Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD14G1010200 Malus domestica HOM05D007691 ORTHO05D008758 8.5e-55 216.9 117 100.0
MD12G1012400 Malus domestica HOM05D007691 ORTHO05D008758 4.3e-30 134.8 95 75.8
Prupe.7G016300 Prunus persica HOM05D007691 ORTHO05D008758 4.0e-28 128.3 99 68.7
Potri.013G066600 Populus trichocarpa HOM05D007691 ORTHO05D008758 3.5e-16 88.6 96 59.4
QL07p017243 Quercus lobata HOM05D007691 ORTHO05D008758 2.3e-15 85.9 85 60.0
Cfa017725 Carpinus fangiana HOM05D007691 ORTHO05D008758 3.9e-15 85.1 95 50.5
Dinv25036 Davidia involucrata HOM05D007691 ORTHO05D008758 5.1e-15 84.7 96 51.0
Manes.08G152200 Manihot esculenta HOM05D007691 ORTHO05D008758 1.1e-14 83.6 122 50.8
Sabra13G0058100 Salix brachista HOM05D007691 ORTHO05D008758 1.5e-14 83.2 98 58.2
Lalb_Chr14g0364941 Lupinus albus HOM05D007691 ORTHO05D008758 1.9e-14 82.8 97 49.5
Actinidia06207 Actinidia chinensis HOM05D007691 ORTHO05D008758 4.3e-14 81.6 95 49.5
Haze_20399 Corylus avellana HOM05D007691 ORTHO05D008758 9.5e-14 80.5 95 47.4
Lalb_Chr02g0157501 Lupinus albus HOM05D007691 ORTHO05D008758 1.6e-13 79.7 96 46.9
Ciclev10022756m.g Citrus clementina HOM05D007691 ORTHO05D008758 2.1e-13 79.3 125 44.8
Glyma.19G118700 Glycine max HOM05D007691 ORTHO05D008758 6.2e-13 77.8 88 47.7
vmacro07648 Vaccinium macrocarpon HOM05D007691 ORTHO05D008758 8.1e-13 77.4 88 55.7
arahy.Tifrunner.gnm1.ann1.5EZ2U4 Arachis hypogaea HOM05D007691 ORTHO05D008758 1.1e-12 77.0 103 46.6
arahy.Tifrunner.gnm1.ann1.MY48C3 Arachis hypogaea HOM05D007691 ORTHO05D008758 1.8e-12 76.3 93 48.4
Dinv13794 Davidia involucrata HOM05D007691 ORTHO05D008758 2.3e-12 75.9 90 53.3
Hma1.2p1_0075F.1_g039350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 3.1e-12 75.5 97 45.4
Actinidia03917 Actinidia chinensis HOM05D007691 ORTHO05D008758 8.9e-12 73.9 89 51.7
CSS0005044 Camellia sinensis var. sinensis HOM05D007691 ORTHO05D008758 8.9e-12 73.9 94 47.9
Nn6g32394 Nelumbo nucifera HOM05D007691 ORTHO05D008758 8.9e-12 73.9 94 46.8
arahy.Tifrunner.gnm1.ann1.F64EX1 Arachis hypogaea HOM05D007691 ORTHO05D008758 1.2e-11 73.6 100 45.0
arahy.Tifrunner.gnm1.ann1.K1K8SL Arachis hypogaea HOM05D007691 ORTHO05D008758 1.5e-11 73.2 100 45.0
COL.COLO4_20083 Corchorus olitorius HOM05D007691 ORTHO05D008758 2.0e-11 72.8 101 47.5
Manes.13G143001 Manihot esculenta HOM05D007691 ORTHO05D008758 2.0e-11 72.8 89 51.7
Glyma.19G117800 Glycine max HOM05D007691 ORTHO05D008758 4.4e-11 71.6 94 51.1
Gohir.A11G227700 Gossypium hirsutum HOM05D007691 ORTHO05D008758 4.4e-11 71.6 90 52.2
ClCG10G015920 Citrullus lanatus HOM05D007691 ORTHO05D008758 5.8e-11 71.2 85 49.4
Glyma.03G007400 Glycine max HOM05D007691 ORTHO05D008758 7.5e-11 70.9 87 46.0
Gorai.007G253600 Gossypium raimondii HOM05D007691 ORTHO05D008758 7.5e-11 70.9 90 52.2
Gohir.D11G240200 Gossypium hirsutum HOM05D007691 ORTHO05D008758 9.9e-11 70.5 90 52.2
Duzib128G0235 Durio zibethinus HOM05D007691 ORTHO05D008758 1.3e-10 70.1 123 44.7
Phvul.001G106900 Phaseolus vulgaris HOM05D007691 ORTHO05D008758 1.3e-10 70.1 93 43.0
Glyma.16G035200 Glycine max HOM05D007691 ORTHO05D008758 1.7e-10 69.7 106 49.1
Actinidia37824 Actinidia chinensis HOM05D007691 ORTHO05D008758 2.2e-10 69.3 100 46.0
Lj1g0027070 Lotus japonicus HOM05D007691 ORTHO05D008758 2.2e-10 69.3 86 47.7
Manes.09G136400 Manihot esculenta HOM05D007691 ORTHO05D008758 2.2e-10 69.3 95 48.4
Medtr7g086770 Medicago truncatula HOM05D007691 ORTHO05D008758 2.2e-10 69.3 86 46.5
Thecc.05G240900 Theobroma cacao HOM05D007691 ORTHO05D008758 3.7e-10 68.6 98 48.0
Lj2g0016909 Lotus japonicus HOM05D007691 ORTHO05D008758 6.4e-10 67.8 84 46.4
TPR.G34787 Trifolium pratense HOM05D007691 ORTHO05D008758 1.1e-09 67.0 92 44.6
Eucgr.A02145 Eucalyptus grandis HOM05D007691 ORTHO05D008758 2.4e-09 65.9 97 49.5
Phvul.001G106200 Phaseolus vulgaris HOM05D007691 ORTHO05D008758 3.2e-09 65.5 91 47.3
CsaV3_3G040570 Cucumis sativus L. HOM05D007691 ORTHO05D008758 4.1e-09 65.1 85 49.4
Lalb_Chr21g0317311 Lupinus albus HOM05D007691 ORTHO05D008758 4.1e-09 65.1 101 45.5
TAR633G0734 Trochodendron aralioides HOM05D007691 ORTHO05D008758 4.1e-09 65.1 94 44.7
PGR042G3671 Punica granatum HOM05D026603 ORTHO05D008758 6.0e-08 61.2 85 42.4
Psat1g088640 Pisum sativum HOM05D007691 ORTHO05D008758 7.8e-08 60.8 88 42.0
PGR142G1160 Punica granatum HOM05D007691 ORTHO05D008758 7.8e-08 60.8 108 40.7
PGR142G3022 Punica granatum HOM05D007691 ORTHO05D008758 7.8e-08 60.8 111 45.0
Sed0014810 Sechium edule HOM05D007691 ORTHO05D008758 7.8e-08 60.8 81 46.9
MD14G1010100 Malus domestica HOM05D007691 ORTHO05D008758 1.0e-07 60.5 84 47.6
DCAR_020650 Daucus carota HOM05D007691 ORTHO05D008758 1.3e-07 60.1 95 46.3
Medtr6g027320 Medicago truncatula HOM05D007691 ORTHO05D008758 2.3e-07 59.3 72 41.7
Phvul.001G106300 Phaseolus vulgaris HOM05D017020 ORTHO05D016669 3.9e-07 58.5 93 43.0
TPR.G33917 Trifolium pratense HOM05D007691 ORTHO05D008758 3.9e-07 58.5 86 43.0
TAR623G0909 Trochodendron aralioides HOM05D007691 ORTHO05D008758 1.1e-06 57.0 67 47.8
Lalb_Chr02g0157431 Lupinus albus HOM05D007691 ORTHO05D008758 1.5e-06 56.6 92 37.0
Medtr6g027470 Medicago truncatula HOM05D017020 ORTHO05D016669 1.5e-06 56.6 88 39.8
Sc15g0006900 Simmondsia chinensis HOM05D007691 ORTHO05D008758 1.5e-06 56.6 85 47.1
arahy.Tifrunner.gnm1.ann1.N1UETT Arachis hypogaea HOM05D007691 ORTHO05D008758 1.9e-06 56.2 104 43.3
Hma1.2p1_0636F.1_g193350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 1.9e-06 56.2 48 56.2
Sed0006259 Sechium edule HOM05D007691 ORTHO05D008758 1.9e-06 56.2 87 43.7
arahy.Tifrunner.gnm1.ann1.BJ9957 Arachis hypogaea HOM05D007691 ORTHO05D008758 2.5e-06 55.8 102 43.1
Sabra19G0050800 Salix brachista HOM05D007691 ORTHO05D008758 3.3e-06 55.5 118 38.1
Ah.11g048350 Amaranthus hybridus HOM05D007106 ORTHO05D007770 5.6e-06 54.7 84 42.9
DCAR_013492 Daucus carota HOM05D007691 ORTHO05D008758 5.6e-06 54.7 87 44.8
Lalb_Chr22g0358551 Lupinus albus HOM05D007691 ORTHO05D008758 9.5e-06 53.9 43 60.5
MD12G1012300 Malus domestica HOM05D007691 ORTHO05D008758 9.5e-06 53.9 87 46.0


User provided reference genes

Program Settings