Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD13G1134400 Malus domestica HOM05D007261 ORTHO05D009163 3.3e-136 488.4 255 100.0
MD16G1145000 Malus domestica HOM05D007261 ORTHO05D009163 1.1e-131 473.4 255 94.9
RcHm_v2.0_Chr4g0428371 Rosa chinensis HOM05D007261 ORTHO05D009163 8.2e-119 430.6 260 85.4
Prupe.1G211100 Prunus persica HOM05D007261 ORTHO05D009163 1.2e-117 426.8 258 86.4
FvH4_4g22120 Fragaria vesca HOM05D007261 ORTHO05D009163 2.6e-117 425.6 260 84.2
FAN17G2458 Fragaria x ananassa HOM05D007261 ORTHO05D009163 5.9e-117 424.5 260 84.2
FAN12G3746 Fragaria x ananassa HOM05D007261 ORTHO05D009163 7.7e-117 424.1 260 84.2
FAN07G0598 Fragaria x ananassa HOM05D007261 ORTHO05D009163 1.7e-116 422.9 260 84.2
Manes.09G172600 Manihot esculenta HOM05D007261 ORTHO05D009163 1.2e-98 363.6 247 73.7
Dinv04437 Davidia involucrata HOM05D007261 ORTHO05D009163 2.7e-98 362.5 236 76.3
Cpa.g.sc38.54 Carica papaya HOM05D007261 ORTHO05D009163 1.0e-97 360.5 253 70.4
Potri.001G070800 Populus trichocarpa HOM05D007261 ORTHO05D009163 8.8e-97 357.5 250 73.2
TWI18G1332 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 2.0e-96 356.3 243 72.0
PGR119G1620 Punica granatum HOM05D007261 ORTHO05D009163 1.3e-95 353.6 254 70.1
Hma1.2p1_0738F.1_g210990 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 2.2e-95 352.8 244 70.1
Sabra01G0049700 Salix brachista HOM05D007261 ORTHO05D009163 2.2e-95 352.8 231 73.2
Ciclev10029098m.g Citrus clementina HOM05D007261 ORTHO05D009163 1.1e-94 350.5 257 72.0
QL03p048277 Quercus lobata HOM05D007261 ORTHO05D009163 1.1e-94 350.5 253 71.1
Thecc.01G239300 Theobroma cacao HOM05D007261 ORTHO05D009163 1.8e-94 349.7 248 72.2
CsaV3_3G043490 Cucumis sativus L. HOM05D007261 ORTHO05D009163 2.4e-94 349.4 252 71.8
Cfa009475 Carpinus fangiana HOM05D007261 ORTHO05D009163 3.1e-94 349.0 263 68.8
Duzib264G0686 Durio zibethinus HOM05D007261 ORTHO05D009163 2.0e-93 346.3 264 69.3
TWI36G0866 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 2.0e-93 346.3 237 72.6
Aqoxy5G04229 Aquilegia oxysepala HOM05D007261 ORTHO05D009163 2.6e-93 345.9 245 69.0
Hund12712 Selenicereus undatus HOM05D007261 ORTHO05D009163 2.6e-93 345.9 253 70.8
MELO3C026753.2 Cucumis melo HOM05D007261 ORTHO05D009163 5.9e-93 344.7 255 69.8
AUR62003485 Chenopodium quinoa HOM05D007261 ORTHO05D009163 7.7e-93 344.4 262 68.3
GSVIVG01001121001 Vitis vinifera HOM05D007261 ORTHO05D009163 7.7e-93 344.4 241 74.7
Eucgr.J01661 Eucalyptus grandis HOM05D007261 ORTHO05D009163 1.0e-92 344.0 247 69.6
Gohir.D11G063500 Gossypium hirsutum HOM05D007261 ORTHO05D009163 3.8e-92 342.0 229 73.8
Gorai.007G068700 Gossypium raimondii HOM05D007261 ORTHO05D009163 6.5e-92 341.3 229 73.4
Gohir.A11G059400 Gossypium hirsutum HOM05D007261 ORTHO05D009163 8.5e-92 340.9 229 73.4
ClCG10G013090 Citrullus lanatus HOM05D007261 ORTHO05D009163 1.5e-91 340.1 256 69.9
Sed0025955 Sechium edule HOM05D007261 ORTHO05D009163 1.9e-91 339.7 255 68.2
Atru.chr12.1480 Acer truncatum HOM05D007261 ORTHO05D009163 4.2e-91 338.6 227 72.2
AUR62017794 Chenopodium quinoa HOM05D007261 ORTHO05D009163 4.2e-91 338.6 257 68.5
Cc11_g14850 Coffea canephora HOM05D007261 ORTHO05D009163 7.2e-91 337.8 259 67.2
Ah.03g147240 Amaranthus hybridus HOM05D007261 ORTHO05D009163 1.6e-90 336.7 261 68.6
Nn4g22065 Nelumbo nucifera HOM05D007261 ORTHO05D009163 1.6e-90 336.7 255 68.2
Nitab4.5_0005286g0010 Nicotiana tabacum HOM05D007261 ORTHO05D009163 8.0e-90 334.3 238 69.3
Rhsim12G0015700 Rhododendron simsii HOM05D007261 ORTHO05D009163 8.0e-90 334.3 256 69.1
vmacro01006 Vaccinium macrocarpon HOM05D007261 ORTHO05D009163 2.3e-89 332.8 255 66.7
CANSAT01G0240 Cannabis sativa HOM05D007261 ORTHO05D009163 4.0e-89 332.0 252 68.7
arahy.Tifrunner.gnm1.ann1.EWZS38 Arachis hypogaea HOM05D007261 ORTHO05D009163 6.8e-89 331.3 239 67.8
arahy.Tifrunner.gnm1.ann1.X3R9N8 Arachis hypogaea HOM05D007261 ORTHO05D009163 6.8e-89 331.3 239 67.8
Solyc11g040130.2 Solanum lycopersicum HOM05D007261 ORTHO05D009163 8.8e-89 330.9 239 69.0
PGSC0003DMG400002189 Solanum tuberosum HOM05D007261 ORTHO05D009163 8.8e-89 330.9 239 69.5
Sopen11g017340 Solanum pennellii HOM05D007261 ORTHO05D009163 1.5e-88 330.1 239 68.6
TAR629G2200 Trochodendron aralioides HOM05D007261 ORTHO05D009163 2.6e-88 329.3 249 69.5
Peaxi162Scf01167g00120 Petunia axillaris HOM05D007261 ORTHO05D009163 4.4e-88 328.6 241 67.2
EL10Ac6g15388 Beta vulgaris HOM05D007261 ORTHO05D009163 5.7e-88 328.2 264 66.7
CSS0010700 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 9.7e-88 327.4 242 69.8
CSS0041929 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 4.8e-87 325.1 242 69.4
CAN.G624.13 Capsicum annuum HOM05D007261 ORTHO05D009163 4.8e-87 325.1 253 66.0
AL1G52610 Arabidopsis lyrata HOM05D007261 ORTHO05D009163 6.3e-87 324.7 246 66.7
AT1G44960 Arabidopsis thaliana HOM05D007261 ORTHO05D009163 6.3e-87 324.7 244 67.2
Oeu021934.1 Olea europaea HOM05D007261 ORTHO05D009163 6.3e-87 324.7 259 66.4
Carub.0001s3543 Capsella rubella HOM05D007261 ORTHO05D009163 1.2e-85 320.5 242 67.8
SalBow2G2703 Salvia bowleyana HOM05D007261 ORTHO05D009163 3.5e-85 318.9 255 66.3
Aa31LG7G10040 Aethionema arabicum HOM05D007261 ORTHO05D009163 4.5e-85 318.5 240 64.6
THA.LOC104801410 Tarenaya hassleriana HOM05D007261 ORTHO05D009163 7.7e-85 317.8 252 63.1
Ca_04086_v3 Cicer arietinum L. HOM05D007261 ORTHO05D009163 1.3e-84 317.0 246 64.2
PSO017G6922 Papaver somniferum HOM05D007261 ORTHO05D009163 2.2e-84 316.2 220 71.8
PSO478G2703 Papaver somniferum HOM05D007261 ORTHO05D009163 2.2e-84 316.2 220 70.9
CARHR036160 Cardamine hirsuta HOM05D007261 ORTHO05D009163 6.5e-84 314.7 250 62.0
Lj1g0023925 Lotus japonicus HOM05D007261 ORTHO05D009163 8.5e-84 314.3 233 66.5
Psat3g206640 Pisum sativum HOM05D007261 ORTHO05D009163 1.9e-83 313.2 247 63.6
Lj3A1078G18 Lonicera japonica HOM05D007261 ORTHO05D009163 4.2e-83 312.0 199 75.9
BolC6t35245H Brassica oleracea HOM05D007261 ORTHO05D009163 7.2e-83 311.2 245 64.9
Glyma.18G298600 Glycine max HOM05D007261 ORTHO05D009163 9.4e-83 310.8 242 63.2
HanXRQChr06g0175371 Helianthus annuus HOM05D007261 ORTHO05D009163 9.4e-83 310.8 201 77.1
BcaB07g33898 Brassica carinata HOM05D007261 ORTHO05D009163 1.2e-82 310.5 243 63.4
Thhalv10011722m.g Eutrema salsugineum HOM05D007261 ORTHO05D009163 1.6e-82 310.1 246 63.4
BraA10t42964Z Brassica rapa HOM05D007261 ORTHO05D009163 2.1e-82 309.7 245 63.7
A10p07140 Brassica napus HOM05D007261 ORTHO05D009163 2.7e-82 309.3 245 63.7
Glyma.08G363400 Glycine max HOM05D007261 ORTHO05D009163 2.7e-82 309.3 242 62.8
C06p01120 Brassica napus HOM05D007261 ORTHO05D009163 3.6e-82 308.9 245 64.5
Lalb_Chr04g0257321 Lupinus albus HOM05D007261 ORTHO05D009163 3.6e-82 308.9 230 65.2
Migut.K01136 Erythranthe guttata HOM05D007261 ORTHO05D009163 6.1e-82 308.1 250 66.0
Sc17g0001500 Simmondsia chinensis HOM05D007261 ORTHO05D009163 8.0e-82 307.8 200 73.5
ATR0582G128 Amborella trichopoda HOM05D007261 ORTHO05D009163 1.0e-81 307.4 250 60.0
Phvul.008G004000 Phaseolus vulgaris HOM05D007261 ORTHO05D009163 1.0e-81 307.4 239 62.8
Medtr7g006790 Medicago truncatula HOM05D007261 ORTHO05D009163 3.0e-81 305.8 255 61.2
Medtr7g006800 Medicago truncatula HOM05D007261 ORTHO05D009163 3.0e-81 305.8 255 61.2
Sp1g33800 Schrenkiella parvula HOM05D007261 ORTHO05D009163 3.0e-81 305.8 223 66.8
TPR.G9720 Trifolium pratense HOM05D007261 ORTHO05D009163 5.2e-81 305.1 226 66.8
CDE05G0176 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 6.8e-81 304.7 246 63.8
Lsat_1_v5_gn_3_33201 Lactuca sativa HOM05D007261 ORTHO05D009163 2.6e-80 302.8 221 68.8
HPP92_020118 Vanilla planifolia HOM05D007261 ORTHO05D009163 2.6e-80 302.8 249 63.5
ECA246G1741 Erigeron canadensis HOM05D007261 ORTHO05D009163 5.7e-80 301.6 207 70.5
Haze_12532 Corylus avellana HOM05D007261 ORTHO05D009163 2.0e-77 293.1 395 44.3
unitig_26.g10437 Utricularia gibba HOM05D000361 ORTHO05D007482 2.3e-76 289.7 228 66.7
VMungo1383G1401 Vigna mungo HOM05D007261 ORTHO05D009163 9.5e-75 284.3 223 62.3
Os11g0537300 Oryza sativa ssp. japonica HOM05D007261 ORTHO05D009163 1.0e-73 280.8 247 57.5
CiPaw.05G097700 Carya illinoinensis HOM05D007261 ORTHO05D009163 1.2e-72 277.3 248 60.5
Zm00001eb197910 Zea mays HOM05D007261 ORTHO05D009163 2.6e-72 276.2 242 60.3
SEGI_21849 Sequoiadendron giganteum HOM05D007261 ORTHO05D009163 1.2e-64 250.8 181 67.4
Mapoly0073s0041 Marchantia polymorpha HOM05D007261 ORTHO05D009163 1.2e-61 240.7 216 52.8
AagrBONN_evm.TU.Sc2ySwM_228.5286 Anthoceros agrestis HOM05D007261 ORTHO05D009163 3.3e-59 232.6 205 56.1
Pp3c19_21680 Physcomitrium patens HOM05D007261 ORTHO05D009163 4.3e-59 232.3 234 54.3
SMO351G0136 Selaginella moellendorffii HOM05D007261 ORTHO05D009163 2.8e-58 229.6 202 56.9
HPP92_020128 Vanilla planifolia HOM05D007261 ORTHO05D009163 6.4e-55 218.4 212 58.0
Nitab4.5_0002113g0010 Nicotiana tabacum HOM05D000361 ORTHO05D007482 1.5e-51 207.2 140 72.1
CBR_g44525 Chara braunii HOM05D007261 ORTHO05D009163 6.6e-44 181.8 234 44.4
BcaC08g42890 Brassica carinata HOM05D007261 ORTHO05D009163 1.1e-43 181.0 138 65.9
Potri.003G159901 Populus trichocarpa HOM05D007261 ORTHO05D009163 7.8e-37 158.3 98 76.5
Actinidia30573 Actinidia chinensis HOM05D007261 ORTHO05D009163 1.9e-35 153.7 101 71.3
CDE05G1764 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 5.3e-33 145.6 119 60.5
Hma1.2p1_0738F.1_g211000 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 3.1e-25 119.8 87 71.3
PRCOL_00004129 Prasinoderma coloniale HOM05D007261 ORTHO05D009163 1.6e-18 97.4 142 43.0
PRCOL_00001953 Prasinoderma coloniale HOM05D005243 ORTHO05D006670 1.2e-08 64.7 187 27.8
HanXRQChr01g0002331 Helianthus annuus HOM05D001530 ORTHO05D003676 5.0e-07 59.3 214 27.1
HanXRQChr09g0267031 Helianthus annuus HOM05D005243 ORTHO05D006670 2.5e-06 57.0 185 27.0
Cre06.g262000 Chlamydomonas reinhardtii HOM05D001530 ORTHO05D003676 4.2e-06 56.2 141 24.8
Atru.chr13.2491 Acer truncatum HOM05D005243 ORTHO05D006670 7.2e-06 55.5 223 24.7
Atru.chr13.2503 Acer truncatum HOM05D005243 ORTHO05D006670 7.2e-06 55.5 223 24.7
Duzib138G1359 Durio zibethinus HOM05D001530 ORTHO05D003676 7.2e-06 55.5 202 26.7
BraA09t42168Z Brassica rapa HOM05D001530 ORTHO05D003676 9.3e-06 55.1 233 25.8
Cfa006116 Carpinus fangiana HOM05D001530 ORTHO05D003676 9.3e-06 55.1 202 27.2
CDE04G2106 Ceratophyllum demersum HOM05D005243 ORTHO05D006670 9.3e-06 55.1 180 27.2


User provided reference genes

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