Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 9.3e-309 1062.8 556 100.0
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 8.2e-265 916.8 560 86.4
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 3.4e-263 911.4 557 86.5
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.5e-261 905.2 557 85.8
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.0e-259 899.8 572 84.1
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.4e-259 899.4 557 85.3
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 5.1e-259 897.5 557 85.3
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.8e-254 881.3 557 84.6
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 1.9e-237 825.9 556 80.6
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 2.1e-228 795.8 571 73.7
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 4.7e-228 794.7 570 74.9
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 6.1e-228 794.3 571 73.7
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 1.4e-227 793.1 558 75.3
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 1.8e-227 792.7 571 74.1
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 2.2e-225 785.8 560 74.8
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 3.7e-225 785.0 564 75.5
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 4.9e-225 784.6 568 73.8
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 6.4e-225 784.3 559 74.2
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 1.8e-224 782.7 565 75.0
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 1.8e-224 782.7 573 73.1
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 2.4e-224 782.3 561 74.2
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 5.4e-224 781.2 572 74.1
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 1.6e-223 779.6 566 73.0
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 2.7e-223 778.9 562 73.5
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 3.5e-223 778.5 571 73.4
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 4.6e-223 778.1 571 72.9
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 4.6e-223 778.1 553 75.0
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 1.0e-222 776.9 562 73.5
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 1.7e-222 776.2 565 74.5
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 3.0e-222 775.4 559 73.7
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 6.6e-222 774.2 560 73.8
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 2.5e-221 772.3 566 72.4
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 9.5e-221 770.4 569 72.1
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 1.2e-220 770.0 568 72.7
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 2.1e-220 769.2 566 72.1
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 1.0e-219 766.9 565 73.1
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 1.8e-219 766.1 565 73.1
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 2.6e-218 762.3 560 72.9
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 9.2e-216 753.8 564 71.6
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 1.2e-215 753.4 561 72.2
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 3.5e-215 751.9 632 66.3
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 6.0e-215 751.1 566 70.3
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 7.8e-215 750.7 566 72.4
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 1.0e-214 750.4 573 71.4
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 3.0e-214 748.8 576 69.8
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 2.8e-212 742.3 568 69.7
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 6.2e-212 741.1 563 70.7
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 6.8e-211 737.6 564 70.7
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 7.5e-210 734.2 572 69.9
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 1.3e-209 733.4 595 67.6
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 2.2e-209 732.6 564 71.6
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 3.2e-208 728.8 568 70.8
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 1.6e-207 726.5 567 69.1
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 3.5e-207 725.3 570 67.5
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 1.3e-206 723.4 564 69.5
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 3.0e-206 722.2 564 69.1
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 1.6e-204 716.5 557 67.9
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 2.8e-204 715.7 557 67.3
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 4.7e-204 714.9 572 68.5
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 8.1e-204 714.1 557 67.5
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 2.3e-203 712.6 557 67.3
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 6.8e-203 711.1 557 67.3
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 6.8e-203 711.1 570 66.5
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 1.2e-202 710.3 557 67.5
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 1.2e-202 710.3 564 67.7
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 2.9e-201 705.7 557 66.8
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 1.2e-199 700.3 587 64.2
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 1.0e-198 697.2 568 67.3
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 1.7e-198 696.4 568 66.9
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 2.3e-198 696.0 557 67.0
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 3.9e-198 695.3 557 67.1
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 5.1e-198 694.9 561 66.1
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 8.6e-198 694.1 557 66.8
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 7.3e-197 691.0 561 67.6
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 4.7e-196 688.3 554 67.9
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 2.1e-191 672.9 571 64.3
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 3.5e-191 672.2 567 64.2
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 9.0e-187 657.5 557 63.6
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 9.0e-187 657.5 557 63.6
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 2.0e-186 656.4 557 63.7
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 2.0e-186 656.4 557 63.7
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 5.8e-186 654.8 557 63.6
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 2.1e-183 646.4 561 64.5
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 1.8e-182 643.3 529 67.3
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 2.5e-181 639.4 564 63.1
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 4.5e-178 628.6 525 64.8
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 5.8e-178 628.2 569 61.3
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 2.9e-177 625.9 503 67.8
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 1.0e-174 617.5 562 60.9
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 6.7e-174 614.8 574 57.8
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 2.1e-172 609.8 565 59.8
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 2.0e-170 603.2 564 58.9
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 1.3e-169 600.5 482 67.6
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 1.2e-167 594.0 633 55.0
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 1.8e-163 580.1 511 63.2
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 1.5e-146 523.9 403 68.0
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 6.1e-127 458.8 448 60.7
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 5.9e-122 442.2 403 62.8
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 3.0e-118 429.9 565 43.7
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 1.3e-116 424.5 224 94.6
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 1.3e-116 424.5 248 92.7
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 2.2e-116 423.7 560 45.9
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 6.8e-102 375.6 591 39.8
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 3.7e-100 369.8 300 70.0
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 6.6e-97 359.0 589 38.4
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 2.5e-96 357.1 237 76.4
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 3.6e-95 353.2 558 39.4
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 2.3e-94 350.5 307 65.1
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 1.1e-70 271.9 207 69.1
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 2.7e-66 257.3 238 55.5
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 1.6e-63 248.1 366 48.1
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 6.9e-54 216.1 151 75.5
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 6.5e-52 209.5 582 29.0
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 1.2e-50 205.3 578 32.4
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 2.3e-41 174.5 157 67.5
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 2.7e-34 151.0 149 60.4
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.3e-31 142.1 71 91.5
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 2.4e-14 84.7 54 85.2
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 6.8e-09 66.6 41 78.0
THA.LOC104799305 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 1.5e-08 65.5 64 56.2
RcHm_v2.0_Chr3g0480231 Rosa chinensis HOM05D006621 ORTHO05D043305 6.3e-07 60.1 41 80.5


User provided reference genes

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