Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 9.6e-101 370.2 187 100.0
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 3.8e-57 225.3 181 70.2
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 6.8e-54 214.5 180 72.2
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 5.4e-51 204.9 178 64.6
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 8.5e-49 197.6 178 60.7
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 3.2e-48 195.7 178 61.8
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 5.5e-48 194.9 178 61.8
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 1.0e-46 190.7 172 65.7
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 2.3e-46 189.5 130 73.1
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 5.2e-46 188.3 130 72.3
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 8.8e-46 187.6 137 69.3
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 8.8e-46 187.6 167 64.1
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 1.5e-45 186.8 140 68.6
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 2.0e-45 186.4 116 78.4
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 2.2e-44 183.0 168 59.5
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 4.9e-44 181.8 174 60.9
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 4.9e-44 181.8 173 59.5
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 8.3e-44 181.0 162 61.1
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 1.1e-43 180.6 165 60.0
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 1.4e-43 180.3 129 72.1
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 1.8e-43 179.9 157 60.5
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 5.4e-43 178.3 164 57.9
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 5.4e-43 178.3 174 58.6
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 5.4e-43 178.3 169 60.4
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 1.2e-42 177.2 128 71.9
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 1.2e-42 177.2 146 65.1
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 1.6e-42 176.8 138 65.9
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 2.7e-42 176.0 180 56.1
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 3.5e-42 175.6 121 70.2
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 5.9e-42 174.9 168 59.5
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 5.9e-42 174.9 167 57.5
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 7.7e-42 174.5 164 61.0
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 7.7e-42 174.5 170 58.2
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 1.0e-41 174.1 145 62.1
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.3e-41 173.7 149 63.1
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.3e-41 173.7 149 63.1
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 1.3e-41 173.7 170 59.4
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 1.3e-41 173.7 119 70.6
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 1.7e-41 173.3 115 73.0
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 1.7e-41 173.3 130 66.2
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 1.7e-41 173.3 129 67.4
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 2.3e-41 172.9 143 62.2
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 2.9e-41 172.6 164 56.7
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 2.9e-41 172.6 117 72.6
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 2.9e-41 172.6 140 64.3
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 5.0e-41 171.8 165 57.0
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 5.0e-41 171.8 111 73.0
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 6.6e-41 171.4 176 53.4
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 8.6e-41 171.0 143 65.0
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 1.1e-40 170.6 194 52.1
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 1.1e-40 170.6 164 54.9
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 1.5e-40 170.2 125 66.4
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 1.5e-40 170.2 164 56.1
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 1.9e-40 169.9 168 55.4
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 1.9e-40 169.9 129 65.9
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 1.9e-40 169.9 129 65.9
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 2.5e-40 169.5 164 56.1
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 2.5e-40 169.5 134 63.4
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 3.3e-40 169.1 111 75.7
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 4.3e-40 168.7 129 66.7
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 4.3e-40 168.7 165 55.2
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 4.3e-40 168.7 126 68.3
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 7.2e-40 167.9 121 67.8
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 1.2e-39 167.2 163 56.4
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 1.6e-39 166.8 154 58.4
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 2.1e-39 166.4 116 69.8
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 2.1e-39 166.4 137 64.2
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 2.1e-39 166.4 117 70.1
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 2.1e-39 166.4 127 65.4
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 2.8e-39 166.0 164 54.9
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 2.8e-39 166.0 155 58.7
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 2.8e-39 166.0 147 59.9
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 6.1e-39 164.9 143 62.2
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 8.0e-39 164.5 164 54.3
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 8.0e-39 164.5 164 54.3
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 8.0e-39 164.5 164 54.3
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 8.0e-39 164.5 174 52.9
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 8.0e-39 164.5 170 54.7
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 1.0e-38 164.1 127 64.6
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 1.0e-38 164.1 166 53.0
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 1.0e-38 164.1 130 64.6
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 1.8e-38 163.3 151 57.0
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 2.3e-38 162.9 128 65.6
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 3.0e-38 162.5 155 57.4
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 4.0e-38 162.2 110 70.9
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 8.9e-38 161.0 139 59.0
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 8.9e-38 161.0 159 59.1
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 1.5e-37 160.2 108 71.3
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 2.0e-37 159.8 140 60.7
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 2.0e-37 159.8 128 64.8
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 3.4e-37 159.1 106 72.6
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 1.7e-36 156.8 103 71.8
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 2.2e-36 156.4 124 62.1
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 2.2e-36 156.4 131 59.5
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 8.3e-36 154.5 110 66.4
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 2.4e-35 152.9 90 77.8
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 3.5e-34 149.1 116 62.1
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 3.5e-34 149.1 108 66.7
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 1.0e-33 147.5 135 57.8
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 1.0e-33 147.5 135 57.8
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 1.0e-33 147.5 135 57.8
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 2.1e-31 139.8 127 53.5
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 1.2e-29 134.0 96 66.7
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 1.6e-26 123.6 162 47.5
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 3.6e-23 112.5 111 52.3
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 6.8e-22 108.2 138 44.2
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 1.5e-21 107.1 110 60.0
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 1.1e-19 100.9 116 48.3
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 1.4e-19 100.5 136 42.6
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 1.3e-17 94.0 74 66.2
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 3.0e-17 92.8 114 49.1
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 1.2e-15 87.4 121 37.2
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 4.6e-10 68.9 38 73.7
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 1.9e-08 63.5 144 38.2


User provided reference genes

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