Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD14G1074900 Malus domestica HOM05D007198 ORTHO05D008969 2.1e-100 369.0 183 100.0
MD10G1272600 Malus domestica HOM05D007198 ORTHO05D008969 8.6e-62 240.7 126 96.8
MD02G1301600 Malus domestica HOM05D007198 ORTHO05D008969 2.1e-60 236.1 130 93.1
MD02G1301800 Malus domestica HOM05D007198 ORTHO05D008969 4.9e-57 224.9 130 89.2
Prupe.7G134300 Prunus persica HOM05D007198 ORTHO05D008969 2.5e-53 212.6 130 83.1
RcHm_v2.0_Chr2g0105351 Rosa chinensis HOM05D007198 ORTHO05D008969 5.2e-51 204.9 125 82.4
FvH4_1g15950 Fragaria vesca HOM05D007198 ORTHO05D008969 1.6e-47 193.4 125 79.2
Dinv39859 Davidia involucrata HOM05D007198 ORTHO05D008969 6.0e-47 191.4 133 72.9
Actinidia16498 Actinidia chinensis HOM05D007198 ORTHO05D008969 3.9e-46 188.7 129 74.4
CSS0000534 Camellia sinensis var. sinensis HOM05D007198 ORTHO05D008969 1.9e-45 186.4 133 72.2
CSS0048673 Camellia sinensis var. sinensis HOM05D007198 ORTHO05D008969 1.9e-45 186.4 133 72.2
CANSAT01G0326 Cannabis sativa HOM05D007198 ORTHO05D008969 2.5e-45 186.0 130 71.5
FAN19G3022 Fragaria x ananassa HOM05D007198 ORTHO05D008969 2.5e-45 186.0 133 74.4
QL06p041746 Quercus lobata HOM05D007198 ORTHO05D008969 9.6e-45 184.1 125 73.6
Eucgr.H01658 Eucalyptus grandis HOM05D007198 ORTHO05D008969 1.6e-44 183.3 131 69.5
ECA232G0395 Erigeron canadensis HOM05D007198 ORTHO05D008969 3.6e-44 182.2 133 70.7
CiPaw.01G018700 Carya illinoinensis HOM05D007198 ORTHO05D008969 1.8e-43 179.9 125 72.8
Hma1.2p1_0461F.1_g157845 Hydrangea macrophylla HOM05D007198 ORTHO05D008969 1.8e-43 179.9 130 71.5
HanXRQChr07g0191591 Helianthus annuus HOM05D007198 ORTHO05D008969 2.4e-43 179.5 128 71.1
Lj4A144T46 Lonicera japonica HOM05D007198 ORTHO05D008969 2.4e-43 179.5 129 67.4
Manes.12G101406 Manihot esculenta HOM05D007198 ORTHO05D008969 4.0e-43 178.7 126 70.6
DCAR_010899 Daucus carota HOM05D007198 ORTHO05D008969 5.2e-43 178.3 130 68.5
Duzib264G0904 Durio zibethinus HOM05D007198 ORTHO05D008969 5.2e-43 178.3 125 73.6
TWI09G1591 Tripterygium wilfordii HOM05D007198 ORTHO05D008969 9.0e-43 177.6 130 70.0
Cpa.g.sc55.159 Carica papaya HOM05D007198 ORTHO05D008969 1.2e-42 177.2 151 62.3
Rhsim08G0101100 Rhododendron simsii HOM05D007198 ORTHO05D008969 1.5e-42 176.8 128 71.9
GSVIVG01022140001 Vitis vinifera HOM05D007198 ORTHO05D008969 1.5e-42 176.8 130 70.8
COL.COLO4_11404 Corchorus olitorius HOM05D007198 ORTHO05D008969 4.4e-42 175.3 130 69.2
Peaxi162Scf00450g00621 Petunia axillaris HOM05D007198 ORTHO05D008969 4.4e-42 175.3 128 67.2
CsaV3_6G043210 Cucumis sativus L. HOM05D007198 ORTHO05D008969 5.8e-42 174.9 130 69.2
TAR628G0194 Trochodendron aralioides HOM05D007198 ORTHO05D008969 7.6e-42 174.5 125 71.2
Haze_15409 Corylus avellana HOM05D007198 ORTHO05D008969 9.9e-42 174.1 156 61.5
Sed0013660 Sechium edule HOM05D007198 ORTHO05D008969 9.9e-42 174.1 125 70.4
PSO210G2416 Papaver somniferum HOM05D007198 ORTHO05D008969 1.3e-41 173.7 130 67.7
ClCG01G016780 Citrullus lanatus HOM05D007198 ORTHO05D008969 1.7e-41 173.3 130 69.2
Gorai.008G075300 Gossypium raimondii HOM05D007198 ORTHO05D008969 1.7e-41 173.3 124 70.2
Atru.BG.94.p Acer truncatum HOM05D007198 ORTHO05D008969 2.9e-41 172.6 125 69.6
Gohir.D12G068800 Gossypium hirsutum HOM05D007198 ORTHO05D008969 2.9e-41 172.6 128 68.0
Ciclev10026429m.g Citrus clementina HOM05D007198 ORTHO05D008969 4.9e-41 171.8 135 64.4
Lsat_1_v5_gn_4_166740 Lactuca sativa HOM05D007198 ORTHO05D008969 6.4e-41 171.4 128 68.0
PSO170G6483 Papaver somniferum HOM05D007198 ORTHO05D008969 8.4e-41 171.0 125 68.8
MELO3C007557.2 Cucumis melo HOM05D007198 ORTHO05D008969 1.9e-40 169.9 130 66.9
Thhalv10026229m.g Eutrema salsugineum HOM05D007198 ORTHO05D008969 1.9e-40 169.9 148 59.5
Nn1g04876 Nelumbo nucifera HOM05D007198 ORTHO05D008969 1.9e-40 169.9 130 66.9
MSTRG.2886 Avicennia marina HOM05D007198 ORTHO05D008969 2.4e-40 169.5 134 66.4
Gohir.A12G069000 Gossypium hirsutum HOM05D007198 ORTHO05D008969 4.2e-40 168.7 125 68.0
Sp7g34740 Schrenkiella parvula HOM05D007198 ORTHO05D008969 4.2e-40 168.7 133 61.7
CAN.G836.78 Capsicum annuum HOM05D007198 ORTHO05D008969 9.3e-40 167.5 147 56.5
MBI02_g02990_MAGBIO Magnolia biondii HOM05D007198 ORTHO05D008969 1.2e-39 167.2 130 63.1
Sc16g0004690 Simmondsia chinensis HOM05D007198 ORTHO05D008969 1.2e-39 167.2 130 65.4
Carub.0007s0322 Capsella rubella HOM05D007198 ORTHO05D008969 1.6e-39 166.8 133 62.4
CARHR245490 Cardamine hirsuta HOM05D007198 ORTHO05D008969 2.1e-39 166.4 129 63.6
AL7G13790 Arabidopsis lyrata HOM05D007198 ORTHO05D008969 3.5e-39 165.6 133 60.2
AT4G37020 Arabidopsis thaliana HOM05D007198 ORTHO05D008969 1.0e-38 164.1 133 60.2
PGR102G0107 Punica granatum HOM05D007198 ORTHO05D008969 1.0e-38 164.1 131 63.4
Cc07_g05960 Coffea canephora HOM05D007198 ORTHO05D008969 1.3e-38 163.7 130 64.6
Migut.H00436 Erythranthe guttata HOM05D007198 ORTHO05D008969 3.0e-38 162.5 133 62.4
Sopen02g035380 Solanum pennellii HOM05D007198 ORTHO05D008969 3.9e-38 162.2 128 64.8
BcaC01g00428 Brassica carinata HOM05D007198 ORTHO05D008969 6.6e-38 161.4 151 54.3
Aqoxy6G01332 Aquilegia oxysepala HOM05D007198 ORTHO05D008969 1.1e-37 160.6 125 64.8
Phvul.002G019200 Phaseolus vulgaris HOM05D007198 ORTHO05D008969 1.1e-37 160.6 147 55.8
BcaB03g12356 Brassica carinata HOM05D007198 ORTHO05D008969 1.9e-37 159.8 129 60.5
Solyc02g090750.4 Solanum lycopersicum HOM05D007198 ORTHO05D008969 1.9e-37 159.8 128 64.1
BolC3t20215H Brassica oleracea HOM05D007198 ORTHO05D008969 4.3e-37 158.7 132 58.3
AUR62001938 Chenopodium quinoa HOM05D000362 ORTHO05D008969 1.3e-36 157.1 130 62.3
BraA08t34210Z Brassica rapa HOM05D007198 ORTHO05D008969 1.6e-36 156.8 131 57.3
Glyma.01G185700 Glycine max HOM05D007198 ORTHO05D008969 1.6e-36 156.8 128 60.2
Nitab4.5_0001034g0170 Nicotiana tabacum HOM05D007198 ORTHO05D008969 2.1e-36 156.4 110 70.0
EL10Ac6g15754 Beta vulgaris HOM05D007198 ORTHO05D008969 6.2e-36 154.8 128 63.3
Aa31LG6G13950 Aethionema arabicum HOM05D007198 ORTHO05D008969 8.1e-36 154.5 157 53.5
AUR62003873 Chenopodium quinoa HOM05D007198 ORTHO05D008969 1.1e-35 154.1 130 62.3
Potri.007G043200 Populus trichocarpa HOM05D007198 ORTHO05D008969 1.1e-35 154.1 143 60.1
VMungo1215G1587 Vigna mungo HOM05D007198 ORTHO05D008969 1.1e-35 154.1 147 54.4
SGA_v2.0_scaffold15G07292 Striga asiatica HOM05D007198 ORTHO05D008969 2.4e-35 152.9 130 61.5
Psat2g167000 Pisum sativum HOM05D007198 ORTHO05D008969 9.0e-35 151.0 128 57.8
Sabra07G0038100 Salix brachista HOM05D007198 ORTHO05D008969 9.0e-35 151.0 139 58.3
Os10g0388900 Oryza sativa ssp. japonica HOM05D007198 ORTHO05D008969 1.2e-34 150.6 146 55.5
TPR.G21270 Trifolium pratense HOM05D007198 ORTHO05D008969 1.2e-34 150.6 128 57.0
ATR0753G086 Amborella trichopoda HOM05D007198 ORTHO05D008969 3.4e-34 149.1 125 56.8
Zm00001eb223810 Zea mays HOM05D007198 ORTHO05D008969 5.8e-34 148.3 126 61.1
CDE04G0918 Ceratophyllum demersum HOM05D007198 ORTHO05D008969 9.9e-34 147.5 130 56.2
Medtr5g017490 Medicago truncatula HOM05D007198 ORTHO05D008969 1.7e-33 146.7 128 55.5
Lalb_Chr09g0323151 Lupinus albus HOM05D007198 ORTHO05D008969 2.9e-33 146.0 128 54.7
Lj2g0004070 Lotus japonicus HOM05D007198 ORTHO05D008969 1.1e-32 144.1 149 49.7
PGSC0003DMG402015781 Solanum tuberosum HOM05D007198 ORTHO05D008969 4.6e-31 138.7 108 65.7
arahy.Tifrunner.gnm1.ann1.VZ1EEZ Arachis hypogaea HOM05D007198 ORTHO05D008969 1.6e-28 130.2 128 51.6
Actinidia03790 Actinidia chinensis HOM05D007198 ORTHO05D008969 2.1e-28 129.8 93 67.7
FAN23G1494 Fragaria x ananassa HOM05D007198 ORTHO05D008969 3.7e-28 129.0 91 71.4
arahy.Tifrunner.gnm1.ann1.ETA9G6 Arachis hypogaea HOM05D007198 ORTHO05D008969 8.1e-28 127.9 126 52.4
Thecc.01G054900 Theobroma cacao HOM05D007198 ORTHO05D008969 4.0e-27 125.6 96 64.6
unitig_899.g14658 Utricularia gibba HOM05D007198 ORTHO05D008969 2.0e-26 123.2 121 52.1
MD17G1282900 Malus domestica HOM05D007198 ORTHO05D008969 1.4e-24 117.1 58 98.3
Glyma.11G056400 Glycine max HOM05D007198 ORTHO05D008969 3.2e-24 115.9 88 63.6
Nitab4.5_0002016g0040 Nicotiana tabacum HOM05D007198 ORTHO05D008969 4.8e-20 102.1 78 60.3
Pp3c12_24960 Physcomitrium patens HOM05D007198 ORTHO05D008969 1.2e-18 97.4 143 39.9
Ca_24774_v3 Cicer arietinum L. HOM05D007198 ORTHO05D008969 1.5e-18 97.1 91 50.5
Mapoly0001s0095 Marchantia polymorpha HOM05D007198 ORTHO05D008969 2.0e-18 96.7 149 36.9
Oeu024300.1 Olea europaea HOM05D007198 ORTHO05D008969 5.8e-18 95.1 78 59.0
Hund16328 Selenicereus undatus HOM05D007198 ORTHO05D008969 7.1e-16 88.2 83 51.8
Ah.03g144890 Amaranthus hybridus HOM05D007198 ORTHO05D008969 6.0e-15 85.1 78 53.8
SMO146G0205 Selaginella moellendorffii HOM05D007198 ORTHO05D008969 3.0e-14 82.8 129 36.4
SEGI_34131 Sequoiadendron giganteum HOM05D007198 ORTHO05D008969 8.7e-14 81.3 122 37.7
CBR_g37151 Chara braunii HOM05D007198 ORTHO05D008969 1.9e-13 80.1 160 30.6
Hund16330 Selenicereus undatus HOM05D007198 ORTHO05D008969 2.8e-12 76.3 55 70.9


User provided reference genes

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