Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD14G1025900 Malus domestica HOM05D000980 ORTHO05D000649 2.7e-106 388.7 196 100.0
Prupe.6G357300 Prunus persica HOM05D000980 ORTHO05D000649 6.5e-15 85.1 168 36.3
FAN14G4654 Fragaria x ananassa HOM05D000980 ORTHO05D000649 1.9e-14 83.6 158 39.2
FAN09G3547 Fragaria x ananassa HOM05D000980 ORTHO05D000649 8.8e-12 74.7 158 37.3
RcHm_v2.0_Chr3g0448411 Rosa chinensis HOM05D000980 ORTHO05D000649 1.4e-09 67.4 121 36.4
CsaV3_3G037850 Cucumis sativus L. HOM05D000980 ORTHO05D000649 2.4e-09 66.6 198 33.3
Actinidia07938 Actinidia chinensis HOM05D000980 ORTHO05D000649 3.1e-09 66.2 143 32.9
PGR142G4095 Punica granatum HOM05D000980 ORTHO05D000649 3.1e-09 66.2 139 33.1
MELO3C024581.2 Cucumis melo HOM05D000980 ORTHO05D000649 9.1e-09 64.7 119 35.3
Sed0022825 Sechium edule HOM05D000980 ORTHO05D000649 1.5e-08 63.9 119 36.1
Carub.0004s1772 Capsella rubella HOM05D000980 ORTHO05D000649 5.9e-08 62.0 143 32.2
Thhalv10017726m.g Eutrema salsugineum HOM05D000980 ORTHO05D000649 7.7e-08 61.6 143 34.3
BcaB06g28902 Brassica carinata HOM05D000980 ORTHO05D000649 1.0e-07 61.2 143 32.9
CiPaw.09G019900 Carya illinoinensis HOM05D000980 ORTHO05D000649 1.0e-07 61.2 114 37.7
Prupe.7G111300 Prunus persica HOM05D000980 ORTHO05D000649 1.3e-07 60.8 146 34.2
BcaB01g03866 Brassica carinata HOM05D000980 ORTHO05D000649 2.9e-07 59.7 143 33.6
CSS0004876 Camellia sinensis var. sinensis HOM05D000980 ORTHO05D000649 2.9e-07 59.7 170 29.4
CSS0021498 Camellia sinensis var. sinensis HOM05D000980 ORTHO05D000649 2.9e-07 59.7 170 29.4
CSS0049475 Camellia sinensis var. sinensis HOM05D000980 ORTHO05D000649 2.9e-07 59.7 170 29.4
Gohir.A01G202100 Gossypium hirsutum HOM05D000980 ORTHO05D000649 2.9e-07 59.7 142 33.1
AT2G35980 Arabidopsis thaliana HOM05D000980 ORTHO05D000649 3.8e-07 59.3 143 32.2
A04p27530 Brassica napus HOM05D000980 ORTHO05D000649 3.8e-07 59.3 143 34.3
CiPaw.10G016500 Carya illinoinensis HOM05D000980 ORTHO05D000649 3.8e-07 59.3 114 36.0
Dinv12333 Davidia involucrata HOM05D000980 ORTHO05D000649 5.0e-07 58.9 136 30.9
Gorai.002G235900 Gossypium raimondii HOM05D000980 ORTHO05D000649 5.0e-07 58.9 142 33.1
Thecc.05G102200 Theobroma cacao HOM05D000980 ORTHO05D000649 6.5e-07 58.5 145 31.7
AL4G32080 Arabidopsis lyrata HOM05D000980 ORTHO05D000649 8.5e-07 58.2 143 31.5
CARHR130230 Cardamine hirsuta HOM05D000980 ORTHO05D000649 1.1e-06 57.8 143 31.5
Cfa016683 Carpinus fangiana HOM05D000980 ORTHO05D000649 1.1e-06 57.8 114 32.5
FvH4_2g26071 Fragaria vesca HOM05D000980 ORTHO05D025523 1.1e-06 57.8 144 29.2
FAN24G3336 Fragaria x ananassa HOM05D000980 ORTHO05D025523 1.1e-06 57.8 144 29.2
CiPaw.09G020000 Carya illinoinensis HOM05D000980 ORTHO05D000649 1.4e-06 57.4 114 35.1
CiPaw.10G009200 Carya illinoinensis HOM05D000980 ORTHO05D000649 1.4e-06 57.4 118 32.2
FAN15G2508 Fragaria x ananassa HOM05D000980 ORTHO05D025523 1.4e-06 57.4 144 29.2
Rhsim07G0207200 Rhododendron simsii HOM05D000980 ORTHO05D000649 1.4e-06 57.4 150 33.3
MD12G1035300 Malus domestica HOM05D000980 ORTHO05D000649 3.2e-06 56.2 141 31.9
THA.LOC104823631 Tarenaya hassleriana HOM05D000980 ORTHO05D000649 3.2e-06 56.2 143 34.3
C03p23280 Brassica napus HOM05D000980 ORTHO05D000649 5.5e-06 55.5 136 30.1
BolC3t14728H Brassica oleracea HOM05D000980 ORTHO05D000649 5.5e-06 55.5 136 30.1
MELO3C009529.2 Cucumis melo HOM05D000980 ORTHO05D000649 5.5e-06 55.5 143 30.8
QL07p036978 Quercus lobata HOM05D000980 ORTHO05D000649 7.2e-06 55.1 114 32.5
QL07p037057 Quercus lobata HOM05D000980 ORTHO05D000649 7.2e-06 55.1 141 31.2
TPR.G11092 Trifolium pratense HOM05D000980 ORTHO05D000649 7.2e-06 55.1 139 31.7
BcaC01g05679 Brassica carinata HOM05D000980 ORTHO05D000649 9.4e-06 54.7 116 32.8
Haze_19700 Corylus avellana HOM05D000980 ORTHO05D000649 9.4e-06 54.7 134 28.4
Prupe.7G111500 Prunus persica HOM05D000980 ORTHO05D000649 9.4e-06 54.7 149 33.6


User provided reference genes

Program Settings