Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD13G1015700 Malus domestica HOM05D007520 ORTHO05D009417 2.2e-129 465.7 240 100.0
Prupe.1G338000 Prunus persica HOM05D007520 ORTHO05D009417 9.8e-106 387.1 238 83.2
RcHm_v2.0_Chr4g0433681 Rosa chinensis HOM05D007520 ORTHO05D009417 2.5e-93 345.9 238 76.1
FvH4_4g26110 Fragaria vesca HOM05D007520 ORTHO05D009417 1.0e-91 340.5 232 75.0
CANSAT78G2519 Cannabis sativa HOM05D007520 ORTHO05D009417 2.3e-78 296.2 230 68.3
FAN12G3032 Fragaria x ananassa HOM05D007520 ORTHO05D009417 2.2e-73 279.6 201 73.6
FAN12G3090 Fragaria x ananassa HOM05D007520 ORTHO05D009417 2.2e-73 279.6 201 73.6
Gorai.008G169800 Gossypium raimondii HOM05D007520 ORTHO05D009417 3.7e-73 278.9 235 60.4
Migut.L00619 Erythranthe guttata HOM05D007520 ORTHO05D009417 4.9e-73 278.5 225 64.4
TWI53G0076 Tripterygium wilfordii HOM05D007520 ORTHO05D009417 4.9e-73 278.5 224 65.2
Duzib268G1867 Durio zibethinus HOM05D007520 ORTHO05D009417 1.1e-72 277.3 227 61.7
TAR374G0082 Trochodendron aralioides HOM05D000504 ORTHO05D000403 9.2e-72 274.2 212 67.5
Manes.17G089333 Manihot esculenta HOM05D007520 ORTHO05D009417 2.3e-70 269.6 227 64.3
Sed0012329 Sechium edule HOM05D007520 ORTHO05D009417 3.0e-70 269.2 237 62.9
CiPaw.06G058600 Carya illinoinensis HOM05D007520 ORTHO05D009417 3.9e-70 268.9 227 64.3
Nn4g24547 Nelumbo nucifera HOM05D007520 ORTHO05D009417 3.9e-70 268.9 224 63.4
Ciclev10016556m.g Citrus clementina HOM05D007520 ORTHO05D009417 1.5e-69 266.9 209 66.5
Actinidia11793 Actinidia chinensis HOM05D007520 ORTHO05D009417 7.3e-69 264.6 211 66.8
Sopen04g032100 Solanum pennellii HOM05D007520 ORTHO05D009417 7.3e-69 264.6 226 61.9
FAN17G2852 Fragaria x ananassa HOM05D007520 ORTHO05D009417 9.5e-69 264.2 225 66.2
Nitab4.5_0004339g0060 Nicotiana tabacum HOM05D007520 ORTHO05D009417 2.1e-68 263.1 229 63.3
TPR.G35527 Trifolium pratense HOM05D007520 ORTHO05D009417 2.1e-68 263.1 226 61.9
COL.COLO4_27582 Corchorus olitorius HOM05D007520 ORTHO05D009417 1.1e-67 260.8 200 66.0
Solyc04g078500.1 Solanum lycopersicum HOM05D007520 ORTHO05D009417 1.1e-67 260.8 226 61.9
PGSC0003DMG400041336 Solanum tuberosum HOM05D001905 ORTHO05D001820 1.1e-67 260.8 226 61.9
Nitab4.5_0010118g0020 Nicotiana tabacum HOM05D007520 ORTHO05D009417 5.2e-67 258.5 229 62.4
Lj2g0009613 Lotus japonicus HOM05D007520 ORTHO05D009417 1.2e-66 257.3 226 61.1
CAN.G1812.4 Capsicum annuum HOM05D007520 ORTHO05D009417 5.8e-66 255.0 225 60.0
MELO3C020056.2 Cucumis melo HOM05D007520 ORTHO05D009417 1.7e-65 253.4 225 59.1
Psat6g100600 Pisum sativum HOM05D007520 ORTHO05D009417 2.9e-65 252.7 226 60.2
Medtr1g038820 Medicago truncatula HOM05D007520 ORTHO05D009417 6.4e-65 251.5 226 58.8
Hma1.2p1_0095F.1_g047520 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 8.4e-65 251.1 200 66.5
CsaV3_5G012990 Cucumis sativus L. HOM05D007520 ORTHO05D009417 1.1e-64 250.8 225 58.2
PGR042G3173 Punica granatum HOM05D007520 ORTHO05D009417 1.4e-64 250.4 223 59.2
QL03p039135 Quercus lobata HOM05D007520 ORTHO05D009417 2.4e-64 249.6 201 66.2
Aqoxy5G01264 Aquilegia oxysepala HOM05D007520 ORTHO05D009417 7.1e-64 248.1 223 58.3
ECA246G0416 Erigeron canadensis HOM05D007520 ORTHO05D009417 7.1e-64 248.1 233 57.5
Thhalv10005705m.g Eutrema salsugineum HOM05D007520 ORTHO05D009417 7.1e-64 248.1 223 58.7
Phvul.003G001900 Phaseolus vulgaris HOM05D007520 ORTHO05D009417 1.6e-63 246.9 226 57.1
BolC7t43791H Brassica oleracea HOM05D007520 ORTHO05D009417 2.1e-63 246.5 223 57.4
BraA06t27270Z Brassica rapa HOM05D007520 ORTHO05D009417 3.5e-63 245.7 223 57.4
CARHR144480 Cardamine hirsuta HOM05D007520 ORTHO05D009417 7.8e-63 244.6 223 57.0
Sp2g13330 Schrenkiella parvula HOM05D007520 ORTHO05D009417 2.3e-62 243.0 223 57.0
AT2G01905 Arabidopsis thaliana HOM05D007520 ORTHO05D009417 3.0e-62 242.7 223 57.0
AL5G11020 Arabidopsis lyrata HOM05D007520 ORTHO05D009417 1.1e-61 240.7 223 56.5
SGA_v2.0_scaffold172G39028 Striga asiatica HOM05D007520 ORTHO05D009417 1.5e-61 240.4 226 58.0
C07p32740 Brassica napus HOM05D007520 ORTHO05D009417 5.6e-61 238.4 223 57.0
THA.LOC104824117 Tarenaya hassleriana HOM05D007520 ORTHO05D009417 5.6e-61 238.4 223 55.6
A06p43940 Brassica napus HOM05D007520 ORTHO05D009417 2.1e-60 236.5 223 56.5
PSO017G5472 Papaver somniferum HOM05D007520 ORTHO05D009417 1.4e-59 233.8 229 55.9
Thecc.02G303900 Theobroma cacao HOM05D007520 ORTHO05D009417 1.8e-59 233.4 169 66.9
PSO478G1043 Papaver somniferum HOM05D007520 ORTHO05D009417 1.5e-58 230.3 234 54.3
HanXRQChr12g0379401 Helianthus annuus HOM05D007520 ORTHO05D009417 1.4e-56 223.8 214 57.0
arahy.Tifrunner.gnm1.ann1.RL07R4 Arachis hypogaea HOM05D007520 ORTHO05D009417 2.4e-56 223.0 203 59.6
VMungo0251G1805 Vigna mungo HOM05D007520 ORTHO05D009417 7.1e-56 221.5 226 55.3
BcaC06g31264 Brassica carinata HOM05D007520 ORTHO05D009417 1.2e-55 220.7 202 59.4
Atru.chr11.1007 Acer truncatum HOM05D007520 ORTHO05D009417 2.7e-55 219.5 205 58.5
FAN22G1570 Fragaria x ananassa HOM05D000296 ORTHO05D000175 7.8e-55 218.0 147 76.9
Aa31LG2G8010 Aethionema arabicum HOM05D007520 ORTHO05D009417 1.7e-54 216.9 231 53.2
Sc15g0004470 Simmondsia chinensis HOM05D007520 ORTHO05D009417 5.6e-53 211.8 226 49.1
EL10Ac1g01972 Beta vulgaris HOM05D007520 ORTHO05D009417 8.1e-52 208.0 229 51.1
Ah.11g041100 Amaranthus hybridus HOM05D007520 ORTHO05D009417 6.9e-51 204.9 229 48.5
Zm00001eb010100 Zea mays HOM05D007520 ORTHO05D009417 2.4e-48 196.4 203 48.3
Lalb_Chr10g0094861 Lupinus albus HOM05D007520 ORTHO05D009417 9.3e-48 194.5 185 56.2
Glyma.14G224300 Glycine max HOM05D007520 ORTHO05D009417 4.6e-47 192.2 155 63.2
Lsat_1_v5_gn_5_170921 Lactuca sativa HOM05D007520 ORTHO05D009417 5.3e-43 178.7 200 50.5
Atru.BG.295.p Acer truncatum HOM05D007520 ORTHO05D009417 9.9e-42 174.5 130 68.5
GSVIVG01011595001 Vitis vinifera HOM05D007520 ORTHO05D009417 4.9e-41 172.2 115 73.0
Rhsim09G0085600 Rhododendron simsii HOM05D007520 ORTHO05D009417 3.5e-39 166.0 171 55.6
AUR62036879 Chenopodium quinoa HOM05D007520 ORTHO05D009417 1.3e-38 164.1 163 50.3
SalBow4G2630 Salvia bowleyana HOM05D007520 ORTHO05D009417 6.7e-38 161.8 126 66.7
Gohir.D12G157000 Gossypium hirsutum HOM05D007520 ORTHO05D009417 2.5e-37 159.8 226 42.5
SalBow3G0394 Salvia bowleyana HOM05D007520 ORTHO05D009417 3.3e-37 159.5 114 71.1
Gohir.A12G153900 Gossypium hirsutum HOM05D007520 ORTHO05D009417 1.6e-36 157.1 226 42.0
CSS0021820 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 4.0e-35 152.5 119 64.7
CSS0032687 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 4.0e-35 152.5 119 64.7
Dinv08902 Davidia involucrata HOM05D007520 ORTHO05D009417 6.9e-35 151.8 149 58.4
CSS0024703 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 2.9e-33 146.4 135 57.8
DCAR_002655 Daucus carota HOM05D007520 ORTHO05D009417 8.4e-33 144.8 126 60.3
Hma1.2p1_0095F.1_g047530 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 2.7e-31 139.8 228 44.3
Carub.0005s0090 Capsella rubella HOM05D007520 ORTHO05D009417 4.6e-31 139.0 109 63.3
CSS0003025 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 3.9e-30 136.0 135 54.8
MSTRG.8107 Avicennia marina HOM05D007520 ORTHO05D009417 6.7e-30 135.2 118 65.3
SalBow6G7185 Salvia bowleyana HOM05D007520 ORTHO05D009417 6.7e-30 135.2 100 69.0
PGSC0003DMG400013121 Solanum tuberosum HOM05D007520 ORTHO05D009417 2.5e-29 133.3 113 62.8
GSVIVG01011596001 Vitis vinifera HOM05D007520 ORTHO05D009417 6.3e-28 128.6 108 63.0
Cc11_g05730 Coffea canephora HOM05D007520 ORTHO05D009417 2.4e-27 126.7 107 60.7
SalBow2G3493 Salvia bowleyana HOM05D007520 ORTHO05D009417 6.9e-27 125.2 88 71.6
ClCG11G001000 Citrullus lanatus HOM05D007520 ORTHO05D009417 1.5e-26 124.0 130 50.8
Lj3A859T72 Lonicera japonica HOM05D007520 ORTHO05D009417 7.6e-26 121.7 131 54.2
HPP92_016407 Vanilla planifolia HOM05D007520 ORTHO05D009417 5.0e-25 119.0 118 50.8
Dinv08901 Davidia involucrata HOM05D007520 ORTHO05D009417 3.6e-23 112.8 72 75.0
Carub.0005s0089 Capsella rubella HOM05D007520 ORTHO05D009417 7.9e-23 111.7 122 50.0
CSS0008274 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 2.4e-19 100.1 64 75.0
CDE06G1244 Ceratophyllum demersum HOM05D007520 ORTHO05D009417 4.1e-19 99.4 103 48.5
Mapoly0059s0009 Marchantia polymorpha HOM05D007520 ORTHO05D009417 6.9e-19 98.6 223 30.0
Eucgr.B02652 Eucalyptus grandis HOM05D007520 ORTHO05D009417 5.9e-18 95.5 73 61.6
Haze_10814 Corylus avellana HOM05D007520 ORTHO05D009417 1.4e-16 90.9 75 64.0
Pp3c10_19450 Physcomitrium patens HOM05D007520 ORTHO05D009417 3.2e-16 89.7 175 30.3
AUR62026615 Chenopodium quinoa HOM05D007520 ORTHO05D009417 2.7e-15 86.7 108 43.5
HPP92_016406 Vanilla planifolia HOM05D007520 ORTHO05D009417 7.9e-15 85.1 74 60.8
AUR62032185 Chenopodium quinoa HOM05D007520 ORTHO05D009417 5.1e-14 82.4 96 42.7
MD17G1182100 Malus domestica HOM05D007520 ORTHO05D009417 2.0e-10 70.5 53 69.8
AUR62033544 Chenopodium quinoa HOM05D000122 ORTHO05D009417 6.5e-09 65.5 82 39.0


User provided reference genes

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