Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD13G1133900 Malus domestica HOM05D000865 ORTHO05D000739 1.5e-112 409.5 198 100.0
MD16G1144500 Malus domestica HOM05D000865 ORTHO05D000739 1.6e-74 283.1 184 76.6
Prupe.1G211700 Prunus persica HOM05D000865 ORTHO05D000739 1.5e-48 196.8 180 59.4
CiPaw.05G098600 Carya illinoinensis HOM05D000865 ORTHO05D000739 2.2e-23 113.2 181 42.5
RcHm_v2.0_Chr4g0428431 Rosa chinensis HOM05D000865 ORTHO05D000739 2.2e-23 113.2 155 45.2
FAN12G3989 Fragaria x ananassa HOM05D000865 ORTHO05D000739 9.4e-22 107.8 164 44.5
FvH4_4g22200 Fragaria vesca HOM05D000865 ORTHO05D000739 1.2e-21 107.5 164 43.9
Haze_12526 Corylus avellana HOM05D004548 ORTHO05D005402 4.0e-20 102.4 163 42.9
Cfa009470 Carpinus fangiana HOM05D000865 ORTHO05D000739 1.2e-19 100.9 162 42.6
Atru.chr12.1470 Acer truncatum HOM05D000865 ORTHO05D000739 4.8e-18 95.5 164 40.9
Potri.003G160400 Populus trichocarpa HOM05D000865 ORTHO05D000739 1.1e-17 94.4 173 39.9
Thecc.01G239900 Theobroma cacao HOM05D000865 ORTHO05D000739 1.2e-16 90.9 145 42.8
TAR622G0532 Trochodendron aralioides HOM05D000865 ORTHO05D000739 4.5e-16 89.0 78 60.3
Manes.08G099500 Manihot esculenta HOM05D000865 ORTHO05D000739 1.3e-15 87.4 164 37.8
QL03p048365 Quercus lobata HOM05D000865 ORTHO05D000739 1.3e-15 87.4 162 39.5
Potri.001G070400 Populus trichocarpa HOM05D000865 ORTHO05D000739 1.7e-15 87.0 157 38.2
Nn4g22075 Nelumbo nucifera HOM05D000865 ORTHO05D000739 2.2e-15 86.7 153 37.3
GSVIVG01001118001 Vitis vinifera HOM05D004039 ORTHO05D011171 6.5e-15 85.1 128 44.5
Haze_14985 Corylus avellana HOM05D000865 ORTHO05D000739 2.5e-14 83.2 101 48.5
Duzib147G1335 Durio zibethinus HOM05D000865 ORTHO05D000739 2.5e-14 83.2 145 39.3
Ciclev10028983m.g Citrus clementina HOM05D000865 ORTHO05D000739 7.2e-14 81.6 157 36.9
Sabra03G0116600 Salix brachista HOM05D000865 ORTHO05D000739 1.6e-13 80.5 161 36.0
Actinidia19542 Actinidia chinensis HOM05D004665 ORTHO05D006264 1.0e-12 77.8 134 40.3
CiPaw.02G000100 Carya illinoinensis HOM05D000865 ORTHO05D000739 5.2e-12 75.5 102 44.1
Gohir.A02G140000 Gossypium hirsutum HOM05D000865 ORTHO05D000739 6.8e-12 75.1 136 38.2
Manes.04G097000 Manihot esculenta HOM05D000865 ORTHO05D000739 6.8e-12 75.1 133 42.9
Hma1.2p1_0738F.1_g210930 Hydrangea macrophylla HOM05D000865 ORTHO05D000739 8.8e-12 74.7 148 38.5
Cpa.g.sc70.37 Carica papaya HOM05D000865 ORTHO05D000739 1.2e-11 74.3 153 38.6
Gorai.003G052000 Gossypium raimondii HOM05D000865 ORTHO05D000739 1.2e-11 74.3 152 35.5
CSS0023807 Camellia sinensis var. sinensis HOM05D000865 ORTHO05D000739 1.5e-11 73.9 77 53.2
Thecc.04G051400 Theobroma cacao HOM05D000865 ORTHO05D000739 1.5e-11 73.9 143 38.5
Gohir.D03G050400 Gossypium hirsutum HOM05D000865 ORTHO05D000739 2.0e-11 73.6 136 36.8
Sabra13G0092400 Salix brachista HOM05D000865 ORTHO05D000739 2.0e-11 73.6 127 41.7
GSVIVG01032950001 Vitis vinifera HOM05D000001 ORTHO05D000003 2.0e-11 73.6 81 50.6
Ciclev10017662m.g Citrus clementina HOM05D000865 ORTHO05D000739 3.4e-11 72.8 122 42.6
Potri.013G107175 Populus trichocarpa HOM05D000865 ORTHO05D000739 4.4e-11 72.4 127 40.9
QL02p068256 Quercus lobata HOM05D000865 ORTHO05D000739 4.4e-11 72.4 85 50.6
Cfa007138 Carpinus fangiana HOM05D000865 ORTHO05D000739 7.5e-11 71.6 82 52.4
Nn1g00545 Nelumbo nucifera HOM05D000865 ORTHO05D000739 9.8e-11 71.2 126 38.9
Gohir.1Z049522 Gossypium hirsutum HOM05D000865 ORTHO05D000739 1.3e-10 70.9 116 40.5
Gorai.012G044800 Gossypium raimondii HOM05D000865 ORTHO05D000739 1.3e-10 70.9 116 40.5
PSO017G3240 Papaver somniferum HOM05D000865 ORTHO05D000739 1.7e-10 70.5 84 46.4
TWI36G0990 Tripterygium wilfordii HOM05D000865 ORTHO05D000739 1.7e-10 70.5 92 44.6
COL.COLO4_13402 Corchorus olitorius HOM05D004665 ORTHO05D006264 2.2e-10 70.1 149 38.3
Gohir.A05G376200 Gossypium hirsutum HOM05D000865 ORTHO05D000739 2.2e-10 70.1 115 40.9
TWI60G0277 Tripterygium wilfordii HOM05D000865 ORTHO05D000739 2.2e-10 70.1 81 49.4
TWI18G1208 Tripterygium wilfordii HOM05D000865 ORTHO05D000739 3.7e-10 69.3 80 46.2
PSO478G4973 Papaver somniferum HOM05D000865 ORTHO05D000739 4.9e-10 68.9 82 46.3
PGR102G0313 Punica granatum HOM05D000865 ORTHO05D000739 4.9e-10 68.9 122 37.7
Sc09g0007740 Simmondsia chinensis HOM05D000865 ORTHO05D000739 1.1e-09 67.8 150 36.7
Duzib187G0555 Durio zibethinus HOM05D000865 ORTHO05D000739 1.4e-09 67.4 84 48.8
Sabra01G0049300 Salix brachista HOM05D004548 ORTHO05D000739 1.4e-09 67.4 79 50.6
COL.COLO4_06613 Corchorus olitorius HOM05D000865 ORTHO05D000739 2.4e-09 66.6 121 39.7
CANSAT80G2586 Cannabis sativa HOM05D000865 ORTHO05D000739 3.1e-09 66.2 78 47.4
Aqoxy5G02998 Aquilegia oxysepala HOM05D000865 ORTHO05D000739 7.0e-09 65.1 88 45.5
Phvul.001G098700 Phaseolus vulgaris HOM05D000865 ORTHO05D000739 9.2e-09 64.7 66 45.5
Glyma.16G045500 Glycine max HOM05D000865 ORTHO05D000739 1.2e-08 64.3 128 35.2
Actinidia14306 Actinidia chinensis HOM05D000865 ORTHO05D000739 1.6e-08 63.9 58 53.4
Manes.11G073400 Manihot esculenta HOM05D000865 ORTHO05D000739 2.0e-08 63.5 131 38.9
Actinidia00029 Actinidia chinensis HOM05D000865 ORTHO05D000739 3.5e-08 62.8 58 53.4
Eucgr.I01570 Eucalyptus grandis HOM05D000865 ORTHO05D000739 4.5e-08 62.4 50 64.0
VMungo1383G1384 Vigna mungo HOM05D000865 ORTHO05D000739 4.5e-08 62.4 153 32.7
QL06p008669 Quercus lobata HOM05D000865 ORTHO05D000739 5.9e-08 62.0 66 43.9
Thecc.04G283200 Theobroma cacao HOM05D000865 ORTHO05D000739 5.9e-08 62.0 63 46.0
TPR.G31662 Trifolium pratense HOM05D000865 ORTHO05D000739 7.7e-08 61.6 151 31.1
MD17G1004000 Malus domestica HOM05D000865 ORTHO05D000739 1.0e-07 61.2 73 45.2
vmacro15241 Vaccinium macrocarpon HOM05D000865 ORTHO05D000739 1.0e-07 61.2 58 48.3
EL10Ac6g13906 Beta vulgaris HOM05D000865 ORTHO05D000739 1.7e-07 60.5 48 60.4
Duzib151G1190 Durio zibethinus HOM05D000865 ORTHO05D000739 2.3e-07 60.1 97 38.1
Manes.15G013300 Manihot esculenta HOM05D000865 ORTHO05D000739 2.3e-07 60.1 92 38.0
Nn4g25898 Nelumbo nucifera HOM05D000865 ORTHO05D000739 2.3e-07 60.1 57 49.1
PGR142G1530 Punica granatum HOM05D000865 ORTHO05D000739 2.3e-07 60.1 64 51.6
CSS0011101 Camellia sinensis var. sinensis HOM05D000865 ORTHO05D000739 2.9e-07 59.7 58 48.3
COL.COLO4_13890 Corchorus olitorius HOM05D000865 ORTHO05D000739 2.9e-07 59.7 58 46.6
Dinv29770 Davidia involucrata HOM05D000865 ORTHO05D000739 2.9e-07 59.7 56 48.2
Potri.010G024200 Populus trichocarpa HOM05D000865 ORTHO05D000739 2.9e-07 59.7 57 47.4
Rhsim02G0010800 Rhododendron simsii HOM05D000407 ORTHO05D000739 2.9e-07 59.7 58 50.0
Lj1g0006851 Lotus japonicus HOM05D000865 ORTHO05D000739 3.8e-07 59.3 140 32.1
Lalb_Chr24g0402961 Lupinus albus HOM05D000865 ORTHO05D000739 3.8e-07 59.3 137 32.8
Rhsim02G0009700 Rhododendron simsii HOM05D000407 ORTHO05D000739 3.8e-07 59.3 58 46.6
TAR362G0271 Trochodendron aralioides HOM05D000865 ORTHO05D000739 3.8e-07 59.3 57 49.1
CANSAT78G0327 Cannabis sativa HOM05D000865 ORTHO05D000739 5.0e-07 58.9 78 38.5
Gohir.A09G239900 Gossypium hirsutum HOM05D000865 ORTHO05D000739 5.0e-07 58.9 59 45.8
Rhsim08G0037500 Rhododendron simsii HOM05D004039 ORTHO05D000739 6.6e-07 58.5 88 40.9
TAR636G2581 Trochodendron aralioides HOM05D000865 ORTHO05D000739 8.6e-07 58.2 57 50.9
Cc00_g10550 Coffea canephora HOM05D000865 ORTHO05D000739 1.1e-06 57.8 62 45.2
Duzib212G0059 Durio zibethinus HOM05D000865 ORTHO05D000739 1.1e-06 57.8 142 29.6
Rhsim02G0010900 Rhododendron simsii HOM05D000865 ORTHO05D000739 1.1e-06 57.8 82 42.7
Duzib052G0438 Durio zibethinus HOM05D000865 ORTHO05D000739 1.5e-06 57.4 58 41.4
Migut.N00094 Erythranthe guttata HOM05D000865 ORTHO05D000739 1.5e-06 57.4 81 37.0
Gohir.D09G240700 Gossypium hirsutum HOM05D000865 ORTHO05D000739 2.5e-06 56.6 59 44.1
Gorai.006G263800 Gossypium raimondii HOM05D000865 ORTHO05D000739 2.5e-06 56.6 59 44.1
MD16G1170900 Malus domestica HOM05D000865 ORTHO05D000739 2.5e-06 56.6 80 40.0
DCAR_027081 Daucus carota HOM05D000865 ORTHO05D000739 3.3e-06 56.2 97 34.0
Lsat_1_v5_gn_5_53581 Lactuca sativa HOM05D000865 ORTHO05D000739 3.3e-06 56.2 57 47.4
Peaxi162Scf00534g00013 Petunia axillaris HOM05D000865 ORTHO05D000739 3.3e-06 56.2 57 45.6
Psat3g092760 Pisum sativum HOM05D000865 ORTHO05D000739 3.3e-06 56.2 50 52.0
CiPaw.01G149500 Carya illinoinensis HOM05D000865 ORTHO05D000739 4.3e-06 55.8 103 35.9
ECA240G0693 Erigeron canadensis HOM05D000865 ORTHO05D000739 4.3e-06 55.8 72 43.1
Oeu058950.1 Olea europaea HOM05D000865 ORTHO05D000739 4.3e-06 55.8 61 44.3
SGA_v2.0_scaffold67G22660 Striga asiatica HOM05D000865 ORTHO05D000739 5.6e-06 55.5 77 36.4
Potri.008G209800 Populus trichocarpa HOM05D000865 ORTHO05D000739 7.3e-06 55.1 56 42.9
Rhsim02G0009800 Rhododendron simsii HOM05D000865 ORTHO05D000739 7.3e-06 55.1 58 46.6
Aqoxy2G03021 Aquilegia oxysepala HOM05D000865 ORTHO05D000739 9.5e-06 54.7 57 49.1
CiPaw.02G083700 Carya illinoinensis HOM05D000865 ORTHO05D000739 9.5e-06 54.7 60 46.7
Ca_08232_v3 Cicer arietinum L. HOM05D000865 ORTHO05D000739 9.5e-06 54.7 50 48.0
FvH4_4g17880 Fragaria vesca HOM05D000865 ORTHO05D000739 9.5e-06 54.7 52 48.1
FAN12G1524 Fragaria x ananassa HOM05D000865 ORTHO05D000739 9.5e-06 54.7 52 48.1
Lj3P816T16 Lonicera japonica HOM05D000865 ORTHO05D000739 9.5e-06 54.7 105 32.4
RcHm_v2.0_Chr4g0422011 Rosa chinensis HOM05D000865 ORTHO05D000739 9.5e-06 54.7 52 50.0
SGA_v2.0_scaffold91G27990 Striga asiatica HOM05D000865 ORTHO05D000739 9.5e-06 54.7 78 38.5


User provided reference genes

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