Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD14G1087800 Malus domestica HOM05D006712 ORTHO05D008219 1.0e-134 483.4 244 100.0
RcHm_v2.0_Chr5g0048501 Rosa chinensis HOM05D006712 ORTHO05D008219 1.4e-99 366.7 230 80.4
FAN11G0164 Fragaria x ananassa HOM05D006712 ORTHO05D008219 1.7e-97 359.8 230 78.7
FAN16G2749 Fragaria x ananassa HOM05D006712 ORTHO05D008219 6.4e-97 357.8 230 77.8
Atru.chr3.3110 Acer truncatum HOM05D006712 ORTHO05D008219 1.3e-81 307.0 236 66.5
CSS0013127 Camellia sinensis var. sinensis HOM05D006712 ORTHO05D008219 1.4e-80 303.5 237 65.0
Cfa010172 Carpinus fangiana HOM05D006712 ORTHO05D008219 1.9e-80 303.1 229 67.7
Dinv18839 Davidia involucrata HOM05D006712 ORTHO05D008219 1.6e-79 300.1 232 65.1
Potri.001G216500 Populus trichocarpa HOM05D006712 ORTHO05D008219 2.1e-79 299.7 234 65.4
CiPaw.13G129200 Carya illinoinensis HOM05D006712 ORTHO05D008219 1.0e-78 297.4 232 65.1
Thecc.09G272000 Theobroma cacao HOM05D006712 ORTHO05D008219 2.3e-78 296.2 229 66.4
Lj1A268G10 Lonicera japonica HOM05D006712 ORTHO05D008219 5.1e-78 295.0 230 68.3
CAN.G919.48 Capsicum annuum HOM05D006712 ORTHO05D008219 8.8e-78 294.3 232 66.8
CsaV3_1G043820 Cucumis sativus L. HOM05D006712 ORTHO05D008219 2.5e-77 292.7 232 64.7
Duzib168G2384 Durio zibethinus HOM05D006712 ORTHO05D008219 7.4e-77 291.2 229 65.5
GSVIVG01037582001 Vitis vinifera HOM05D006712 ORTHO05D008219 1.7e-76 290.0 230 64.8
ClCG03G012180 Citrullus lanatus HOM05D006712 ORTHO05D008219 2.8e-76 289.3 233 65.7
Sed0013977 Sechium edule HOM05D006712 ORTHO05D008219 3.7e-76 288.9 232 64.2
Eucgr.B03815 Eucalyptus grandis HOM05D006712 ORTHO05D008219 4.8e-76 288.5 230 66.1
Hma1.2p1_0101F.1_g049480 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 6.3e-76 288.1 230 65.2
MELO3C015061.2 Cucumis melo HOM05D006712 ORTHO05D008219 1.4e-75 287.0 232 64.2
Ciclev10028702m.g Citrus clementina HOM05D006712 ORTHO05D008219 3.1e-75 285.8 232 64.7
PGSC0003DMG400005929 Solanum tuberosum HOM05D006712 ORTHO05D008219 1.2e-74 283.9 232 64.7
TWI31G0890 Tripterygium wilfordii HOM05D006712 ORTHO05D008219 1.2e-74 283.9 229 64.6
arahy.Tifrunner.gnm1.ann1.4CVW1F Arachis hypogaea HOM05D006712 ORTHO05D008219 1.7e-73 280.0 233 63.5
Gorai.006G115800 Gossypium raimondii HOM05D006712 ORTHO05D008219 1.7e-73 280.0 231 63.2
TAR623G0680 Trochodendron aralioides HOM05D006712 ORTHO05D008219 1.7e-73 280.0 232 63.4
Glyma.11G178255 Glycine max HOM05D006712 ORTHO05D008219 2.9e-73 279.3 237 62.0
Gohir.D09G098800 Gossypium hirsutum HOM05D006712 ORTHO05D008219 5.0e-73 278.5 229 63.3
Gohir.A09G099400 Gossypium hirsutum HOM05D006712 ORTHO05D008219 6.5e-73 278.1 229 65.1
GSVIVG01024643001 Vitis vinifera HOM05D006712 ORTHO05D008219 1.1e-72 277.3 230 63.9
Sopen06g030560 Solanum pennellii HOM05D006712 ORTHO05D008219 1.4e-72 276.9 230 64.3
COL.COLO4_25432 Corchorus olitorius HOM05D006712 ORTHO05D008219 1.9e-72 276.6 232 62.5
Lj3g0027754 Lotus japonicus HOM05D006712 ORTHO05D008219 1.6e-71 273.5 232 62.1
Nitab4.5_0008897g0020 Nicotiana tabacum HOM05D006712 ORTHO05D008219 2.7e-71 272.7 237 62.4
Peaxi162Scf00098g00079 Petunia axillaris HOM05D006712 ORTHO05D008219 2.7e-71 272.7 232 64.7
Sp6g23080 Schrenkiella parvula HOM05D006712 ORTHO05D008219 4.7e-71 271.9 229 60.3
VMungo1127G0962 Vigna mungo HOM05D006712 ORTHO05D008219 4.7e-71 271.9 232 61.2
Glyma.12G094900 Glycine max HOM05D006712 ORTHO05D008219 6.1e-71 271.6 230 62.6
Lalb_Chr19g0136261 Lupinus albus HOM05D006712 ORTHO05D008219 6.1e-71 271.6 233 61.8
Phvul.011G099200 Phaseolus vulgaris HOM05D006712 ORTHO05D008219 7.9e-71 271.2 232 61.2
THA.LOC104810933 Tarenaya hassleriana HOM05D006712 ORTHO05D008219 1.0e-70 270.8 232 59.9
Manes.11G101400 Manihot esculenta HOM05D006712 ORTHO05D008219 2.3e-70 269.6 232 61.6
Prupe.7G038700 Prunus persica HOM05D006712 ORTHO05D008219 2.3e-70 269.6 236 64.0
Hund20948 Selenicereus undatus HOM05D006712 ORTHO05D008219 3.9e-70 268.9 240 60.0
CARHR191410 Cardamine hirsuta HOM05D006712 ORTHO05D008219 1.1e-69 267.3 229 60.3
Cc01_g07690 Coffea canephora HOM05D006712 ORTHO05D008219 1.1e-69 267.3 232 60.8
AL6G33100 Arabidopsis lyrata HOM05D006712 ORTHO05D008219 2.6e-69 266.2 229 59.0
MSTRG.17680 Avicennia marina HOM05D006712 ORTHO05D008219 4.4e-69 265.4 234 60.7
Carub.0006s1976 Capsella rubella HOM05D006712 ORTHO05D008219 5.7e-69 265.0 229 59.4
Lalb_Chr03g0028431 Lupinus albus HOM05D006712 ORTHO05D008219 5.7e-69 265.0 232 61.6
Aa31LG1G13310 Aethionema arabicum HOM05D006712 ORTHO05D008219 9.7e-69 264.2 229 58.5
AUR62020228 Chenopodium quinoa HOM05D006712 ORTHO05D008219 1.7e-68 263.5 233 61.4
AT5G22120 Arabidopsis thaliana HOM05D006712 ORTHO05D008219 2.2e-68 263.1 229 59.8
AUR62001554 Chenopodium quinoa HOM05D006712 ORTHO05D008219 2.2e-68 263.1 233 61.4
Rhsim13G0196500 Rhododendron simsii HOM05D006712 ORTHO05D008219 1.1e-67 260.8 321 47.0
Sc21g0006790 Simmondsia chinensis HOM05D006712 ORTHO05D008219 1.1e-67 260.8 230 60.0
BcaB01g04741 Brassica carinata HOM05D006712 ORTHO05D008219 1.4e-67 260.4 230 58.3
BcaC01g06601 Brassica carinata HOM05D006712 ORTHO05D008219 2.4e-67 259.6 234 56.8
A03p10600 Brassica napus HOM05D006712 ORTHO05D008219 2.4e-67 259.6 229 57.6
BolC3t13693H Brassica oleracea HOM05D006712 ORTHO05D008219 2.4e-67 259.6 234 56.8
SalBow3G4582 Salvia bowleyana HOM05D006712 ORTHO05D008219 2.4e-67 259.6 234 61.1
arahy.Tifrunner.gnm1.ann1.UJS8TC Arachis hypogaea HOM05D006712 ORTHO05D008219 4.1e-67 258.8 225 60.9
BraA03t10372Z Brassica rapa HOM05D006712 ORTHO05D008219 4.1e-67 258.8 229 57.6
DCAR_014052 Daucus carota HOM05D006712 ORTHO05D008219 4.1e-67 258.8 239 56.9
Aqoxy1G00652 Aquilegia oxysepala HOM05D006712 ORTHO05D008219 9.1e-67 257.7 230 60.0
C03p12200 Brassica napus HOM05D006712 ORTHO05D008219 9.1e-67 257.7 229 57.6
Nitab4.5_0000380g0060 Nicotiana tabacum HOM05D006712 ORTHO05D008219 7.7e-66 254.6 251 58.2
Migut.N02451 Erythranthe guttata HOM05D006712 ORTHO05D008219 1.3e-65 253.8 249 55.4
Hma1.2p1_0101F.1_g049490 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 3.8e-65 252.3 231 59.3
EL10Ac7g16293 Beta vulgaris HOM05D006712 ORTHO05D008219 1.9e-64 250.0 233 59.2
Oeu009041.1 Olea europaea HOM05D006712 ORTHO05D008219 2.5e-64 249.6 232 59.5
FvH4_3g26410 Fragaria vesca HOM05D006712 ORTHO05D008219 3.2e-64 249.2 232 59.9
PSO384G4991 Papaver somniferum HOM05D006712 ORTHO05D008219 4.7e-63 245.4 237 58.2
PSO339G1919 Papaver somniferum HOM05D006712 ORTHO05D008219 2.0e-61 240.0 237 57.8
Ca_19473_v3 Cicer arietinum L. HOM05D006712 ORTHO05D008219 4.4e-61 238.8 234 58.1
Medtr4g051518 Medicago truncatula HOM05D006712 ORTHO05D008219 3.7e-60 235.7 236 54.7
Actinidia07277 Actinidia chinensis HOM05D006712 ORTHO05D008219 4.8e-60 235.3 225 57.3
MBI17_g02433_MAGBIO Magnolia biondii HOM05D006712 ORTHO05D008219 1.4e-59 233.8 279 48.7
Lsat_1_v5_gn_2_34521 Lactuca sativa HOM05D006712 ORTHO05D008219 2.0e-58 229.9 232 55.2
ECA238G0730 Erigeron canadensis HOM05D006712 ORTHO05D008219 1.0e-57 227.6 212 56.6
HanXRQChr04g0096771 Helianthus annuus HOM05D006712 ORTHO05D008219 1.7e-57 226.9 227 54.6
Psat7g204400 Pisum sativum HOM05D006712 ORTHO05D008219 1.5e-56 223.8 236 55.1
BcaC04g19542 Brassica carinata HOM05D006712 ORTHO05D008219 5.2e-54 215.3 231 51.5
BcaB08g36451 Brassica carinata HOM05D002527 ORTHO05D008219 1.2e-53 214.2 248 48.4
QL01p019587 Quercus lobata HOM05D006712 ORTHO05D008219 5.7e-53 211.8 149 69.1
unitig_27.g25124 Utricularia gibba HOM05D006712 ORTHO05D008219 1.1e-51 207.6 232 52.2
TPR.G4637 Trifolium pratense HOM05D006712 ORTHO05D008219 1.4e-51 207.2 275 46.9
Os01g0965600 Oryza sativa ssp. japonica HOM05D006712 ORTHO05D008219 2.4e-51 206.5 241 50.6
CDE06G0581 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 5.3e-51 205.3 204 51.5
Zm00001eb282230 Zea mays HOM05D006712 ORTHO05D008219 5.9e-50 201.8 239 47.7
SHI25255 Sapria himalayana HOM05D000265 ORTHO05D000161 1.9e-48 196.8 228 46.1
Thhalv10013868m.g Eutrema salsugineum HOM05D006712 ORTHO05D008219 4.2e-48 195.7 196 51.5
vmacro03955 Vaccinium macrocarpon HOM05D006712 ORTHO05D008219 2.7e-47 193.0 274 45.3
Cpa.g.sc103.11 Carica papaya HOM05D006712 ORTHO05D008219 4.0e-46 189.1 175 58.3
Actinidia24254 Actinidia chinensis HOM05D006712 ORTHO05D008219 8.8e-46 188.0 232 47.4
Haze_23559 Corylus avellana HOM05D006712 ORTHO05D008219 2.0e-45 186.8 136 69.9
SEGI_35195 Sequoiadendron giganteum HOM05D006712 ORTHO05D008219 9.8e-45 184.5 239 46.4
HPP92_002650 Vanilla planifolia HOM05D006712 ORTHO05D008219 2.8e-44 183.0 246 45.1
SGA_v2.0_scaffold92G28138 Striga asiatica HOM05D006712 ORTHO05D008219 2.4e-43 179.9 166 57.2
Sabra16G0127200 Salix brachista HOM05D006712 ORTHO05D008219 1.0e-38 164.5 136 60.3
Thecc.09G272200 Theobroma cacao HOM05D006712 ORTHO05D008219 9.8e-37 157.9 139 60.4
C09p54580 Brassica napus HOM05D006712 ORTHO05D008219 1.0e-30 137.9 147 54.4
BolC9t58325H Brassica oleracea HOM05D006712 ORTHO05D008219 1.0e-30 137.9 147 54.4
Ah.15g099020 Amaranthus hybridus HOM05D006712 ORTHO05D008219 6.8e-30 135.2 140 55.7
BraA10t43946Z Brassica rapa HOM05D006712 ORTHO05D008219 3.4e-29 132.9 209 45.0
Nn6g34683 Nelumbo nucifera HOM05D006712 ORTHO05D008219 4.9e-28 129.0 255 36.1
A10p18660 Brassica napus HOM05D002527 ORTHO05D002865 6.4e-28 128.6 190 46.3
FAN21G2251 Fragaria x ananassa HOM05D006712 ORTHO05D008219 1.5e-24 117.5 64 89.1
BcaC04g19541 Brassica carinata HOM05D002527 ORTHO05D002865 1.9e-24 117.1 92 64.1
Mapoly0027s0100 Marchantia polymorpha HOM05D006712 ORTHO05D008219 1.9e-24 117.1 246 33.7
SMO119G0218 Selaginella moellendorffii HOM05D006712 ORTHO05D008219 3.6e-23 112.8 188 37.8
ATR0772G163 Amborella trichopoda HOM05D006712 ORTHO05D008219 1.8e-22 110.5 153 45.1
Pp3c7_620 Physcomitrium patens HOM05D006712 ORTHO05D008219 1.2e-21 107.8 232 36.2
Medtr4g051435 Medicago truncatula HOM05D000445 ORTHO05D000314 5.8e-21 105.5 112 51.8
AagrBONN_evm.TU.Sc2ySwM_117.1746 Anthoceros agrestis HOM05D006712 ORTHO05D008219 6.4e-20 102.1 202 36.6
Sabra16G0127300 Salix brachista HOM05D006712 ORTHO05D008219 1.9e-19 100.5 66 77.3
ATR0772G219 Amborella trichopoda HOM05D006712 ORTHO05D008219 2.1e-18 97.1 78 62.8
QL01p019597 Quercus lobata HOM05D006712 ORTHO05D008219 1.3e-17 94.4 82 61.0
CBR_g40336 Chara braunii HOM05D006712 ORTHO05D008219 2.1e-15 87.0 228 29.8
BcaC01g06603 Brassica carinata HOM05D006712 ORTHO05D008219 4.9e-12 75.9 75 57.3
CDE07G1644 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 6.4e-12 75.5 70 57.1
Duzib170G0178 Durio zibethinus HOM05D006712 ORTHO05D008219 3.2e-11 73.2 94 46.8
C09p54560 Brassica napus HOM05D000021 ORTHO05D000010 3.3e-08 63.2 46 60.9
BolC9t58324H Brassica oleracea HOM05D000021 ORTHO05D000010 3.3e-08 63.2 46 60.9
BcaC04g19543 Brassica carinata HOM05D006712 ORTHO05D008219 5.2e-06 55.8 39 64.1


User provided reference genes

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