2G40860 Arabidopsis thaliana HOM05D000223 ORTHO05D008670 1.8e-51 206.8 318 38.1
RhsimUnG0018900 Rhododendron simsii HOM05D000494 ORTHO05D008670 1.8e-51 206.8 297 43.1
Hund19071 Selenicereus undatus HOM05D000223 ORTHO05D008670 9.2e-51 204.5 319 41.7
ATR0724G099 Amborella trichopoda HOM05D000223 ORTHO05D008670 1.2e-50 204.1 324 38.3
Ah.04g150620 Amaranthus hybridus HOM05D000223 ORTHO05D008670 1.2e-47 194.1 319 38.6
BcaNung05542 Brassica carinata HOM05D000088 ORTHO05D008670 1.6e-47 193.7 295 40.3
BcaB01g03508 Brassica carinata HOM05D000223 ORTHO05D008670 1.0e-46 191.0 317 38.2
HPP92_021586 Vanilla planifolia HOM05D000394 ORTHO05D000299 1.5e-45 187.2 264 42.0
SMO115G0162 Selaginella moellendorffii HOM05D000223 ORTHO05D008670 1.6e-39 167.2 303 37.6
Pp3c4_23550 Physcomitrium patens HOM05D000223 ORTHO05D008670 4.7e-39 165.6 326 36.8
AagrBONN_evm.TU.Sc2ySwM_368.1033 Anthoceros agrestis HOM05D000223 ORTHO05D008670 3.3e-32 142.9 208 45.2
Atru.chr1.1332 Acer truncatum HOM05D000223 ORTHO05D008670 3.5e-26 122.9 207 40.1
PRCOL_00003233 Prasinoderma coloniale HOM05D000494 ORTHO05D008670 5.4e-11 72.4 215 30.2
Zm00001eb342010 Zea mays HOM05D000494 ORTHO05D008670 1.6e-10 70.9 145 34.5
Lsat_1_v5_gn_8_95840 Lactuca sativa HOM05D000223 ORTHO05D231427 3.5e-10 69.7 57 59.6
MCO08G027 Micromonas commoda HOM05D000494 ORTHO05D008670 1.7e-09 67.4 232 25.9


User provided reference genes

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