Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD13G1247100 Malus domestica HOM05D007139 ORTHO05D009171 1.1e-75 287.0 185 100.0
RcHm_v2.0_Chr4g0400871 Rosa chinensis HOM05D007139 ORTHO05D009171 2.1e-52 209.5 194 66.0
FvH4_4g07780 Fragaria vesca HOM05D007139 ORTHO05D009171 4.8e-52 208.4 189 65.1
FAN12G3123 Fragaria x ananassa HOM05D007139 ORTHO05D009171 4.8e-52 208.4 189 65.1
FAN22G0146 Fragaria x ananassa HOM05D007139 ORTHO05D009171 3.1e-51 205.7 189 66.1
FAN07G2196 Fragaria x ananassa HOM05D007139 ORTHO05D009171 5.3e-51 204.9 189 74.1
FAN17G0841 Fragaria x ananassa HOM05D007139 ORTHO05D009171 1.0e-46 190.7 189 68.8
CiPaw.08G034800 Carya illinoinensis HOM05D007139 ORTHO05D009171 1.1e-45 187.2 184 73.4
QL11p005114 Quercus lobata HOM05D007139 ORTHO05D009171 1.6e-44 183.3 192 72.9
TWI63G0338 Tripterygium wilfordii HOM05D007139 ORTHO05D009171 4.1e-43 178.7 183 69.4
Cpa.g.c34934.2 Carica papaya HOM05D007139 ORTHO05D009171 3.4e-42 175.6 189 70.4
TAR383G0430 Trochodendron aralioides HOM05D007139 ORTHO05D009171 2.2e-41 172.9 186 73.1
GSVIVG01029235001 Vitis vinifera HOM05D007139 ORTHO05D009171 4.2e-40 168.7 188 66.0
Rhsim01G0002000 Rhododendron simsii HOM05D007139 ORTHO05D009171 5.5e-40 168.3 190 69.5
Gohir.A08G019100 Gossypium hirsutum HOM05D007139 ORTHO05D009171 2.1e-39 166.4 189 68.3
Gorai.004G027200 Gossypium raimondii HOM05D007139 ORTHO05D009171 2.1e-39 166.4 189 69.8
Nn8g40530 Nelumbo nucifera HOM05D007139 ORTHO05D009171 4.6e-39 165.2 184 56.5
Atru.chr7.836 Acer truncatum HOM05D007139 ORTHO05D009171 6.1e-39 164.9 124 73.4
Cfa013405 Carpinus fangiana HOM05D007139 ORTHO05D009171 6.1e-39 164.9 186 71.5
Gohir.D08G029700 Gossypium hirsutum HOM05D007139 ORTHO05D009171 7.9e-39 164.5 189 69.3
Glyma.13G098100 Glycine max HOM05D007139 ORTHO05D009171 2.3e-38 162.9 189 70.4
MELO3C004003.2 Cucumis melo HOM05D007139 ORTHO05D009171 6.7e-38 161.4 188 49.5
Sabra06G0127600 Salix brachista HOM05D007139 ORTHO05D009171 1.5e-37 160.2 199 53.8
Potri.006G165800 Populus trichocarpa HOM05D007139 ORTHO05D009171 2.0e-37 159.8 192 55.7
PGR044G0070 Punica granatum HOM05D007139 ORTHO05D009171 3.3e-37 159.1 190 67.9
Hma1.2p1_1086F.1_g255460 Hydrangea macrophylla HOM05D007139 ORTHO05D009171 4.4e-37 158.7 185 70.8
Hund09039 Selenicereus undatus HOM05D007139 ORTHO05D009171 9.7e-37 157.5 189 68.8
ClCG11G011980 Citrullus lanatus HOM05D007139 ORTHO05D009171 1.7e-36 156.8 193 59.6
Oeu025690.1 Olea europaea HOM05D007139 ORTHO05D009171 6.3e-36 154.8 183 68.3
Eucgr.C02387 Eucalyptus grandis HOM05D007139 ORTHO05D009171 2.0e-34 149.8 137 81.8
CiPaw.07G194300 Carya illinoinensis HOM05D007139 ORTHO05D009171 3.4e-34 149.1 180 52.8
Glyma.17G061600 Glycine max HOM05D007139 ORTHO05D009171 7.7e-34 147.9 183 67.2
Dinv19561 Davidia involucrata HOM05D007139 ORTHO05D009171 1.0e-33 147.5 188 69.1
Sed0022431 Sechium edule HOM05D007139 ORTHO05D009171 1.0e-33 147.5 186 63.4
Aqoxy7G02982 Aquilegia oxysepala HOM05D007139 ORTHO05D009171 2.2e-33 146.4 187 63.1
VMungo1215G0446 Vigna mungo HOM05D007139 ORTHO05D009171 2.2e-33 146.4 145 80.7
Cc06_g13070 Coffea canephora HOM05D007139 ORTHO05D009171 2.9e-33 146.0 187 57.2
MBI14_g08139_MAGBIO Magnolia biondii HOM05D007139 ORTHO05D009171 2.9e-33 146.0 185 64.9
AUR62021317 Chenopodium quinoa HOM05D007139 ORTHO05D009171 3.8e-33 145.6 190 50.0
Psat0s3717g0080 Pisum sativum HOM05D007139 ORTHO05D009171 6.5e-33 144.8 194 46.9
Lalb_Chr12g0199481 Lupinus albus HOM05D007139 ORTHO05D009171 1.4e-32 143.7 185 63.8
AUR62033234 Chenopodium quinoa HOM05D007139 ORTHO05D009171 2.5e-32 142.9 188 48.9
Phvul.003G143600 Phaseolus vulgaris HOM05D007139 ORTHO05D009171 7.2e-32 141.4 190 66.3
PSO170G0255 Papaver somniferum HOM05D007139 ORTHO05D009171 1.2e-31 140.6 198 54.5
SGA_v2.0_scaffold66G22428 Striga asiatica HOM05D007139 ORTHO05D009171 2.1e-31 139.8 189 58.7
Sopen07g006630 Solanum pennellii HOM05D007139 ORTHO05D009171 2.7e-31 139.4 189 65.1
Gorai.009G004000 Gossypium raimondii HOM05D007139 ORTHO05D009171 7.9e-31 137.9 167 65.3
ATR0580G128 Amborella trichopoda HOM05D007139 ORTHO05D009171 1.4e-30 137.1 188 51.1
CsaV3_2G008540 Cucumis sativus L. HOM05D007139 ORTHO05D009171 1.4e-30 137.1 142 77.5
Lj4g0008370 Lotus japonicus HOM05D007139 ORTHO05D009171 1.4e-30 137.1 169 65.1
CDE07G0879 Ceratophyllum demersum HOM05D007139 ORTHO05D009171 1.8e-30 136.7 198 46.5
CAN.G32.11 Capsicum annuum HOM05D007139 ORTHO05D009171 2.3e-30 136.3 188 49.5
Gohir.D05G004250 Gossypium hirsutum HOM05D007139 ORTHO05D009171 3.0e-30 136.0 167 64.1
THA.LOC104813514 Tarenaya hassleriana HOM05D007139 ORTHO05D009171 6.7e-30 134.8 182 48.9
Sc18g0007530 Simmondsia chinensis HOM05D007139 ORTHO05D009171 1.5e-29 133.7 159 70.4
Actinidia02506 Actinidia chinensis HOM05D007139 ORTHO05D009171 2.0e-29 133.3 130 65.4
Thhalv10014766m.g Eutrema salsugineum HOM05D007139 ORTHO05D009171 2.0e-29 133.3 197 61.4
vmacro13142 Vaccinium macrocarpon HOM05D007139 ORTHO05D009171 2.0e-29 133.3 190 61.6
Ah.09g230020 Amaranthus hybridus HOM05D000263 ORTHO05D000213 3.3e-29 132.5 190 46.8
PSO063G4029 Papaver somniferum HOM05D007139 ORTHO05D009171 5.7e-29 131.7 198 52.5
Medtr4g127690 Medicago truncatula HOM05D007139 ORTHO05D009171 6.3e-28 128.3 196 50.0
Aa31LG3G13220 Aethionema arabicum HOM05D007139 ORTHO05D009171 8.2e-28 127.9 127 60.6
Migut.J01499 Erythranthe guttata HOM05D007139 ORTHO05D009171 1.1e-27 127.5 196 50.0
Peaxi162Scf01054g00025 Petunia axillaris HOM05D007139 ORTHO05D009171 1.8e-27 126.7 194 50.5
HPP92_017140 Vanilla planifolia HOM05D007139 ORTHO05D009171 2.4e-27 126.3 130 54.6
CARHR271140 Cardamine hirsuta HOM05D007139 ORTHO05D009171 4.1e-27 125.6 126 61.9
AL8G33320 Arabidopsis lyrata HOM05D007139 ORTHO05D009171 5.3e-27 125.2 126 60.3
AT5G57345 Arabidopsis thaliana HOM05D007139 ORTHO05D009171 5.3e-27 125.2 126 61.9
Nitab4.5_0000055g0210 Nicotiana tabacum HOM05D007139 ORTHO05D009171 1.2e-26 124.0 189 50.3
ECA234G0508 Erigeron canadensis HOM05D007139 ORTHO05D009171 2.6e-26 122.9 198 55.6
HanXRQChr12g0384691 Helianthus annuus HOM05D007139 ORTHO05D009171 4.5e-26 122.1 197 58.4
BcaB05g22339 Brassica carinata HOM05D007139 ORTHO05D009171 7.7e-26 121.3 192 62.5
Haze_21948 Corylus avellana HOM05D007139 ORTHO05D009171 7.7e-26 121.3 102 68.6
Manes.14G157565 Manihot esculenta HOM05D007139 ORTHO05D009171 1.0e-25 120.9 186 49.5
Ciclev10009657m.g Citrus clementina HOM05D007139 ORTHO05D009171 1.3e-25 120.6 183 47.0
A02p08570 Brassica napus HOM05D007139 ORTHO05D009171 2.2e-25 119.8 130 56.9
BraA02t05926Z Brassica rapa HOM05D007139 ORTHO05D009171 2.2e-25 119.8 130 56.9
Thecc.09G178100 Theobroma cacao HOM05D007139 ORTHO05D009171 2.9e-25 119.4 183 47.5
Hund09038 Selenicereus undatus HOM05D007139 ORTHO05D009171 3.8e-25 119.0 173 47.4
Lsat_1_v5_gn_5_85520 Lactuca sativa HOM05D007139 ORTHO05D009171 5.0e-25 118.6 194 56.7
Carub.0008s1786 Capsella rubella HOM05D007139 ORTHO05D009171 6.5e-25 118.2 127 59.1
Nitab4.5_0013636g0010 Nicotiana tabacum HOM05D007139 ORTHO05D009171 6.5e-25 118.2 189 50.8
Ah.14g083710 Amaranthus hybridus HOM05D007139 ORTHO05D009171 8.5e-25 117.9 181 43.1
COL.COLO4_06001 Corchorus olitorius HOM05D007139 ORTHO05D009171 3.2e-24 115.9 186 47.8
Ca_21240_v3 Cicer arietinum L. HOM05D007139 ORTHO05D009171 5.5e-24 115.2 116 62.1
Zm00001eb226320 Zea mays HOM05D007139 ORTHO05D009171 7.2e-24 114.8 136 58.1
Os06g0694800 Oryza sativa ssp. japonica HOM05D007139 ORTHO05D009171 3.6e-23 112.5 157 63.7
CANSAT11G2567 Cannabis sativa HOM05D007139 ORTHO05D009171 4.7e-23 112.1 187 45.5
Lju50A10T16 Lonicera japonica HOM05D007139 ORTHO05D009171 4.7e-23 112.1 123 57.7
Duzib168G1431 Durio zibethinus HOM05D007139 ORTHO05D009171 2.3e-22 109.8 187 46.5
MSTRG.6235 Avicennia marina HOM05D007139 ORTHO05D009171 3.0e-22 109.4 145 48.3
DCAR_020130 Daucus carota HOM05D007139 ORTHO05D009171 3.0e-22 109.4 142 73.9
BcaC03g14161 Brassica carinata HOM05D007139 ORTHO05D009171 6.7e-22 108.2 196 55.6
TPR.G5382 Trifolium pratense HOM05D007139 ORTHO05D009171 1.5e-21 107.1 83 71.1
SEGI_32174 Sequoiadendron giganteum HOM05D007139 ORTHO05D009171 2.2e-20 103.2 149 45.6
A10p14810 Brassica napus HOM05D007139 ORTHO05D009171 5.9e-18 95.1 93 61.3
EL10Ac8g18300 Beta vulgaris HOM05D007139 ORTHO05D009171 1.7e-17 93.6 188 36.7
Duzib150G0167 Durio zibethinus HOM05D007139 ORTHO05D009171 1.2e-15 87.4 185 47.0
Lsat_1_v5_gn_1_19521 Lactuca sativa HOM05D007139 ORTHO05D009171 1.6e-15 87.0 128 66.4
Gohir.A05G003850 Gossypium hirsutum HOM05D007139 ORTHO05D009171 3.0e-14 82.8 107 53.3
arahy.Tifrunner.gnm1.ann1.832R2S Arachis hypogaea HOM05D007139 ORTHO05D009171 5.7e-13 78.6 181 41.4
arahy.Tifrunner.gnm1.ann1.N1BBZF Arachis hypogaea HOM05D007139 ORTHO05D009171 8.6e-09 64.7 170 38.8
Haze_21949 Corylus avellana HOM05D007139 ORTHO05D009171 7.2e-08 61.6 99 68.7
Sp6g19070 Schrenkiella parvula HOM05D007139 ORTHO05D009171 1.0e-06 57.8 197 46.2


User provided reference genes

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