Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD14G1025700 Malus domestica HOM05D006284 ORTHO05D007793 7.0e-30 133.3 66 100.0
MD07G1053700 Malus domestica HOM05D006284 ORTHO05D007793 8.0e-26 119.8 66 87.9
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 1.2e-24 115.9 62 88.7
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 9.1e-22 106.3 60 81.7
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 6.6e-20 100.1 62 74.2
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 1.2e-18 95.9 62 71.0
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 1.2e-18 95.9 62 71.0
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 1.6e-18 95.5 62 71.0
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 1.6e-18 95.5 62 69.4
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 2.1e-18 95.1 62 71.0
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 2.1e-18 95.1 62 72.6
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 2.1e-18 95.1 62 69.4
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 2.8e-18 94.7 62 71.0
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 2.8e-18 94.7 62 71.0
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 3.6e-18 94.4 62 69.4
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 3.6e-18 94.4 62 69.4
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 4.7e-18 94.0 62 71.0
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 4.7e-18 94.0 62 69.4
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 4.7e-18 94.0 62 69.4
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 4.7e-18 94.0 62 69.4
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 6.1e-18 93.6 62 67.7
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 6.1e-18 93.6 62 69.4
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 6.1e-18 93.6 62 67.7
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 1.0e-17 92.8 62 69.4
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.0e-17 92.8 62 67.7
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 1.0e-17 92.8 62 69.4
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 1.4e-17 92.4 63 68.3
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 1.8e-17 92.0 62 66.1
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 1.8e-17 92.0 54 75.9
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 1.8e-17 92.0 62 67.7
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 1.8e-17 92.0 62 66.1
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 1.8e-17 92.0 62 67.7
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 2.3e-17 91.7 62 67.7
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 3.0e-17 91.3 62 67.7
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 3.0e-17 91.3 62 64.5
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 4.0e-17 90.9 54 74.1
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 4.0e-17 90.9 54 74.1
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 5.2e-17 90.5 64 67.2
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 5.2e-17 90.5 65 66.2
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 5.2e-17 90.5 54 74.1
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 5.2e-17 90.5 54 74.1
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 5.2e-17 90.5 54 74.1
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 5.2e-17 90.5 62 69.4
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 5.2e-17 90.5 62 67.7
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 5.2e-17 90.5 62 66.1
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 5.2e-17 90.5 62 66.1
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 6.8e-17 90.1 54 72.2
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 6.8e-17 90.1 54 72.2
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 6.8e-17 90.1 54 72.2
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 6.8e-17 90.1 54 72.2
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 6.8e-17 90.1 62 66.1
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 6.8e-17 90.1 62 66.1
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 6.8e-17 90.1 62 62.9
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 8.9e-17 89.7 62 64.5
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 8.9e-17 89.7 62 64.5
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 8.9e-17 89.7 62 67.7
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 8.9e-17 89.7 62 67.7
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 8.9e-17 89.7 54 72.2
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 8.9e-17 89.7 62 64.5
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 1.2e-16 89.4 61 65.6
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 1.2e-16 89.4 61 65.6
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 1.2e-16 89.4 60 66.7
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 1.2e-16 89.4 62 67.7
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 1.2e-16 89.4 62 64.5
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 1.2e-16 89.4 65 64.6
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 1.2e-16 89.4 62 64.5
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 2.0e-16 88.6 62 66.1
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 2.0e-16 88.6 62 62.9
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 2.6e-16 88.2 54 72.2
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 2.6e-16 88.2 54 72.2
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 2.6e-16 88.2 54 72.2
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 2.6e-16 88.2 54 72.2
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 2.6e-16 88.2 54 72.2
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 2.6e-16 88.2 54 72.2
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 2.6e-16 88.2 62 64.5
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 2.6e-16 88.2 62 64.5
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 2.6e-16 88.2 62 64.5
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 2.6e-16 88.2 62 64.5
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 2.6e-16 88.2 63 65.1
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 4.4e-16 87.4 61 63.9
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 4.4e-16 87.4 62 66.1
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 4.4e-16 87.4 62 64.5
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 4.4e-16 87.4 61 63.9
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 5.7e-16 87.0 64 64.1
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 7.5e-16 86.7 62 64.5
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 7.5e-16 86.7 60 66.7
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 9.8e-16 86.3 62 64.5
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 9.8e-16 86.3 54 70.4
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 9.8e-16 86.3 57 66.7
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 1.3e-15 85.9 57 66.7
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 2.2e-15 85.1 61 63.9
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 3.7e-15 84.3 62 61.3
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 3.7e-15 84.3 62 59.7
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 4.9e-15 84.0 59 64.4
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 8.3e-15 83.2 54 68.5
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 2.4e-14 81.6 55 65.5
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 2.4e-14 81.6 64 60.9
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 3.1e-14 81.3 62 56.5
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 7.0e-14 80.1 60 63.3
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 7.0e-14 80.1 61 62.3
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 9.2e-14 79.7 55 69.1
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 9.2e-14 79.7 61 65.6
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 2.3e-12 75.1 53 60.4
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 6.6e-12 73.6 54 59.3
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 1.9e-11 72.0 54 59.3
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 3.6e-10 67.8 84 45.2
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 3.6e-10 67.8 53 54.7
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 4.7e-10 67.4 82 46.3
Cc01_g12610 Coffea canephora HOM05D006284 ORTHO05D007793 5.2e-09 63.9 40 67.5
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 2.6e-08 61.6 53 50.9
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 9.8e-08 59.7 54 50.0
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 1.3e-07 59.3 62 53.2
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.7e-07 58.9 41 65.9
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 2.9e-07 58.2 41 65.9
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 1.4e-06 55.8 59 49.2
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 4.1e-06 54.3 40 65.0


User provided reference genes

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