Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD13G1230900 Malus domestica HOM05D005047 ORTHO05D006540 1.3e-72 276.2 129 100.0
Prupe.1G060800 Prunus persica HOM05D005047 ORTHO05D006540 6.5e-56 220.7 113 91.2
CARHR219510 Cardamine hirsuta HOM05D005047 ORTHO05D006540 2.7e-54 215.3 112 84.8
Thecc.04G211900 Theobroma cacao HOM05D005047 ORTHO05D006540 2.7e-54 215.3 109 88.1
Atru.chr4.1794 Acer truncatum HOM05D005047 ORTHO05D006540 1.4e-53 213.0 110 86.4
Eucgr.H00094 Eucalyptus grandis HOM05D005047 ORTHO05D006540 1.4e-53 213.0 110 87.3
RcHm_v2.0_Chr4g0396911 Rosa chinensis HOM05D005047 ORTHO05D006540 1.4e-53 213.0 110 88.2
COL.COLO4_34082 Corchorus olitorius HOM05D005047 ORTHO05D006540 2.3e-53 212.2 110 85.5
GSVIVG01029046001 Vitis vinifera HOM05D005047 ORTHO05D006540 3.0e-53 211.8 110 84.5
Aa31LG9G3930 Aethionema arabicum HOM05D005047 ORTHO05D006540 5.2e-53 211.1 110 85.5
Gohir.A09G202200 Gossypium hirsutum HOM05D005047 ORTHO05D006540 5.2e-53 211.1 110 85.5
Gohir.D09G196200 Gossypium hirsutum HOM05D005047 ORTHO05D006540 5.2e-53 211.1 110 85.5
Gorai.006G219600 Gossypium raimondii HOM05D005047 ORTHO05D006540 5.2e-53 211.1 110 85.5
PGR142G1511 Punica granatum HOM05D005047 ORTHO05D006540 6.7e-53 210.7 110 84.5
AT4G13720 Arabidopsis thaliana HOM05D005047 ORTHO05D006540 1.1e-52 209.9 110 84.5
CANSAT78G0753 Cannabis sativa HOM05D005047 ORTHO05D006540 1.1e-52 209.9 110 85.5
CANSAT78G2209 Cannabis sativa HOM05D005047 ORTHO05D006540 1.1e-52 209.9 110 85.5
Duzib212G0386 Durio zibethinus HOM05D005047 ORTHO05D006540 1.5e-52 209.5 122 78.7
QL06p023224 Quercus lobata HOM05D005047 ORTHO05D006540 2.6e-52 208.8 112 82.1
AL7G42780 Arabidopsis lyrata HOM05D005047 ORTHO05D006540 4.4e-52 208.0 110 83.6
BcaB02g08656 Brassica carinata HOM05D005047 ORTHO05D006540 4.4e-52 208.0 109 84.4
Ciclev10005905m.g Citrus clementina HOM05D005047 ORTHO05D006540 4.4e-52 208.0 108 85.2
Oeu006715.2 Olea europaea HOM05D005047 ORTHO05D006540 5.7e-52 207.6 114 81.6
SalBow3G2150 Salvia bowleyana HOM05D005047 ORTHO05D006540 7.4e-52 207.2 111 84.7
THA.LOC104808728 Tarenaya hassleriana HOM05D005047 ORTHO05D006540 7.4e-52 207.2 107 86.9
Haze_11554 Corylus avellana HOM05D005047 ORTHO05D006540 9.7e-52 206.8 107 86.9
Thhalv10026260m.g Eutrema salsugineum HOM05D005047 ORTHO05D006540 9.7e-52 206.8 109 83.5
Sabra03G0128700 Salix brachista HOM05D005047 ORTHO05D006540 9.7e-52 206.8 112 83.9
Sp7g11500 Schrenkiella parvula HOM05D005047 ORTHO05D006540 9.7e-52 206.8 109 83.5
HanXRQChr01g0022691 Helianthus annuus HOM05D005047 ORTHO05D006540 1.3e-51 206.5 108 87.0
CiPaw.01G126600 Carya illinoinensis HOM05D005047 ORTHO05D006540 1.7e-51 206.1 113 82.3
BcaC02g09395 Brassica carinata HOM05D005047 ORTHO05D006540 2.2e-51 205.7 109 83.5
Cpa.g.sc59.91 Carica papaya HOM05D005047 ORTHO05D006540 2.8e-51 205.3 123 75.6
Lj6A611T47 Lonicera japonica HOM05D005047 ORTHO05D006540 4.8e-51 204.5 110 83.6
arahy.Tifrunner.gnm1.ann1.0X932T Arachis hypogaea HOM05D005047 ORTHO05D006540 6.3e-51 204.1 119 78.2
Carub.0007s2874 Capsella rubella HOM05D005047 ORTHO05D006540 6.3e-51 204.1 108 84.3
Cc03_g07220 Coffea canephora HOM05D005047 ORTHO05D006540 8.2e-51 203.8 110 82.7
AL5G12130 Arabidopsis lyrata HOM05D005047 ORTHO05D006540 1.1e-50 203.4 110 81.8
A04p08470 Brassica napus HOM05D005047 ORTHO05D006540 1.1e-50 203.4 110 83.6
C04p42210 Brassica napus HOM05D005047 ORTHO05D006540 1.1e-50 203.4 110 83.6
BolC4t25799H Brassica oleracea HOM05D005047 ORTHO05D006540 1.1e-50 203.4 110 83.6
BraA04t16537Z Brassica rapa HOM05D005047 ORTHO05D006540 1.1e-50 203.4 110 83.6
Potri.003G175800 Populus trichocarpa HOM05D005047 ORTHO05D006540 1.4e-50 203.0 110 84.5
Hma1.2p1_0903F.1_g235140 Hydrangea macrophylla HOM05D005047 ORTHO05D006540 3.1e-50 201.8 120 77.5
EL10Ac3g06787 Beta vulgaris HOM05D005047 ORTHO05D006540 4.1e-50 201.4 107 86.0
ECA248G2813 Erigeron canadensis HOM05D005047 ORTHO05D006540 5.3e-50 201.1 109 82.6
Psat6g048720 Pisum sativum HOM05D005047 ORTHO05D006540 5.3e-50 201.1 109 82.6
Sc13g0002770 Simmondsia chinensis HOM05D005047 ORTHO05D006540 5.3e-50 201.1 110 80.0
Phvul.007G236950 Phaseolus vulgaris HOM05D005047 ORTHO05D006540 7.0e-50 200.7 113 79.6
Glyma.10G125100 Glycine max HOM05D005047 ORTHO05D006540 9.1e-50 200.3 113 80.5
Potri.001G052400 Populus trichocarpa HOM05D005047 ORTHO05D006540 9.1e-50 200.3 108 83.3
Lalb_Chr01g0010841 Lupinus albus HOM05D005047 ORTHO05D006540 1.2e-49 199.9 125 76.8
CDE04G3429 Ceratophyllum demersum HOM05D005047 ORTHO05D006540 1.6e-49 199.5 121 75.2
Lj6g0004838 Lotus japonicus HOM05D005047 ORTHO05D006540 2.0e-49 199.1 110 80.0
Peaxi162Scf00047g01312 Petunia axillaris HOM05D005047 ORTHO05D006540 2.6e-49 198.7 110 80.9
TPR.G10100 Trifolium pratense HOM05D005047 ORTHO05D006540 2.6e-49 198.7 108 82.4
Dinv38281 Davidia involucrata HOM05D005047 ORTHO05D006540 3.5e-49 198.4 108 82.4
Lsat_1_v5_gn_0_4860 Lactuca sativa HOM05D005047 ORTHO05D006540 3.5e-49 198.4 106 85.8
Ca_11862_v3 Cicer arietinum L. HOM05D005047 ORTHO05D006540 4.5e-49 198.0 108 82.4
Glyma.20G077400 Glycine max HOM05D005047 ORTHO05D006540 5.9e-49 197.6 108 81.5
PSO782G5131 Papaver somniferum HOM05D005047 ORTHO05D006540 5.9e-49 197.6 108 80.6
PSO478G4795 Papaver somniferum HOM05D005047 ORTHO05D006540 7.7e-49 197.2 108 81.5
Medtr1g047390 Medicago truncatula HOM05D005047 ORTHO05D006540 1.0e-48 196.8 108 83.3
CSS0002501 Camellia sinensis var. sinensis HOM05D005047 ORTHO05D006540 1.3e-48 196.4 108 79.6
SGA_v2.0_scaffold2G00831 Striga asiatica HOM05D005047 ORTHO05D006540 1.3e-48 196.4 109 80.7
TWI73G0442 Tripterygium wilfordii HOM05D005047 ORTHO05D006540 1.3e-48 196.4 109 81.7
Nitab4.5_0010267g0010 Nicotiana tabacum HOM05D005047 ORTHO05D006540 2.2e-48 195.7 122 73.8
CAN.G500.97 Capsicum annuum HOM05D005047 ORTHO05D006540 2.9e-48 195.3 110 79.1
Sed0007809 Sechium edule HOM05D005047 ORTHO05D006540 2.9e-48 195.3 108 80.6
Sopen09g034350 Solanum pennellii HOM05D005047 ORTHO05D006540 1.1e-47 193.4 110 78.2
Migut.N00337 Erythranthe guttata HOM05D005047 ORTHO05D006540 1.5e-47 193.0 109 79.8
FAN07G0410 Fragaria x ananassa HOM05D005047 ORTHO05D006540 1.5e-47 193.0 103 85.4
FAN12G1457 Fragaria x ananassa HOM05D005047 ORTHO05D006540 1.9e-47 192.6 103 85.4
Nitab4.5_0010728g0010 Nicotiana tabacum HOM05D005047 ORTHO05D006540 1.9e-47 192.6 126 71.4
CsaV3_3G011290 Cucumis sativus L. HOM05D005047 ORTHO05D006540 3.2e-47 191.8 106 82.1
PGSC0003DMG400029615 Solanum tuberosum HOM05D005047 ORTHO05D006540 3.2e-47 191.8 110 78.2
TAR633G1642 Trochodendron aralioides HOM05D005047 ORTHO05D006540 4.2e-47 191.4 114 77.2
Solyc09g091420.4 Solanum lycopersicum HOM05D005047 ORTHO05D006540 5.5e-47 191.0 110 77.3
Aa31LG9G3940 Aethionema arabicum HOM05D005047 ORTHO05D006540 3.6e-46 188.3 107 79.4
HPP92_015205 Vanilla planifolia HOM05D005047 ORTHO05D006540 8.0e-46 187.2 122 70.5
Nn3g19880 Nelumbo nucifera HOM05D005047 ORTHO05D006540 4.0e-45 184.9 104 78.8
Aqoxy2G03810 Aquilegia oxysepala HOM05D005047 ORTHO05D006540 5.2e-45 184.5 103 80.6
Hund19253 Selenicereus undatus HOM05D005047 ORTHO05D006540 6.7e-45 184.1 102 81.4
vmacro00514 Vaccinium macrocarpon HOM05D005047 ORTHO05D006540 2.0e-44 182.6 101 83.2
Zm00001eb046670 Zea mays HOM05D005047 ORTHO05D006540 3.3e-44 181.8 110 74.5
Rhsim09G0049500 Rhododendron simsii HOM05D005047 ORTHO05D006540 5.7e-44 181.0 102 81.4
Zm00001eb377030 Zea mays HOM05D005047 ORTHO05D006540 7.5e-44 180.6 110 73.6
MBI07_g19553_MAGBIO Magnolia biondii HOM05D005047 ORTHO05D006540 9.7e-44 180.3 133 64.7
arahy.Tifrunner.gnm1.ann1.BK86JE Arachis hypogaea HOM05D005047 ORTHO05D006540 1.3e-43 179.9 102 81.4
unitig_749.g13975 Utricularia gibba HOM05D005047 ORTHO05D006540 1.3e-43 179.9 109 74.3
VMungo0720G0344 Vigna mungo HOM05D005047 ORTHO05D006540 2.2e-43 179.1 103 78.6
AUR62032663 Chenopodium quinoa HOM05D005047 ORTHO05D006540 2.8e-43 178.7 100 84.0
Manes.03G152700 Manihot esculenta HOM05D005047 ORTHO05D006540 2.8e-43 178.7 108 75.9
Manes.15G048800 Manihot esculenta HOM05D005047 ORTHO05D006540 3.7e-43 178.3 110 72.7
Os10g0457500 Oryza sativa ssp. japonica HOM05D005047 ORTHO05D006540 3.7e-43 178.3 110 71.8
Ah.13g075240 Amaranthus hybridus HOM05D005047 ORTHO05D006540 1.8e-42 176.0 103 75.7
ClCG05G003600 Citrullus lanatus HOM05D005047 ORTHO05D006540 1.2e-41 173.3 101 78.2
SMO367G0232 Selaginella moellendorffii HOM05D005047 ORTHO05D006540 3.5e-41 171.8 114 71.9
Carub.0007s2873 Capsella rubella HOM05D005047 ORTHO05D006540 7.7e-41 170.6 92 82.6
Mapoly0026s0018 Marchantia polymorpha HOM05D005047 ORTHO05D006540 1.7e-40 169.5 105 74.3
Dinv29555 Davidia involucrata HOM05D005047 ORTHO05D006540 1.1e-39 166.8 119 69.7
ATR0088G035 Amborella trichopoda HOM05D005047 ORTHO05D006540 5.5e-39 164.5 105 71.4
Actinidia37393 Actinidia chinensis HOM05D005047 ORTHO05D006540 8.0e-38 160.6 112 68.8
TWI09G0343 Tripterygium wilfordii HOM05D005047 ORTHO05D006540 7.5e-36 154.1 100 72.0
Zm00001eb177140 Zea mays HOM05D005047 ORTHO05D006540 9.8e-36 153.7 99 70.7
AUR62035305 Chenopodium quinoa HOM05D005047 ORTHO05D006540 2.2e-35 152.5 163 51.5
Pp3c16_19640 Physcomitrium patens HOM05D005047 ORTHO05D006540 2.8e-35 152.1 117 63.2
AagrBONN_evm.TU.Sc2ySwM_344.3277 Anthoceros agrestis HOM05D005047 ORTHO05D006540 3.7e-35 151.8 117 62.4
MCO04G006 Micromonas commoda HOM05D005047 ORTHO05D006540 3.1e-34 148.7 93 71.0
Cre02.g095089 Chlamydomonas reinhardtii HOM05D005047 ORTHO05D006540 9.1e-34 147.1 99 64.6
Zm00001eb102100 Zea mays HOM05D005047 ORTHO05D006540 1.3e-32 143.3 110 62.7
PRCOL_00006994 Prasinoderma coloniale HOM05D005047 ORTHO05D006540 3.2e-31 138.7 100 62.0
Zm00001eb086240 Zea mays HOM05D005047 ORTHO05D006540 1.2e-30 136.7 76 77.6
Zm00001eb180620 Zea mays HOM05D005047 ORTHO05D006540 2.3e-29 132.5 84 70.2
Zm00001eb425490 Zea mays HOM05D005047 ORTHO05D006540 4.4e-28 128.3 74 74.3
FAN17G1156 Fragaria x ananassa HOM05D005047 ORTHO05D006540 1.3e-27 126.7 68 83.8
SHI24117 Sapria himalayana HOM05D005047 ORTHO05D006540 3.7e-27 125.2 122 49.2
Cfa024488 Carpinus fangiana HOM05D005047 ORTHO05D006540 9.5e-23 110.5 98 51.0
Cre13.g568950 Chlamydomonas reinhardtii HOM05D005047 ORTHO05D006540 3.4e-20 102.1 102 48.0
Sed0007961 Sechium edule HOM05D005047 ORTHO05D006540 2.9e-19 99.0 120 49.2
SEGI_09208 Sequoiadendron giganteum HOM05D005047 ORTHO05D006540 3.2e-18 95.5 64 68.8
Sabra01G0036900 Salix brachista HOM05D005047 ORTHO05D006540 1.6e-17 93.2 48 83.3
CBR_g49288 Chara braunii HOM05D005047 ORTHO05D006540 5.6e-15 84.7 54 72.2
Medtr1g047400 Medicago truncatula HOM05D005047 ORTHO05D006540 3.6e-14 82.0 60 66.7
arahy.Tifrunner.gnm1.ann1.FRRS2Q Arachis hypogaea HOM05D005047 ORTHO05D084578 6.4e-11 71.2 68 52.9
EL10Ac7g17560 Beta vulgaris HOM05D005047 ORTHO05D006373 1.6e-09 66.6 37 81.1
EL10Ac6g14438 Beta vulgaris HOM05D005047 ORTHO05D006540 7.8e-09 64.3 37 78.4


User provided reference genes

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