Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 1.7e-45 185.7 97 100.0
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 6.4e-40 167.2 97 90.7
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 1.2e-38 162.9 97 85.6
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 1.5e-33 146.0 94 78.7
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.5e-33 146.0 94 78.7
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 2.6e-33 145.2 97 77.3
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 3.4e-33 144.8 94 75.5
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 9.9e-33 143.3 94 76.6
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.3e-32 142.9 94 78.7
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 3.8e-32 141.4 94 77.7
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 3.2e-31 138.3 91 73.6
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 7.1e-31 137.1 97 73.2
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 2.7e-30 135.2 95 70.5
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 1.8e-29 132.5 91 74.7
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 2.3e-29 132.1 91 70.3
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 3.0e-29 131.7 91 70.3
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 5.1e-29 131.0 91 70.3
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 8.7e-29 130.2 91 78.0
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 2.5e-28 128.6 95 68.4
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 3.3e-28 128.3 95 68.4
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 3.3e-28 128.3 91 68.1
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 3.3e-28 128.3 95 71.6
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 5.6e-28 127.5 91 68.1
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 5.6e-28 127.5 92 70.7
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 1.3e-27 126.3 91 71.4
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 2.1e-27 125.6 91 69.2
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 2.8e-27 125.2 97 68.0
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 4.8e-27 124.4 91 70.3
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 4.8e-27 124.4 91 65.9
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 6.2e-27 124.0 94 67.0
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 8.1e-27 123.6 93 68.8
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 1.1e-26 123.2 95 67.4
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 2.4e-26 122.1 91 71.4
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 3.1e-26 121.7 89 70.8
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 3.1e-26 121.7 82 72.0
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 5.3e-26 120.9 83 73.5
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 9.0e-26 120.2 94 64.9
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 9.0e-26 120.2 93 63.4
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 9.0e-26 120.2 92 64.1
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.5e-25 119.4 93 68.8
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 1.5e-25 119.4 93 68.8
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 1.5e-25 119.4 95 65.3
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 2.0e-25 119.0 91 65.9
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 2.6e-25 118.6 95 63.2
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 2.6e-25 118.6 93 66.7
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 5.8e-25 117.5 90 66.7
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 5.8e-25 117.5 95 66.3
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 5.8e-25 117.5 89 68.5
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 7.6e-25 117.1 82 69.5
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 9.9e-25 116.7 80 67.5
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 9.9e-25 116.7 89 68.5
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 9.9e-25 116.7 95 66.3
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 1.3e-24 116.3 90 66.7
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 1.3e-24 116.3 80 67.5
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 1.3e-24 116.3 90 66.7
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 1.3e-24 116.3 93 65.6
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 2.9e-24 115.2 93 66.7
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 6.4e-24 114.0 92 65.2
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 6.4e-24 114.0 96 64.6
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 6.4e-24 114.0 95 64.2
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 1.9e-23 112.5 93 61.3
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 4.2e-23 111.3 93 61.3
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 5.5e-23 110.9 93 60.2
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 9.3e-23 110.2 72 73.6
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 9.3e-23 110.2 92 63.0
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 1.2e-22 109.8 92 63.0
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 1.2e-22 109.8 92 63.0
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 1.2e-22 109.8 92 63.0
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 1.6e-22 109.4 89 61.8
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 1.6e-22 109.4 89 62.9
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 2.7e-22 108.6 91 58.2
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 3.5e-22 108.2 89 60.7
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 4.6e-22 107.8 71 71.8
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 1.8e-21 105.9 73 72.6
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 5.1e-21 104.4 93 59.1
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 6.7e-21 104.0 98 61.2
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 6.7e-21 104.0 69 71.0
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 5.6e-20 100.9 109 54.1
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 5.6e-20 100.9 72 68.1
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 1.3e-19 99.8 95 61.1
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 2.1e-19 99.0 65 70.8
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 3.7e-19 98.2 49 89.8
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 4.0e-18 94.7 77 64.9
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 2.5e-15 85.5 49 85.7
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 7.1e-15 84.0 81 55.6
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 1.2e-14 83.2 83 48.2
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 8.7e-13 77.0 50 70.0
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 3.1e-10 68.6 55 61.8
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 5.3e-10 67.8 51 64.7
Actinidia00065 Actinidia chinensis HOM05D007734 ORTHO05D009807 3.4e-09 65.1 95 43.2
BcaB08g36639 Brassica carinata HOM05D007734 ORTHO05D009807 1.4e-07 59.7 41 68.3
A10p20780 Brassica napus HOM05D007734 ORTHO05D009807 3.6e-06 55.1 46 65.2


User provided reference genes

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