Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 7.1e-86 320.5 152 100.0
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 2.3e-68 262.3 148 83.1
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 7.2e-62 240.7 143 74.1
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.1e-59 233.4 143 72.7
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 9.7e-59 230.3 143 71.3
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 4.8e-58 228.0 143 70.6
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 6.9e-57 224.2 143 69.2
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 2.1e-45 186.0 143 60.1
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 1.8e-44 183.0 151 60.9
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 2.0e-43 179.5 151 60.9
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 9.7e-43 177.2 160 57.5
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 3.7e-42 175.3 158 56.3
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 3.7e-42 175.3 159 56.6
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 2.4e-41 172.6 151 59.6
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 3.1e-41 172.2 151 57.6
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 7.0e-41 171.0 135 61.5
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 1.2e-40 170.2 161 56.5
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 2.6e-40 169.1 151 55.6
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 1.3e-39 166.8 138 59.4
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 2.2e-39 166.0 148 56.1
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 2.2e-39 166.0 160 54.4
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 6.5e-39 164.5 114 66.7
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 6.5e-39 164.5 159 54.1
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 6.5e-39 164.5 103 70.9
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 3.2e-38 162.2 100 70.0
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 1.2e-37 160.2 133 56.4
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 2.1e-37 159.5 136 58.1
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 2.7e-37 159.1 161 51.6
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 3.6e-37 158.7 100 69.0
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 3.6e-37 158.7 128 60.2
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 6.1e-37 157.9 147 55.8
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 1.0e-36 157.1 158 50.0
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 1.0e-36 157.1 132 56.8
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 1.8e-36 156.4 155 52.3
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 2.3e-36 156.0 151 50.3
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 2.3e-36 156.0 157 51.0
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 3.0e-36 155.6 87 75.9
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 3.0e-36 155.6 100 69.0
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 4.0e-36 155.2 150 51.3
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 4.0e-36 155.2 124 60.5
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 6.7e-36 154.5 100 68.0
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 6.7e-36 154.5 129 58.9
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 8.8e-36 154.1 157 51.6
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 8.8e-36 154.1 82 81.7
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 1.2e-35 153.7 96 71.9
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 1.5e-35 153.3 158 48.1
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 2.0e-35 152.9 157 47.8
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 2.6e-35 152.5 98 69.4
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 3.3e-35 152.1 138 55.8
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 4.4e-35 151.8 148 50.0
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 5.7e-35 151.4 154 51.3
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 7.5e-35 151.0 136 55.9
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 7.5e-35 151.0 157 47.1
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 7.5e-35 151.0 141 55.3
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 7.5e-35 151.0 143 52.4
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 9.7e-35 150.6 96 65.6
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 1.3e-34 150.2 87 73.6
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 1.3e-34 150.2 87 73.6
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 1.7e-34 149.8 106 63.2
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 2.2e-34 149.4 156 47.4
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 2.2e-34 149.4 141 56.0
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 4.8e-34 148.3 99 63.6
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 4.8e-34 148.3 106 64.2
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 6.3e-34 147.9 156 47.4
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 8.2e-34 147.5 82 78.0
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 8.2e-34 147.5 86 74.4
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 1.1e-33 147.1 143 53.1
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 2.4e-33 146.0 157 47.8
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 9.1e-33 144.1 85 70.6
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 9.1e-33 144.1 84 73.8
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 1.6e-32 143.3 108 62.0
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 7.7e-32 141.0 89 70.8
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 7.7e-32 141.0 99 65.7
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 1.0e-31 140.6 127 59.1
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 1.3e-31 140.2 139 54.0
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 3.8e-31 138.7 116 53.4
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 1.1e-30 137.1 112 55.4
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 1.1e-30 137.1 112 56.2
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 5.5e-30 134.8 72 76.4
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 9.4e-30 134.0 83 67.5
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 1.6e-29 133.3 72 79.2
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 1.6e-29 133.3 77 77.9
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 2.1e-29 132.9 169 46.7
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 2.7e-29 132.5 147 50.3
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 3.6e-29 132.1 71 77.5
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 2.3e-28 129.4 86 62.8
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 6.8e-28 127.9 65 83.1
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 4.4e-27 125.2 148 50.0
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 1.7e-26 123.2 73 74.0
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 3.7e-26 122.1 72 80.6
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 4.8e-26 121.7 67 80.6
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 1.4e-25 120.2 72 73.6
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 1.4e-25 120.2 123 50.4
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 5.4e-25 118.2 79 67.1
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 1.7e-23 113.2 72 63.9
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 2.1e-21 106.3 74 64.9
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 8.8e-20 100.9 65 67.7
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 3.4e-19 99.0 107 47.7
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 1.4e-17 93.6 63 58.7
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 9.2e-17 90.9 69 59.4
CBR_g19673 Chara braunii HOM05D007483 ORTHO05D009133 3.3e-06 55.8 37 64.9


User provided reference genes

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