Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD12G1194100 Malus domestica HOM05D009827 ORTHO05D011093 4.8e-165 584.7 365 100.0
Prupe.6G298800 Prunus persica HOM05D009827 ORTHO05D011093 9.1e-79 298.1 369 55.6
FAN14G2231 Fragaria x ananassa HOM05D009827 ORTHO05D011093 1.9e-52 210.7 403 40.7
FvH4_6g09310 Fragaria vesca HOM05D009827 ORTHO05D011093 1.2e-51 208.0 395 41.5
FAN05G4485 Fragaria x ananassa HOM05D009827 ORTHO05D011093 5.7e-49 199.1 396 40.2
QL07p031438 Quercus lobata HOM05D009827 ORTHO05D011093 3.6e-27 126.7 300 36.3
Potri.006G112400 Populus trichocarpa HOM05D009827 ORTHO05D011093 6.2e-27 125.9 312 35.9
QL07p030604 Quercus lobata HOM05D009827 ORTHO05D011093 5.2e-26 122.9 301 36.2
Potri.016G141900 Populus trichocarpa HOM05D009827 ORTHO05D011093 1.7e-24 117.9 227 38.3
TAR623G0462 Trochodendron aralioides HOM05D009827 ORTHO05D011093 1.1e-23 115.2 298 33.6
Sabra06G0087600 Salix brachista HOM05D009827 ORTHO05D011093 1.6e-22 111.3 307 32.9
FAN09G0532 Fragaria x ananassa HOM05D009827 ORTHO05D011093 3.0e-21 107.1 244 40.2
Cfa016993 Carpinus fangiana HOM05D009827 ORTHO05D011093 4.0e-18 96.7 193 40.4
Haze_21212 Corylus avellana HOM05D009827 ORTHO05D011093 4.6e-14 83.2 89 55.1
Manes.09G120800 Manihot esculenta HOM05D009827 ORTHO05D011093 1.0e-13 82.0 301 33.2
arahy.Tifrunner.gnm1.ann1.E3KERN Arachis hypogaea HOM05D021251 ORTHO05D011093 8.6e-13 79.0 305 27.2
Sabra04G0158100 Salix brachista HOM05D009827 ORTHO05D011093 7.3e-12 75.9 295 29.2
Manes.08G167500 Manihot esculenta HOM05D009827 ORTHO05D011093 9.6e-12 75.5 233 32.6
arahy.Tifrunner.gnm1.ann1.NBHG8S Arachis hypogaea HOM05D021251 ORTHO05D011093 4.7e-11 73.2 196 31.6
Rhsim05G0234200 Rhododendron simsii HOM05D009827 ORTHO05D011093 6.2e-11 72.8 235 28.5
Dinv16931 Davidia involucrata HOM05D009827 ORTHO05D011093 4.0e-10 70.1 118 45.8
arahy.Tifrunner.gnm1.ann1.DK33FB Arachis hypogaea HOM05D021251 ORTHO05D011093 6.8e-10 69.3 212 28.8
CANSAT21G1012 Cannabis sativa HOM05D009827 ORTHO05D011093 4.4e-09 66.6 340 28.5
Sopen10g027240 Solanum pennellii HOM05D019707 ORTHO05D011093 2.9e-08 63.9 201 28.9
Medtr7g074220 Medicago truncatula HOM05D021251 ORTHO05D011093 4.9e-08 63.2 205 28.3
RcHm_v2.0_Chr3g0459701 Rosa chinensis HOM05D009827 ORTHO05D011093 6.4e-08 62.8 181 35.4
Atru.chr8.54 Acer truncatum HOM05D009827 ORTHO05D011093 1.4e-07 61.6 208 34.6
PGSC0003DMG400027693 Solanum tuberosum HOM05D019707 ORTHO05D011093 1.9e-07 61.2 206 29.1
Nitab4.5_0002139g0030 Nicotiana tabacum HOM05D019707 ORTHO05D011093 7.1e-07 59.3 215 28.8
Oeu026924.1 Olea europaea HOM05D009827 ORTHO05D011093 7.1e-07 59.3 106 39.6
PGSC0003DMG400027695 Solanum tuberosum HOM05D019707 ORTHO05D011093 2.1e-06 57.8 83 43.4
TPR.G24306 Trifolium pratense HOM05D021251 ORTHO05D011093 2.1e-06 57.8 296 26.4
Eucgr.A00823 Eucalyptus grandis HOM05D009827 ORTHO05D011093 3.5e-06 57.0 228 28.9


User provided reference genes

Program Settings