Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD13G1185300 Malus domestica HOM05D008368 ORTHO05D010489 3.1e-18 94.7 47 100.0
Prupe.1G152900 Prunus persica HOM05D008368 ORTHO05D010489 7.5e-12 73.6 40 90.0
FvH4_4g14770 Fragaria vesca HOM05D008368 ORTHO05D010489 9.1e-10 66.6 44 75.0
FAN07G1534 Fragaria x ananassa HOM05D008368 ORTHO05D010489 9.1e-10 66.6 44 75.0
FAN17G1872 Fragaria x ananassa HOM05D008368 ORTHO05D010489 9.1e-10 66.6 44 75.0
CiPaw.01G161200 Carya illinoinensis HOM05D008368 ORTHO05D010489 1.2e-09 66.2 42 71.4
FAN22G0200 Fragaria x ananassa HOM05D008368 ORTHO05D010489 4.5e-09 64.3 44 70.5
CSS0036726 Camellia sinensis var. sinensis HOM05D008368 ORTHO05D010489 5.9e-09 63.9 51 66.7
Actinidia08510 Actinidia chinensis HOM05D008368 ORTHO05D010489 1.0e-08 63.2 35 85.7
Cc03_g03240 Coffea canephora HOM05D008368 ORTHO05D010489 1.0e-08 63.2 32 93.8
Sc13g0004110 Simmondsia chinensis HOM05D008368 ORTHO05D010489 1.0e-08 63.2 43 69.8
AUR62038060 Chenopodium quinoa HOM05D008368 ORTHO05D010489 1.7e-08 62.4 36 80.6
AUR62038186 Chenopodium quinoa HOM05D008368 ORTHO05D010489 1.7e-08 62.4 36 80.6
vmacro15316 Vaccinium macrocarpon HOM05D008368 ORTHO05D010489 2.2e-08 62.0 34 85.3
Zm00001eb353800 Zea mays HOM05D038576 ORTHO05D010489 3.8e-08 61.2 51 56.9
Os05g0532800 Oryza sativa ssp. japonica HOM05D038576 ORTHO05D010489 5.0e-08 60.8 41 63.4
RcHm_v2.0_Chr0c32g0501461 Rosa chinensis HOM05D008368 ORTHO05D010489 5.0e-08 60.8 40 75.0
RcHm_v2.0_Chr0c32g0501651 Rosa chinensis HOM05D008368 ORTHO05D010489 5.0e-08 60.8 40 75.0
Glyma.13G207400 Glycine max HOM05D008368 ORTHO05D010489 8.5e-08 60.1 44 63.6
THA.LOC104818801 Tarenaya hassleriana HOM05D008368 ORTHO05D010489 1.5e-07 59.3 32 84.4
EL10Ac3g06405 Beta vulgaris HOM05D008368 ORTHO05D010489 1.9e-07 58.9 40 65.0
EL10Ac3g06406 Beta vulgaris HOM05D008368 ORTHO05D010489 1.9e-07 58.9 40 65.0
Nn4g26217 Nelumbo nucifera HOM05D007833 ORTHO05D009855 1.9e-07 58.9 40 62.5
Ah.13g074090 Amaranthus hybridus HOM05D008368 ORTHO05D010489 3.2e-07 58.2 36 72.2
unitig_32.g10803 Utricularia gibba HOM05D008368 ORTHO05D010489 4.2e-07 57.8 36 75.0
Lsat_1_v5_gn_7_68141 Lactuca sativa HOM05D008368 ORTHO05D010489 5.5e-07 57.4 32 78.1
arahy.Tifrunner.gnm1.ann1.121ATL Arachis hypogaea HOM05D008368 ORTHO05D010489 7.2e-07 57.0 32 75.0
arahy.Tifrunner.gnm1.ann1.IPV0IY Arachis hypogaea HOM05D008368 ORTHO05D010489 7.2e-07 57.0 32 75.0
SalBow2G2001 Salvia bowleyana HOM05D008368 ORTHO05D010489 7.2e-07 57.0 33 75.8
MELO3C006556.2 Cucumis melo HOM05D008368 ORTHO05D010489 9.4e-07 56.6 40 62.5
CsaV3_3G013620 Cucumis sativus L. HOM05D008368 ORTHO05D010489 9.4e-07 56.6 40 65.0
Potri.008G203800 Populus trichocarpa HOM05D008368 ORTHO05D010489 9.4e-07 56.6 32 78.1
Cc01_g19620 Coffea canephora HOM05D007833 ORTHO05D009855 1.2e-06 56.2 45 55.6
Phvul.006G152200 Phaseolus vulgaris HOM05D008368 ORTHO05D010489 1.2e-06 56.2 43 60.5
Sed0011273 Sechium edule HOM05D008368 ORTHO05D010489 1.6e-06 55.8 44 61.4
TAR365G0564 Trochodendron aralioides HOM05D007833 ORTHO05D009855 1.6e-06 55.8 40 57.5
TPR.G30686 Trifolium pratense HOM05D008368 ORTHO05D010489 2.7e-06 55.1 33 66.7
TPR.G40572 Trifolium pratense HOM05D008368 ORTHO05D010489 2.7e-06 55.1 33 66.7
Ca_00633_v3 Cicer arietinum L. HOM05D008368 ORTHO05D010489 3.6e-06 54.7 32 68.8
Medtr2g022540 Medicago truncatula HOM05D008368 ORTHO05D010489 3.6e-06 54.7 32 71.9
AL6G30580 Arabidopsis lyrata HOM05D008368 ORTHO05D010489 6.1e-06 53.9 35 68.6
AT5G19151 Arabidopsis thaliana HOM05D008368 ORTHO05D010489 6.1e-06 53.9 35 68.6
Carub.0006s1749 Capsella rubella HOM05D008368 ORTHO05D010489 6.1e-06 53.9 35 68.6
Thhalv10016117m.g Eutrema salsugineum HOM05D008368 ORTHO05D010489 6.1e-06 53.9 35 68.6
Psat1g182840 Pisum sativum HOM05D008368 ORTHO05D010489 6.1e-06 53.9 33 66.7
Aqoxy6G00608 Aquilegia oxysepala HOM05D007833 ORTHO05D009855 8.0e-06 53.5 40 55.0
ClCG05G005370 Citrullus lanatus HOM05D008368 ORTHO05D010489 8.0e-06 53.5 44 59.1
MBI04_g33966_MAGBIO Magnolia biondii HOM05D007833 ORTHO05D009855 8.0e-06 53.5 41 51.2
Nn1g02183 Nelumbo nucifera HOM05D007833 ORTHO05D009855 8.0e-06 53.5 41 53.7
Thecc.04G224200 Theobroma cacao HOM05D008368 ORTHO05D010489 8.0e-06 53.5 36 63.9


User provided reference genes

Program Settings