Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD14G1051600 Malus domestica HOM05D007176 ORTHO05D009050 2.2e-154 549.3 355 100.0
Dinv16365 Davidia involucrata HOM05D007176 ORTHO05D009050 1.8e-119 433.3 355 75.2
RcHm_v2.0_Chr3g0478871 Rosa chinensis HOM05D007176 ORTHO05D009050 5.3e-116 421.8 347 72.3
Thecc.05G178200 Theobroma cacao HOM05D007176 ORTHO05D009050 3.2e-113 412.5 348 70.7
Duzib106G0399 Durio zibethinus HOM05D007176 ORTHO05D009050 5.5e-113 411.8 348 73.0
MD12G1053200 Malus domestica HOM05D007176 ORTHO05D009050 2.1e-112 409.8 356 82.3
Gohir.A04G053500 Gossypium hirsutum HOM05D007176 ORTHO05D009050 7.9e-104 381.3 351 67.2
BcaC07g40246 Brassica carinata HOM05D007176 ORTHO05D009050 5.1e-103 378.6 355 68.5
Prupe.7G084400 Prunus persica HOM05D007176 ORTHO05D009050 2.0e-102 376.7 355 75.2
FAN02G0922 Fragaria x ananassa HOM05D007176 ORTHO05D009050 5.7e-102 375.2 351 68.9
Aa31LG10G13110 Aethionema arabicum HOM05D007176 ORTHO05D009050 7.4e-102 374.8 355 68.2
GSVIVG01033441001 Vitis vinifera HOM05D007176 ORTHO05D009050 1.3e-101 374.0 333 74.5
THA.LOC104802720 Tarenaya hassleriana HOM05D007176 ORTHO05D009050 1.7e-101 373.6 347 67.4
FvH4_6g21620 Fragaria vesca HOM05D007176 ORTHO05D009050 6.3e-101 371.7 351 68.7
FAN14G2546 Fragaria x ananassa HOM05D007176 ORTHO05D009050 2.4e-100 369.8 351 68.4
A09p51090 Brassica napus HOM05D007176 ORTHO05D009050 3.4e-99 365.9 379 63.6
FAN09G2372 Fragaria x ananassa HOM05D007176 ORTHO05D009050 2.9e-98 362.8 351 67.0
Cfa020128 Carpinus fangiana HOM05D007176 ORTHO05D009050 4.7e-96 355.5 361 54.8
FAN05G5781 Fragaria x ananassa HOM05D007176 ORTHO05D009050 1.4e-95 354.0 357 65.8
QL07p025011 Quercus lobata HOM05D007176 ORTHO05D009050 3.0e-95 352.8 349 67.9
C08p33910 Brassica napus HOM05D007176 ORTHO05D009050 8.8e-95 351.3 355 65.1
TAR633G1141 Trochodendron aralioides HOM05D007176 ORTHO05D009050 9.7e-94 347.8 353 67.4
TAR633G0683 Trochodendron aralioides HOM05D007176 ORTHO05D009050 4.8e-93 345.5 353 67.1
CiPaw.09G027300 Carya illinoinensis HOM05D007176 ORTHO05D009050 7.0e-92 341.7 350 66.9
Sabra06G0150500 Salix brachista HOM05D007176 ORTHO05D009050 9.1e-92 341.3 355 70.4
Manes.09G039600 Manihot esculenta HOM05D007176 ORTHO05D009050 2.0e-91 340.1 346 64.2
Cpa.g.sc85.35 Carica papaya HOM05D007176 ORTHO05D009050 1.7e-90 337.0 346 69.4
CANSAT64G0938 Cannabis sativa HOM05D007176 ORTHO05D009050 3.8e-90 335.9 349 68.8
Potri.006G195800 Populus trichocarpa HOM05D007176 ORTHO05D009050 1.9e-89 333.6 356 68.5
Lju124C23T17 Lonicera japonica HOM05D007176 ORTHO05D009050 3.2e-89 332.8 332 68.1
Nn2g15783 Nelumbo nucifera HOM05D007176 ORTHO05D009050 1.2e-88 330.9 353 59.2
Migut.K00028 Erythranthe guttata HOM05D007176 ORTHO05D009050 3.6e-88 329.3 341 64.2
Hma1.2p1_0645F.1_g194890 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 3.6e-88 329.3 357 64.4
Gorai.009G392400 Gossypium raimondii HOM05D007176 ORTHO05D009050 1.0e-87 327.8 296 80.1
CARHR168930 Cardamine hirsuta HOM05D007176 ORTHO05D009050 5.2e-87 325.5 355 61.1
Eucgr.K01865 Eucalyptus grandis HOM05D007176 ORTHO05D009050 5.2e-87 325.5 345 64.3
Sp5g04340 Schrenkiella parvula HOM05D007176 ORTHO05D009050 5.7e-86 322.0 355 61.4
ECA247G1245 Erigeron canadensis HOM05D007176 ORTHO05D009050 1.4e-84 317.4 346 64.7
Sopen06g001340 Solanum pennellii HOM05D007176 ORTHO05D009050 4.1e-84 315.8 344 64.0
COL.COLO4_29390 Corchorus olitorius HOM05D007176 ORTHO05D009050 3.5e-83 312.8 331 65.3
HanXRQChr10g0300591 Helianthus annuus HOM05D007176 ORTHO05D009050 3.8e-82 309.3 348 63.2
Lj5g0009846 Lotus japonicus HOM05D007176 ORTHO05D009050 3.8e-82 309.3 356 60.4
Gohir.D04G094700 Gossypium hirsutum HOM05D007176 ORTHO05D009050 1.9e-81 307.0 276 75.4
PGR142G3952 Punica granatum HOM05D007176 ORTHO05D009050 1.9e-81 307.0 354 64.4
arahy.Tifrunner.gnm1.ann1.5B5G66 Arachis hypogaea HOM05D007176 ORTHO05D009050 2.5e-81 306.6 362 58.3
EL10Ac3g06857 Beta vulgaris HOM05D007176 ORTHO05D009050 2.6e-78 296.6 358 56.7
MBI01_g44281_MAGBIO Magnolia biondii HOM05D007176 ORTHO05D009050 4.4e-78 295.8 334 50.6
arahy.Tifrunner.gnm1.ann1.I5CDLA Arachis hypogaea HOM05D007176 ORTHO05D009050 3.7e-77 292.7 373 55.8
Lsat_1_v5_gn_9_26900 Lactuca sativa HOM05D007176 ORTHO05D009050 3.7e-77 292.7 357 56.9
Rhsim04G0094400 Rhododendron simsii HOM05D007176 ORTHO05D009050 5.3e-76 288.9 355 58.9
TPR.G19346 Trifolium pratense HOM05D007176 ORTHO05D009050 1.2e-75 287.7 377 58.6
Atru.BG.213.p Acer truncatum HOM05D007176 ORTHO05D009050 1.3e-74 284.3 342 67.3
AL5G40300 Arabidopsis lyrata HOM05D007176 ORTHO05D009050 1.3e-74 284.3 355 57.5
BolC8t50987H Brassica oleracea HOM05D000032 ORTHO05D001620 2.2e-74 283.5 276 68.5
Actinidia17284 Actinidia chinensis HOM05D007176 ORTHO05D009050 2.9e-74 283.1 355 57.5
Haze_20048 Corylus avellana HOM05D007176 ORTHO05D009050 1.9e-73 280.4 385 45.7
Haze_20055 Corylus avellana HOM05D007176 ORTHO05D009050 1.9e-73 280.4 385 45.7
SalBow1G6257 Salvia bowleyana HOM05D007176 ORTHO05D009050 7.2e-73 278.5 359 56.8
Sc13g0002490 Simmondsia chinensis HOM05D007176 ORTHO05D009050 7.2e-73 278.5 357 56.6
Thhalv10006065m.g Eutrema salsugineum HOM05D007176 ORTHO05D009050 9.4e-73 278.1 355 57.2
DCAR_019856 Daucus carota HOM05D007176 ORTHO05D009050 3.6e-72 276.2 327 48.0
Carub.0005s2528 Capsella rubella HOM05D007176 ORTHO05D009050 1.0e-71 274.6 355 56.6
Nitab4.5_0008255g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 1.4e-71 274.2 354 51.4
vmacro22113 Vaccinium macrocarpon HOM05D007176 ORTHO05D009050 2.3e-71 273.5 387 43.4
AT3G58530 Arabidopsis thaliana HOM05D007176 ORTHO05D009050 8.8e-71 271.6 355 56.1
CDE04G3485 Ceratophyllum demersum HOM05D007176 ORTHO05D009050 5.7e-70 268.9 349 54.7
CSS0044198 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 9.8e-70 268.1 346 56.9
Peaxi162Scf00258g00925 Petunia axillaris HOM05D007176 ORTHO05D009050 2.0e-67 260.4 351 57.0
PSO675G7508 Papaver somniferum HOM05D007176 ORTHO05D009050 2.7e-67 260.0 292 67.5
Medtr1g054625 Medicago truncatula HOM05D007176 ORTHO05D009050 7.7e-67 258.5 343 57.7
PGSC0003DMG400029168 Solanum tuberosum HOM05D007176 ORTHO05D009050 2.3e-66 256.9 344 58.1
CAN.G111.5 Capsicum annuum HOM05D007176 ORTHO05D009050 1.5e-65 254.2 349 57.0
Os02g0281150 Oryza sativa ssp. japonica HOM05D007176 ORTHO05D009050 2.5e-65 253.4 353 52.1
Solyc06g005380.3 Solanum lycopersicum HOM05D007176 ORTHO05D009050 1.6e-64 250.8 344 57.3
Cc06_g15630 Coffea canephora HOM05D007176 ORTHO05D009050 6.1e-64 248.8 356 56.2
BraA09t40553Z Brassica rapa HOM05D000032 ORTHO05D001620 3.0e-63 246.5 277 61.7
Ca_03573_v3 Cicer arietinum L. HOM05D007176 ORTHO05D009050 1.5e-62 244.2 359 54.6
Ciclev10012430m.g Citrus clementina HOM05D007176 ORTHO05D009050 1.5e-62 244.2 184 71.7
VMungo0720G0788 Vigna mungo HOM05D007176 ORTHO05D009050 1.7e-61 240.7 411 42.3
Lalb_Chr02g0153821 Lupinus albus HOM05D007176 ORTHO05D009050 3.7e-61 239.6 347 54.2
Aqoxy279s002 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 6.3e-61 238.8 348 55.2
Aqoxy2G00051 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 6.3e-61 238.8 348 55.2
Glyma.09G105500 Glycine max HOM05D007176 ORTHO05D009050 1.1e-60 238.0 358 53.6
CSS0035640 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 5.9e-59 232.3 346 53.5
Hma1.2p1_0645F.1_g194900 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 2.3e-58 230.3 292 61.0
AUR62032747 Chenopodium quinoa HOM05D007176 ORTHO05D009050 3.6e-56 223.0 333 51.1
PSO541G4948 Papaver somniferum HOM05D007176 ORTHO05D009050 1.4e-55 221.1 292 58.6
Nitab4.5_0000009g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 2.0e-54 217.2 422 42.7
Ah.13g075580 Amaranthus hybridus HOM05D007176 ORTHO05D009050 7.0e-52 208.8 287 54.7
SGA_v2.0_scaffold274G46490 Striga asiatica HOM05D007176 ORTHO05D009050 6.6e-50 202.2 162 59.9
Zm00001eb237210 Zea mays HOM05D007176 ORTHO05D009050 2.3e-47 193.7 342 47.1
BcaC02g10014 Brassica carinata HOM05D007176 ORTHO05D009050 2.6e-46 190.3 297 51.9
HPP92_010126 Vanilla planifolia HOM05D007176 ORTHO05D009050 3.7e-45 186.4 288 53.1
Atru.chr8.1185 Acer truncatum HOM05D007176 ORTHO05D009050 8.3e-45 185.3 259 68.3
SEGI_09769 Sequoiadendron giganteum HOM05D007176 ORTHO05D009050 2.3e-42 177.2 288 53.1
A04p02540 Brassica napus HOM05D000032 ORTHO05D001620 6.6e-42 175.6 276 44.6
BolC4t24963H Brassica oleracea HOM05D000032 ORTHO05D001620 1.6e-40 171.0 282 51.4
HanXRQChr05g0140621 Helianthus annuus HOM05D007176 ORTHO05D009050 3.6e-40 169.9 210 55.2
Hund24823 Selenicereus undatus HOM05D007176 ORTHO05D009050 8.1e-40 168.7 114 68.4
HanXRQChr10g0316231 Helianthus annuus HOM05D007176 ORTHO05D009050 1.1e-39 168.3 210 54.8
C04p33960 Brassica napus HOM05D007176 ORTHO05D009050 4.0e-39 166.4 282 51.1
Psat6g088000 Pisum sativum HOM05D007176 ORTHO05D009050 4.0e-39 166.4 296 52.7
SMO118G0524 Selaginella moellendorffii HOM05D007176 ORTHO05D009050 4.1e-36 156.4 339 38.9
unitig_736.g22301 Utricularia gibba HOM05D007176 ORTHO05D009050 4.6e-35 152.9 409 39.9
Pp3c23_2930 Physcomitrium patens HOM05D007176 ORTHO05D009050 1.3e-34 151.4 341 37.0
Phvul.007G261900 Phaseolus vulgaris HOM05D007176 ORTHO05D009050 8.4e-29 132.1 298 47.3
AagrBONN_evm.TU.Sc2ySwM_228.1251 Anthoceros agrestis HOM05D007176 ORTHO05D009050 7.1e-28 129.0 346 37.3
Hund24819 Selenicereus undatus HOM05D007176 ORTHO05D001610 1.7e-26 124.4 120 55.0
ATR0001G043 Amborella trichopoda HOM05D007176 ORTHO05D009050 1.1e-25 121.7 275 45.5
Mapoly0209s0007 Marchantia polymorpha HOM05D007176 ORTHO05D009050 8.1e-24 115.5 124 50.0
PRCOL_00005880 Prasinoderma coloniale HOM05D007176 ORTHO05D009050 1.1e-23 115.2 293 29.7
arahy.Tifrunner.gnm1.ann1.0S64XP Arachis hypogaea HOM05D007176 ORTHO05D009050 3.4e-22 110.2 69 72.5
AUR62015309 Chenopodium quinoa HOM05D007176 ORTHO05D009050 5.4e-20 102.8 102 51.0


User provided reference genes

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