Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD13G1243800 Malus domestica HOM05D001176 ORTHO05D007019 7.5e-297 1023.1 513 100.0
Prupe.1G077200 Prunus persica HOM05D001176 ORTHO05D007019 2.0e-257 892.1 515 87.4
RcHm_v2.0_Chr6g0304421 Rosa chinensis HOM05D001176 ORTHO05D007019 3.0e-237 825.1 514 81.7
FAN27G0701 Fragaria x ananassa HOM05D001176 ORTHO05D007019 7.1e-231 803.9 514 80.0
FAN20G0920 Fragaria x ananassa HOM05D001176 ORTHO05D007019 9.3e-231 803.5 514 79.8
Duzib205G1840 Durio zibethinus HOM05D001176 ORTHO05D007019 2.8e-227 792.0 516 76.7
Thecc.03G318700 Theobroma cacao HOM05D001176 ORTHO05D007019 1.7e-224 782.7 516 76.6
CiPaw.11G075700 Carya illinoinensis HOM05D001176 ORTHO05D007019 5.0e-224 781.2 519 77.1
Atru.chr8.2633 Acer truncatum HOM05D001176 ORTHO05D007019 6.5e-224 780.8 520 76.9
COL.COLO4_11286 Corchorus olitorius HOM05D001176 ORTHO05D007019 1.9e-223 779.2 516 76.2
Gorai.004G178200 Gossypium raimondii HOM05D001176 ORTHO05D007019 1.6e-222 776.2 519 75.3
Gohir.D08G170800 Gossypium hirsutum HOM05D001176 ORTHO05D007019 4.6e-222 774.6 519 75.3
GSVIVG01013198001 Vitis vinifera HOM05D001176 ORTHO05D007019 2.3e-221 772.3 515 75.7
Gohir.A08G149700 Gossypium hirsutum HOM05D001176 ORTHO05D007019 3.9e-221 771.5 516 75.4
CSS0027781 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 6.7e-221 770.8 516 76.2
MSTRG.25741 Avicennia marina HOM05D001176 ORTHO05D007019 5.7e-220 767.7 519 74.6
TWI79G0428 Tripterygium wilfordii HOM05D001176 ORTHO05D007019 4.8e-219 764.6 516 75.6
PGR031G2625 Punica granatum HOM05D001176 ORTHO05D007019 6.3e-219 764.2 525 73.7
QL12p003889 Quercus lobata HOM05D001176 ORTHO05D007019 1.4e-218 763.1 494 78.1
Eucgr.D02557 Eucalyptus grandis HOM05D001176 ORTHO05D007019 1.8e-218 762.7 519 73.6
Rhsim11G0036600 Rhododendron simsii HOM05D001176 ORTHO05D007019 3.1e-218 761.9 515 75.1
Potri.004G236600 Populus trichocarpa HOM05D001176 ORTHO05D007019 1.5e-217 759.6 518 75.3
Haze_02517 Corylus avellana HOM05D001176 ORTHO05D007019 2.0e-217 759.2 554 71.3
Glyma.11G090100 Glycine max HOM05D001176 ORTHO05D007019 2.6e-217 758.8 518 74.3
Gohir.D08G170700 Gossypium hirsutum HOM05D001176 ORTHO05D007019 3.4e-217 758.4 502 75.9
Manes.15G189800 Manihot esculenta HOM05D001176 ORTHO05D007019 3.4e-217 758.4 515 74.8
TAR375G1104 Trochodendron aralioides HOM05D001176 ORTHO05D007019 3.4e-217 758.4 522 74.1
DCAR_001483 Daucus carota HOM05D001176 ORTHO05D007019 1.3e-216 756.5 515 75.0
Lj2g0027044 Lotus japonicus HOM05D001176 ORTHO05D007019 1.7e-216 756.1 518 73.7
Ciclev10011152m.g Citrus clementina HOM05D001176 ORTHO05D007019 2.2e-216 755.7 516 75.2
Psat2g146720 Pisum sativum HOM05D001176 ORTHO05D007019 8.5e-216 753.8 517 74.5
Oeu014108.2 Olea europaea HOM05D001176 ORTHO05D007019 2.5e-215 752.3 520 73.5
Lj9C202G6 Lonicera japonica HOM05D001176 ORTHO05D007019 3.2e-215 751.9 517 74.3
TPR.G8989 Trifolium pratense HOM05D001176 ORTHO05D007019 4.7e-214 748.0 518 73.2
Phvul.002G121100 Phaseolus vulgaris HOM05D001176 ORTHO05D007019 1.4e-213 746.5 518 73.4
SGA_v2.0_scaffold96G29093 Striga asiatica HOM05D001176 ORTHO05D007019 1.4e-213 746.5 515 72.0
Cc08_g05630 Coffea canephora HOM05D001176 ORTHO05D007019 3.0e-213 745.3 520 73.5
Sed0008250 Sechium edule HOM05D001176 ORTHO05D007019 5.1e-213 744.6 515 73.2
Lalb_Chr09g0324961 Lupinus albus HOM05D001176 ORTHO05D007019 1.1e-212 743.4 515 73.0
Medtr5g025410 Medicago truncatula HOM05D001176 ORTHO05D007019 1.1e-212 743.4 518 73.4
ECA240G2428 Erigeron canadensis HOM05D001176 ORTHO05D007019 2.6e-212 742.3 515 74.0
AUR62017508 Chenopodium quinoa HOM05D001176 ORTHO05D007019 5.7e-212 741.1 518 72.4
Sopen08g024070 Solanum pennellii HOM05D001176 ORTHO05D007019 2.2e-211 739.2 520 72.3
EL10Ac5g11241 Beta vulgaris HOM05D001176 ORTHO05D007019 2.8e-211 738.8 518 71.8
Solyc08g075440.4 Solanum lycopersicum HOM05D001176 ORTHO05D007019 1.8e-210 736.1 520 72.1
Lalb_Chr16g0380331 Lupinus albus HOM05D001176 ORTHO05D007019 2.4e-210 735.7 519 72.1
MELO3C010519.2 Cucumis melo HOM05D001176 ORTHO05D007019 3.1e-210 735.3 519 72.6
Nitab4.5_0000030g0410 Nicotiana tabacum HOM05D001176 ORTHO05D007019 4.1e-210 734.9 520 72.3
SalBow4G1488 Salvia bowleyana HOM05D001176 ORTHO05D007019 1.5e-209 733.0 519 72.4
CsaV3_4G027950 Cucumis sativus L. HOM05D001176 ORTHO05D007019 2.0e-209 732.6 519 72.4
HanXRQChr03g0068151 Helianthus annuus HOM05D001176 ORTHO05D007019 2.0e-209 732.6 515 72.4
MBI04_g37458_MAGBIO Magnolia biondii HOM05D001176 ORTHO05D007019 5.9e-209 731.1 519 70.9
Oeu039635.2 Olea europaea HOM05D001176 ORTHO05D007019 1.3e-208 729.9 563 67.0
Cpa.g.sc90.31 Carica papaya HOM05D001176 ORTHO05D007019 3.8e-208 728.4 518 72.4
Sabra01G0180800 Salix brachista HOM05D001176 ORTHO05D007019 5.0e-208 728.0 518 73.2
CAN.G930.8 Capsicum annuum HOM05D001176 ORTHO05D007019 6.5e-208 727.6 520 71.0
Migut.A00530 Erythranthe guttata HOM05D001176 ORTHO05D007019 6.5e-208 727.6 516 71.5
VMungo1215G1610 Vigna mungo HOM05D001176 ORTHO05D007019 1.1e-207 726.9 518 71.4
PGSC0003DMG400001956 Solanum tuberosum HOM05D001176 ORTHO05D007019 1.5e-207 726.5 511 72.4
Nitab4.5_0001333g0050 Nicotiana tabacum HOM05D001176 ORTHO05D007019 1.0e-205 720.3 503 72.8
Ca_25034_v3 Cicer arietinum L. HOM05D001176 ORTHO05D007019 3.0e-205 718.8 501 72.7
Aqoxy7G00899 Aquilegia oxysepala HOM05D001176 ORTHO05D007019 5.2e-205 718.0 519 72.1
Sc21g0000770 Simmondsia chinensis HOM05D001176 ORTHO05D007019 2.0e-204 716.1 520 69.8
PSO675G7478 Papaver somniferum HOM05D001176 ORTHO05D007019 7.4e-204 714.1 521 70.2
ClCG11G016030 Citrullus lanatus HOM05D001176 ORTHO05D007019 1.7e-203 713.0 517 71.2
THA.LOC104798522 Tarenaya hassleriana HOM05D001176 ORTHO05D007019 2.8e-203 712.2 514 71.6
AL1G45850 Arabidopsis lyrata HOM05D001176 ORTHO05D007019 6.3e-203 711.1 514 70.8
Ah.05g167880 Amaranthus hybridus HOM05D001176 ORTHO05D007019 1.1e-202 710.3 547 66.7
PSO732G0580 Papaver somniferum HOM05D001176 ORTHO05D007019 1.4e-202 709.9 521 69.5
AT1G31780 Arabidopsis thaliana HOM05D001176 ORTHO05D007019 3.1e-202 708.8 513 70.8
Carub.0001s3008 Capsella rubella HOM05D001176 ORTHO05D007019 2.0e-201 706.1 513 70.2
Lsat_1_v5_gn_9_124460 Lactuca sativa HOM05D001176 ORTHO05D007019 7.7e-201 704.1 530 69.1
BcaB07g32825 Brassica carinata HOM05D001176 ORTHO05D007019 6.5e-200 701.0 514 69.8
Nn1g09379 Nelumbo nucifera HOM05D001176 ORTHO05D007019 3.2e-199 698.7 501 72.3
Sp1g27470 Schrenkiella parvula HOM05D001176 ORTHO05D007019 6.1e-198 694.5 514 69.3
A09p34570 Brassica napus HOM05D001176 ORTHO05D007019 1.4e-197 693.3 514 69.5
BraA09t38996Z Brassica rapa HOM05D001176 ORTHO05D007019 1.8e-197 693.0 514 69.5
Peaxi162Scf00193g00811 Petunia axillaris HOM05D001176 ORTHO05D007019 5.2e-197 691.4 500 70.6
ATR0665G266 Amborella trichopoda HOM05D001176 ORTHO05D007019 1.5e-196 689.9 521 67.9
unitig_748.g7392 Utricularia gibba HOM05D001176 ORTHO05D007019 1.5e-196 689.9 516 66.3
Aa31LG2G14290 Aethionema arabicum HOM05D001176 ORTHO05D007019 2.0e-196 689.5 511 69.1
BcaC05g27192 Brassica carinata HOM05D001176 ORTHO05D007019 2.0e-196 689.5 514 69.1
BolC5t31821H Brassica oleracea HOM05D001176 ORTHO05D007019 2.0e-196 689.5 514 69.1
CARHR031080 Cardamine hirsuta HOM05D001176 ORTHO05D007019 1.3e-195 686.8 513 68.8
Thhalv10006980m.g Eutrema salsugineum HOM05D001176 ORTHO05D007019 3.7e-195 685.3 515 68.7
C05p30980 Brassica napus HOM05D001176 ORTHO05D007019 6.5e-192 674.5 514 67.9
CDE04G2738 Ceratophyllum demersum HOM05D001176 ORTHO05D007019 7.7e-185 651.0 519 64.7
SEGI_32977 Sequoiadendron giganteum HOM05D001176 ORTHO05D007019 1.0e-181 640.6 529 62.6
AUR62015049 Chenopodium quinoa HOM05D001176 ORTHO05D007019 1.1e-175 620.5 501 64.3
Zm00001eb009310 Zea mays HOM05D001176 ORTHO05D007019 1.2e-172 610.5 513 61.2
Mapoly0009s0222 Marchantia polymorpha HOM05D001176 ORTHO05D007019 6.0e-161 571.6 545 56.1
Actinidia01255 Actinidia chinensis HOM05D001176 ORTHO05D007019 1.2e-156 557.4 377 75.3
AagrBONN_evm.TU.Sc2ySwM_362.2951 Anthoceros agrestis HOM05D001176 ORTHO05D007019 2.7e-153 546.2 539 54.5
Pp3c2_23210 Physcomitrium patens HOM05D001176 ORTHO05D007019 5.1e-152 542.0 545 53.8
FvH4_2g37280 Fragaria vesca HOM05D001176 ORTHO05D007019 1.1e-149 534.3 364 75.8
HPP92_018761 Vanilla planifolia HOM05D001176 ORTHO05D007019 1.5e-143 513.8 424 62.7
FAN15G1703 Fragaria x ananassa HOM05D001176 ORTHO05D007019 2.9e-131 473.0 298 79.9
SMO339G0033 Selaginella moellendorffii HOM05D001176 ORTHO05D007019 2.7e-129 466.5 531 50.3
MD13G1243900 Malus domestica HOM05D001176 ORTHO05D007019 1.1e-125 454.5 244 96.3
MD13G1244000 Malus domestica HOM05D001176 ORTHO05D007019 5.5e-122 442.2 242 90.9
CBR_g61503 Chara braunii HOM05D001176 ORTHO05D007019 1.5e-103 380.9 473 46.3
Dinv41809 Davidia involucrata HOM05D001176 ORTHO05D007019 1.8e-101 374.0 274 71.5
Cre13.g587750 Chlamydomonas reinhardtii HOM05D001176 ORTHO05D007019 7.7e-100 368.6 537 41.3
Cc07_g20650 Coffea canephora HOM05D001176 ORTHO05D007019 2.2e-99 367.1 432 51.6
FAN15G2248 Fragaria x ananassa HOM05D001176 ORTHO05D007019 1.2e-92 344.7 218 80.3
CSS0030107 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 1.5e-90 337.8 232 73.7
Actinidia32787 Actinidia chinensis HOM05D001176 ORTHO05D007019 6.5e-83 312.4 497 42.1
PRCOL_00001869 Prasinoderma coloniale HOM05D001176 ORTHO05D007019 3.0e-80 303.5 537 37.2
MCO03G158 Micromonas commoda HOM05D001176 ORTHO05D007019 8.3e-78 295.4 526 35.6
CSS0004945 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 3.7e-70 270.0 475 39.8
CSS0012136 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 2.1e-57 227.6 425 38.4
Dinv41808 Davidia involucrata HOM05D001176 ORTHO05D007019 3.7e-46 190.3 93 94.6
CDE07G2068 Ceratophyllum demersum HOM05D004834 ORTHO05D006247 2.4e-45 187.6 212 52.4
Glyma.01G154501 Glycine max HOM05D001176 ORTHO05D007019 5.2e-40 169.9 101 82.2
Os03g0225600 Oryza sativa ssp. japonica HOM05D001176 ORTHO05D007019 2.0e-31 141.4 115 60.0
HPP92_018762 Vanilla planifolia HOM05D001176 ORTHO05D007019 3.3e-26 124.0 84 67.9
CBR_g61501 Chara braunii HOM05D001176 ORTHO05D007019 4.0e-24 117.1 64 82.8
CsaV3_4G027980 Cucumis sativus L. HOM05D001176 ORTHO05D007019 1.2e-23 115.5 210 41.0
Glyma.01G154551 Glycine max HOM05D001176 ORTHO05D214389 1.4e-21 108.6 83 65.1
Zm00001eb399610 Zea mays HOM05D001176 ORTHO05D007019 4.0e-16 90.5 149 37.6


User provided reference genes

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