Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 6.8e-54 213.8 111 100.0
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 9.0e-14 80.5 120 52.5
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 3.4e-13 78.6 120 50.8
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 4.5e-13 78.2 120 52.5
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 1.3e-12 76.6 120 50.8
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 2.9e-12 75.5 118 50.0
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 8.5e-12 73.9 120 46.7
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 1.1e-11 73.6 118 49.2
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 1.1e-11 73.6 118 49.2
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 1.9e-11 72.8 118 48.3
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 1.9e-11 72.8 119 47.1
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 1.9e-11 72.8 120 50.0
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 2.5e-11 72.4 118 48.3
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 2.5e-11 72.4 118 49.2
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 2.5e-11 72.4 118 49.2
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 5.5e-11 71.2 115 49.6
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 5.5e-11 71.2 115 49.6
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 5.5e-11 71.2 115 49.6
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 7.2e-11 70.9 118 48.3
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 7.2e-11 70.9 120 46.7
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 9.4e-11 70.5 118 45.8
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 9.4e-11 70.5 118 47.5
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 1.2e-10 70.1 118 45.8
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 1.6e-10 69.7 118 47.5
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 2.7e-10 68.9 120 44.2
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 2.7e-10 68.9 120 47.5
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 6.1e-10 67.8 119 45.4
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 6.1e-10 67.8 118 44.9
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 6.1e-10 67.8 118 45.8
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 7.9e-10 67.4 118 44.9
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 7.9e-10 67.4 118 45.8
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 1.0e-09 67.0 120 44.2
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 1.8e-09 66.2 120 43.3
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 1.8e-09 66.2 120 43.3
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 2.3e-09 65.9 118 43.2
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 2.3e-09 65.9 118 42.4
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 2.3e-09 65.9 117 45.3
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 2.3e-09 65.9 118 44.9
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 2.3e-09 65.9 118 44.1
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 2.3e-09 65.9 118 44.9
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 3.0e-09 65.5 120 43.3
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 3.0e-09 65.5 118 43.2
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 3.0e-09 65.5 118 44.1
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 3.0e-09 65.5 116 45.7
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 3.0e-09 65.5 116 45.7
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 3.0e-09 65.5 119 44.5
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 5.1e-09 64.7 118 43.2
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 5.1e-09 64.7 118 42.4
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 5.1e-09 64.7 120 41.7
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 5.1e-09 64.7 120 41.7
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 5.1e-09 64.7 118 44.1
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 5.1e-09 64.7 118 44.1
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 5.1e-09 64.7 118 44.1
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 5.1e-09 64.7 118 44.1
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 5.1e-09 64.7 118 44.1
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 5.1e-09 64.7 118 44.1
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 5.1e-09 64.7 118 44.1
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 5.1e-09 64.7 118 43.2
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 5.1e-09 64.7 118 44.1
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 6.7e-09 64.3 120 40.8
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 6.7e-09 64.3 120 40.8
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 6.7e-09 64.3 118 43.2
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 6.7e-09 64.3 118 43.2
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 6.7e-09 64.3 118 43.2
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 6.7e-09 64.3 116 42.2
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 6.7e-09 64.3 119 44.5
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 8.8e-09 63.9 118 42.4
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 8.8e-09 63.9 118 43.2
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 8.8e-09 63.9 117 44.4
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 8.8e-09 63.9 118 42.4
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 8.8e-09 63.9 117 42.7
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 1.1e-08 63.5 120 40.8
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 1.1e-08 63.5 120 40.8
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 1.5e-08 63.2 117 47.0
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 1.5e-08 63.2 120 40.8
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 1.5e-08 63.2 120 40.8
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 1.5e-08 63.2 118 44.1
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 1.5e-08 63.2 117 43.6
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.5e-08 63.2 118 42.4
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 1.9e-08 62.8 120 42.5
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 1.9e-08 62.8 118 45.8
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 3.3e-08 62.0 118 43.2
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 3.3e-08 62.0 117 42.7
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 4.3e-08 61.6 118 44.9
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 7.4e-08 60.8 118 44.9
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 7.4e-08 60.8 118 44.1
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 9.7e-08 60.5 111 37.8
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 9.7e-08 60.5 119 42.9
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 9.7e-08 60.5 119 42.9
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 9.7e-08 60.5 117 41.9
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 9.7e-08 60.5 118 44.9
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 9.7e-08 60.5 118 44.9
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 9.7e-08 60.5 108 47.2
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 2.2e-07 59.3 119 42.9
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 2.2e-07 59.3 117 38.5
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 3.7e-07 58.5 118 39.8
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 3.7e-07 58.5 119 42.0
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 3.7e-07 58.5 113 43.4
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 4.8e-07 58.2 119 43.7
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 8.2e-07 57.4 95 43.2
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 8.2e-07 57.4 117 41.0
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 8.2e-07 57.4 118 39.8
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 8.2e-07 57.4 119 42.0
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 1.1e-06 57.0 108 41.7
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 1.4e-06 56.6 108 43.5
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 3.1e-06 55.5 118 35.6
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 4.1e-06 55.1 109 40.4
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 4.1e-06 55.1 119 38.7


User provided reference genes

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