Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD14G1036300 Malus domestica HOM05D003774 ORTHO05D010174 4.7e-169 597.8 309 100.0
RcHm_v2.0_Chr7g0227131 Rosa chinensis HOM05D003774 ORTHO05D010174 4.3e-122 441.8 310 77.4
Prupe.1G555700 Prunus persica HOM05D003774 ORTHO05D010174 3.1e-120 435.6 310 76.8
FvH4_5g31600 Fragaria vesca HOM05D003774 ORTHO05D010174 2.4e-112 409.5 310 73.9
FAN08G2588 Fragaria x ananassa HOM05D003774 ORTHO05D010174 1.3e-110 403.7 310 72.6
FAN07G1602 Fragaria x ananassa HOM05D003774 ORTHO05D010174 5.4e-109 398.3 310 72.3
MD04G1056900 Malus domestica HOM05D003774 ORTHO05D010174 5.3e-104 381.7 210 95.7
Manes.18G106000 Manihot esculenta HOM05D003774 ORTHO05D010174 1.5e-95 353.6 286 68.9
CANSAT25G1591 Cannabis sativa HOM05D003774 ORTHO05D010174 4.5e-95 352.1 322 63.4
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 1.3e-94 350.5 309 66.0
Thecc.08G192700 Theobroma cacao HOM05D003774 ORTHO05D010174 1.3e-94 350.5 247 75.3
Cfa012970 Carpinus fangiana HOM05D003774 ORTHO05D010174 1.4e-93 347.1 296 65.9
Ciclev10003535m.g Citrus clementina HOM05D003774 ORTHO05D010174 1.4e-93 347.1 260 73.1
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 1.3e-91 340.5 310 63.2
CiPaw.07G235600 Carya illinoinensis HOM05D003774 ORTHO05D010174 1.5e-90 337.0 246 71.5
PGR042G3332 Punica granatum HOM05D003774 ORTHO05D010174 3.3e-90 335.9 266 69.5
Solyc11g027830.2 Solanum lycopersicum HOM05D003774 ORTHO05D010174 4.8e-89 332.0 267 67.4
PGSC0003DMG400026729 Solanum tuberosum HOM05D003774 ORTHO05D010174 2.4e-88 329.7 267 67.8
Nitab4.5_0005616g0030 Nicotiana tabacum HOM05D003774 ORTHO05D010174 4.1e-88 328.9 243 70.8
Atru.chr13.2372 Acer truncatum HOM05D003774 ORTHO05D010174 6.9e-88 328.2 266 67.3
TWI14G1031 Tripterygium wilfordii HOM05D003774 ORTHO05D010174 9.0e-88 327.8 230 76.1
Cc00_g20990 Coffea canephora HOM05D003774 ORTHO05D010174 1.2e-87 327.4 290 63.4
Nitab4.5_0001463g0060 Nicotiana tabacum HOM05D003774 ORTHO05D010174 3.4e-87 325.9 259 67.2
Peaxi162Scf00688g00424 Petunia axillaris HOM05D003774 ORTHO05D010174 3.4e-87 325.9 242 71.1
Eucgr.F02989 Eucalyptus grandis HOM05D003774 ORTHO05D010174 1.0e-86 324.3 298 61.7
Sopen11g022590 Solanum pennellii HOM05D003774 ORTHO05D010174 2.2e-86 323.2 246 69.5
CAN.G1483.1 Capsicum annuum HOM05D003774 ORTHO05D010174 3.8e-86 322.4 242 69.4
Lsat_1_v5_gn_1_25800 Lactuca sativa HOM05D003774 ORTHO05D010174 1.1e-85 320.9 246 68.3
HanXRQChr02g0036571 Helianthus annuus HOM05D003774 ORTHO05D010174 2.5e-85 319.7 246 68.3
Actinidia29409 Actinidia chinensis HOM05D003774 ORTHO05D010174 9.4e-85 317.8 290 63.4
DCAR_017444 Daucus carota HOM05D003774 ORTHO05D010174 6.1e-84 315.1 307 56.0
PSO782G0406 Papaver somniferum HOM05D003774 ORTHO05D010174 8.8e-83 311.2 277 61.7
MBI03_g45112_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 1.1e-82 310.8 242 69.8
CsaV3_5G040540 Cucumis sativus L. HOM05D003774 ORTHO05D010174 1.5e-82 310.5 244 66.0
Haze_21314 Corylus avellana HOM05D003774 ORTHO05D010174 2.5e-82 309.7 303 61.7
AL1G50100 Arabidopsis lyrata HOM05D003774 ORTHO05D010174 3.3e-82 309.3 313 55.9
PSO170G3079 Papaver somniferum HOM05D003774 ORTHO05D010174 3.3e-82 309.3 270 63.0
Carub.0347s0001 Capsella rubella HOM05D003774 ORTHO05D010174 3.7e-81 305.8 247 65.6
Sp1g30100 Schrenkiella parvula HOM05D003774 ORTHO05D010174 1.8e-80 303.5 247 63.6
THA.LOC104816539 Tarenaya hassleriana HOM05D003774 ORTHO05D010174 2.4e-80 303.1 244 67.6
Thhalv10001819m.g Eutrema salsugineum HOM05D003774 ORTHO05D010174 1.2e-79 300.8 247 64.0
A09p31890 Brassica napus HOM05D003774 ORTHO05D010174 5.0e-78 295.4 247 62.8
BraA09t38729Z Brassica rapa HOM05D003774 ORTHO05D010174 1.1e-77 294.3 247 62.8
BcaC08g43723 Brassica carinata HOM05D003774 ORTHO05D010174 4.2e-77 292.4 247 62.3
BolC6t36225H Brassica oleracea HOM05D003774 ORTHO05D010174 4.2e-77 292.4 247 62.3
Migut.C01324 Erythranthe guttata HOM05D003774 ORTHO05D010174 4.2e-77 292.4 305 56.4
C06p11060 Brassica napus HOM05D003774 ORTHO05D010174 7.2e-77 291.6 247 62.3
GSVIVG01026088001 Vitis vinifera HOM05D003774 ORTHO05D010174 1.2e-76 290.8 241 64.7
BcaB07g33098 Brassica carinata HOM05D003774 ORTHO05D010174 2.1e-76 290.0 247 62.8
ClCG08G000190 Citrullus lanatus HOM05D003774 ORTHO05D010174 1.1e-74 284.3 270 57.4
COL.COLO4_24648 Corchorus olitorius HOM05D003774 ORTHO05D010174 1.3e-73 280.8 283 58.0
Potri.013G105500 Populus trichocarpa HOM05D003774 ORTHO05D010174 4.1e-72 275.8 213 70.4
MBI03_g46804_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 4.5e-71 272.3 205 70.2
Cpa.g.sc66.3 Carica papaya HOM05D003774 ORTHO05D010174 2.9e-70 269.6 208 69.7
ECA247G3883 Erigeron canadensis HOM05D003774 ORTHO05D009174 1.2e-68 264.2 209 64.1
AT1G35340 Arabidopsis thaliana HOM05D003774 ORTHO05D010174 7.0e-64 248.4 208 60.6
SEGI_18058 Sequoiadendron giganteum HOM05D003774 ORTHO05D010174 2.0e-63 246.9 244 54.9
Oeu013897.1 Olea europaea HOM05D003774 ORTHO05D010174 2.7e-63 246.5 209 62.7
Aa31LG6G8720 Aethionema arabicum HOM05D003774 ORTHO05D009174 2.5e-61 240.0 232 57.3
Zm00001eb169160 Zea mays HOM05D003774 ORTHO05D010174 6.8e-59 231.9 246 52.4
Pp3c18_9200 Physcomitrium patens HOM05D003774 ORTHO05D010174 3.8e-54 216.1 244 48.0
Dinv41759 Davidia involucrata HOM05D003774 ORTHO05D010174 1.2e-52 211.1 160 70.0
MELO3C022227.2 Cucumis melo HOM05D003774 ORTHO05D010174 9.2e-48 194.9 304 41.8
Mapoly0085s0045 Marchantia polymorpha HOM05D003774 ORTHO05D010174 1.0e-46 191.4 262 41.6
TAR628G1250 Trochodendron aralioides HOM05D003774 ORTHO05D010174 1.0e-35 154.8 157 59.2
CARHR034170 Cardamine hirsuta HOM05D003774 ORTHO05D010174 9.2e-32 141.7 97 76.3
Rhsim11G0052800 Rhododendron simsii HOM05D003774 ORTHO05D000166 2.0e-31 140.6 100 77.0
MSTRG.1569 Avicennia marina HOM05D003774 ORTHO05D010174 6.0e-31 139.0 124 61.3
MD15G1405700 Malus domestica HOM05D003774 ORTHO05D010174 3.9e-30 136.3 149 57.7
FvH4_5g26640 Fragaria vesca HOM05D003774 ORTHO05D010174 2.8e-28 130.2 116 66.4
Lj7A284G37 Lonicera japonica HOM05D003774 ORTHO05D010174 2.8e-28 130.2 90 78.9
AagrBONN_evm.TU.Sc2ySwM_340.403 Anthoceros agrestis HOM05D000737 ORTHO05D000581 8.9e-27 125.2 233 34.8
Lj7A284T38 Lonicera japonica HOM05D003774 ORTHO05D010174 1.4e-24 117.9 101 63.4
Os11g0219000 Oryza sativa ssp. japonica HOM05D003774 ORTHO05D010174 5.4e-16 89.4 75 66.7
MCO03G373 Micromonas commoda HOM05D003774 ORTHO05D010174 4.9e-09 66.2 138 33.3
CAN.G271.1 Capsicum annuum HOM05D003774 ORTHO05D010174 9.3e-08 62.0 128 36.7
Cre16.g670500 Chlamydomonas reinhardtii HOM05D003774 ORTHO05D010174 9.3e-08 62.0 352 23.6
MBI03_g48045_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 6.0e-07 59.3 47 70.2


User provided reference genes

Program Settings