Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD13G1033700 Malus domestica HOM05D000072 ORTHO05D000026 3.8e-72 274.6 129 100.0
Prupe.1G319100 Prunus persica HOM05D000072 ORTHO05D000026 8.0e-46 187.2 126 72.2
Prupe.1G319000 Prunus persica HOM05D000072 ORTHO05D000026 2.2e-40 169.1 127 66.9
MD16G1035600 Malus domestica HOM05D000072 ORTHO05D000026 4.0e-37 158.3 126 63.5
MD13G1033800 Malus domestica HOM05D000072 ORTHO05D000026 1.8e-34 149.4 126 61.1
RcHm_v2.0_Chr4g0434121 Rosa chinensis HOM05D000072 ORTHO05D000026 5.7e-28 127.9 138 53.6
RcHm_v2.0_Chr4g0434131 Rosa chinensis HOM05D000072 ORTHO05D000026 9.2e-26 120.6 135 50.4
FAN07G2099 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.0e-24 117.1 118 52.5
FvH4_4g26500 Fragaria vesca HOM05D000072 ORTHO05D000026 1.7e-24 116.3 134 49.3
FvH4_4g26480 Fragaria vesca HOM05D000072 ORTHO05D000026 2.9e-24 115.5 118 54.2
FAN17G0361 Fragaria x ananassa HOM05D000072 ORTHO05D000026 5.0e-24 114.8 134 48.5
FAN12G1669 Fragaria x ananassa HOM05D000798 ORTHO05D000659 6.6e-24 114.4 118 53.4
FAN12G4254 Fragaria x ananassa HOM05D000798 ORTHO05D000659 1.1e-23 113.6 118 53.4
vmacro01414 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 1.1e-15 87.0 127 35.4
Rhsim12G0087200 Rhododendron simsii HOM05D000072 ORTHO05D000026 1.9e-15 86.3 126 34.9
Cpa.g.sc65.78 Carica papaya HOM05D000072 ORTHO05D000026 9.5e-15 84.0 119 38.7
Thecc.02G303100 Theobroma cacao HOM05D000072 ORTHO05D000026 4.7e-14 81.6 127 36.2
CSS0019749 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 3.1e-13 79.0 116 37.9
Manes.14G108500 Manihot esculenta HOM05D000072 ORTHO05D000026 3.1e-13 79.0 126 37.3
CSS0039333 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 4.0e-13 78.6 116 37.1
Duzib248G0805 Durio zibethinus HOM05D000072 ORTHO05D000026 4.4e-12 75.1 130 33.8
Nn4g23990 Nelumbo nucifera HOM05D000072 ORTHO05D000026 7.5e-12 74.3 128 34.4
Duzib248G1234 Durio zibethinus HOM05D000072 ORTHO05D000026 2.2e-11 72.8 100 40.0
Gorai.012G183300 Gossypium raimondii HOM05D000072 ORTHO05D000026 8.3e-11 70.9 131 33.6
Thecc.02G303200 Theobroma cacao HOM05D000072 ORTHO05D000026 1.1e-10 70.5 114 33.3
COL.COLO4_27574 Corchorus olitorius HOM05D000072 ORTHO05D000026 1.4e-10 70.1 122 36.1
Duzib268G1652 Durio zibethinus HOM05D000072 ORTHO05D000026 2.4e-10 69.3 129 31.0
Gohir.D04G187900 Gossypium hirsutum HOM05D000072 ORTHO05D000026 4.1e-10 68.6 131 33.6
Gohir.A04G143600 Gossypium hirsutum HOM05D000072 ORTHO05D000026 5.4e-10 68.2 131 34.4
COL.COLO4_27571 Corchorus olitorius HOM05D000072 ORTHO05D000026 6.0e-09 64.7 160 28.1
Ciclev10018385m.g Citrus clementina HOM05D000072 ORTHO05D000026 1.0e-08 63.9 107 36.4
Gohir.A03G149300 Gossypium hirsutum HOM05D000072 ORTHO05D000026 1.0e-08 63.9 128 28.9
FAN17G1421 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.3e-08 63.5 63 54.0
Gohir.D09G090100 Gossypium hirsutum HOM05D000072 ORTHO05D000026 1.3e-08 63.5 104 34.6
Gorai.006G106500 Gossypium raimondii HOM05D000072 ORTHO05D000026 1.3e-08 63.5 104 34.6
Atru.chr2.3018 Acer truncatum HOM05D000072 ORTHO05D000026 3.0e-08 62.4 88 40.9
Gohir.D02G172200 Gossypium hirsutum HOM05D000072 ORTHO05D000026 3.0e-08 62.4 128 28.9
Gorai.005G193900 Gossypium raimondii HOM05D000072 ORTHO05D000026 3.0e-08 62.4 128 28.9
Potri.008G125500 Populus trichocarpa HOM05D000072 ORTHO05D000026 3.0e-08 62.4 109 34.9
FAN22G2202 Fragaria x ananassa HOM05D000798 ORTHO05D035058 3.9e-08 62.0 45 62.2
Sabra10G0089200 Salix brachista HOM05D000072 ORTHO05D000026 8.6e-08 60.8 109 33.0
Potri.010G118300 Populus trichocarpa HOM05D000072 ORTHO05D000026 1.1e-07 60.5 109 32.1
Atru.chr2.3095 Acer truncatum HOM05D000072 ORTHO05D016399 2.5e-07 59.3 97 41.2
Ciclev10017895m.g Citrus clementina HOM05D000072 ORTHO05D000026 2.5e-07 59.3 107 34.6
Prupe.1G318900 Prunus persica HOM05D000072 ORTHO05D000026 9.5e-07 57.4 87 40.2
GSVIVG01011815001 Vitis vinifera HOM05D000072 ORTHO05D000026 8.1e-06 54.3 42 50.0


User provided reference genes

Program Settings